RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 SAA2P0DJI9 122 aaPredicted RBP3.77□□□□□ -1.81
PTPN4-206ENST00000441089 HOXD3P31249 432 aaPredicted RBP3.77□□□□□ -1.81
PTPN4-206ENST00000441089 GPR12P47775 334 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 BCAP31P51572 246 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 TAS2R31P59538 309 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 CBX3Q13185 183 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 TMEM187Q14656 261 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 FCN2Q15485 313 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 MSMO1Q15800 293 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 HLA-DRB5Q30154 266 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 C4orf46Q504U0 113 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 ZNF585BQ52M93 769 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 TMEM128Q5BJH2 165 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 NCR3LG1Q68D85 454 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 LPCAT3Q6P1A2 487 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 C1orf122Q6ZSJ8 110 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 VMO1Q7Z5L0 202 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 LHFPL4Q7Z7J7 247 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 PDZD9Q8IXQ8 264 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 LINC00311Q8N616 119 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 C8orf31Q8N9H6 132 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 ZNF383Q8NA42 475 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 DRAXINQ8NBI3 349 aaPredicted RBP3.77□□□□□ -1.81
PTPN4-206ENST00000441089 OR2AK2Q8NG84 335 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 OR11H6Q8NGC7 330 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 OR11H7Q8NGC8 314 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 OR4P4Q8NGL7 312 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 OR51H1Q8NH63 302 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 OR5R1Q8NH85 324 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 OR9G1Q8NH87 305 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 CASTOR1Q8WTX7 329 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 MITD1Q8WV92 249 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 C17orf50Q8WW18 174 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 ST6GALNAC6Q969X2 333 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 GALNT14Q96FL9 552 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 ZNF486Q96H40 463 aaPredicted RBP3.77□□□□□ -1.81
PTPN4-206ENST00000441089 AKR1E2Q96JD6 320 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 SCGB3A2Q96PL1 93 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 ASCL2Q99929 193 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 MCRIP2Q9BUT9 160 aaKnown RBP3.77□□□□□ -1.81
PTPN4-206ENST00000441089 MRPL20Q9BYC9 149 aaKnown RBP3.77□□□□□ -1.81
PTPN4-206ENST00000441089 RANBP3Q9H6Z4 567 aaPredicted RBP3.77□□□□□ -1.81
PTPN4-206ENST00000441089 METTL8Q9H825 291 aaKnown RBP3.77□□□□□ -1.81
PTPN4-206ENST00000441089 RAB9BQ9NP90 201 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 C14orf166Q9Y224 244 aaKnown RBP3.77□□□□□ -1.81
PTPN4-206ENST00000441089 FAM96BQ9Y3D0 163 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 LSM4Q9Y4Z0 139 aaKnown RBP3.77□□□□□ -1.81
PTPN4-206ENST00000441089 RBM7Q9Y580 266 aaKnown RBP3.77□□□□□ -1.81
PTPN4-206ENST00000441089 KPTNQ9Y664 436 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 DSCAML1Q8TD84 2053 aa3.76□□□□□ -1.81
PTPN4-206ENST00000441089 A0A0B4J2A0 478 aa3.76□□□□□ -1.81
PTPN4-206ENST00000441089 A0A0G2JRQ6 117 aa3.76□□□□□ -1.81
PTPN4-206ENST00000441089 TEX13DA0A0J9YY54 714 aaPredicted RBP3.76□□□□□ -1.81
PTPN4-206ENST00000441089 C3orf85A0A1B0GTC6 90 aa3.76□□□□□ -1.81
PTPN4-206ENST00000441089 A0A1W2PPH5 198 aa3.76□□□□□ -1.81
PTPN4-206ENST00000441089 HMX3A6NHT5 357 aa3.76□□□□□ -1.81
PTPN4-206ENST00000441089 MPTX1A8MV57 137 aa3.76□□□□□ -1.81
PTPN4-206ENST00000441089 H0Y980 276 aa3.76□□□□□ -1.81
PTPN4-206ENST00000441089 BUB1B-PAK6H3BSN5 160 aa3.76□□□□□ -1.81
PTPN4-206ENST00000441089 CCSO14618 274 aa3.76□□□□□ -1.81
PTPN4-206ENST00000441089 RAB29O14966 203 aa3.76□□□□□ -1.81
PTPN4-206ENST00000441089 CREBL2O60519 120 aaPredicted RBP3.76□□□□□ -1.81
PTPN4-206ENST00000441089 RAMP3O60896 148 aa3.76□□□□□ -1.81
PTPN4-206ENST00000441089 ADAP1O75689 374 aa3.76□□□□□ -1.81
PTPN4-206ENST00000441089 SIX6O95475 246 aa3.76□□□□□ -1.81
PTPN4-206ENST00000441089 SULT1A3P0DMM9 295 aa3.76□□□□□ -1.81
PTPN4-206ENST00000441089 SULT1A4P0DMN0 295 aa3.76□□□□□ -1.81
PTPN4-206ENST00000441089 CT45A6P0DMU7 189 aa3.76□□□□□ -1.81
PTPN4-206ENST00000441089 CT45A5P0DMU8 189 aa3.76□□□□□ -1.81
PTPN4-206ENST00000441089 CT45A7P0DMV0 189 aa3.76□□□□□ -1.81
PTPN4-206ENST00000441089 CXCL3P19876 107 aa3.76□□□□□ -1.81
PTPN4-206ENST00000441089 F2RP25116 425 aa3.76□□□□□ -1.81
PTPN4-206ENST00000441089 UCP1P25874 307 aa3.76□□□□□ -1.81
PTPN4-206ENST00000441089 PAX6P26367 422 aa3.76□□□□□ -1.81
PTPN4-206ENST00000441089 DUTP33316 252 aaKnown RBP3.76□□□□□ -1.81
PTPN4-206ENST00000441089 REG1BP48304 166 aa3.76□□□□□ -1.81
PTPN4-206ENST00000441089 RAB7AP51149 207 aa3.76□□□□□ -1.81
PTPN4-206ENST00000441089 ZNF137PP52743 207 aa3.76□□□□□ -1.81
PTPN4-206ENST00000441089 RRAS2P62070 204 aaPredicted RBP3.76□□□□□ -1.81
PTPN4-206ENST00000441089 ABCA11PQ4W5N1 156 aa3.76□□□□□ -1.81
PTPN4-206ENST00000441089 OR2B11Q5JQS5 317 aa3.76□□□□□ -1.81
PTPN4-206ENST00000441089 ZNF833PQ6ZTB9 187 aa3.76□□□□□ -1.81
PTPN4-206ENST00000441089 KCTD9Q7L273 389 aa3.76□□□□□ -1.81
PTPN4-206ENST00000441089 SGPP2Q8IWX5 399 aa3.76□□□□□ -1.81
PTPN4-206ENST00000441089 SELENOHQ8IZQ5 122 aaKnown RBP3.76□□□□□ -1.81
PTPN4-206ENST00000441089 DYNAPQ8N1N2 210 aa3.76□□□□□ -1.81
PTPN4-206ENST00000441089 C12orf45Q8N5I9 185 aaPredicted RBP3.76□□□□□ -1.81
PTPN4-206ENST00000441089 CCDC71LQ8N9Z2 235 aa3.76□□□□□ -1.81
PTPN4-206ENST00000441089 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.76□□□□□ -1.81
PTPN4-206ENST00000441089 ZBTB34Q8NCN2 500 aa3.76□□□□□ -1.81
PTPN4-206ENST00000441089 GLYATL2Q8WU03 294 aa3.76□□□□□ -1.81
PTPN4-206ENST00000441089 LHX4Q969G2 390 aa3.76□□□□□ -1.81
PTPN4-206ENST00000441089 ST6GAL2Q96JF0 529 aa3.76□□□□□ -1.81
PTPN4-206ENST00000441089 NABP2Q9BQ15 211 aa3.76□□□□□ -1.81
PTPN4-206ENST00000441089 NEURL2Q9BR09 285 aa3.76□□□□□ -1.81
PTPN4-206ENST00000441089 PCGF1Q9BSM1 259 aa3.76□□□□□ -1.81
PTPN4-206ENST00000441089 CLEC7AQ9BXN2 247 aa3.76□□□□□ -1.81
PTPN4-206ENST00000441089 RAB18Q9NP72 206 aa3.76□□□□□ -1.81
PTPN4-206ENST00000441089 PIPOXQ9P0Z9 390 aa3.76□□□□□ -1.81
PTPN4-206ENST00000441089 SHPKQ9UHJ6 478 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms