RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 POU2AF1Q16633 256 aa10.54□□□□□ -0.72
LTBR-202ENST00000440421 RNASE10Q5GAN6 216 aaKnown RBP10.54□□□□□ -0.72
LTBR-202ENST00000440421 VAX1Q5SQQ9 334 aa10.54□□□□□ -0.72
LTBR-202ENST00000440421 LPCAT3Q6P1A2 487 aa10.54□□□□□ -0.72
LTBR-202ENST00000440421 FAM223AQ8IWN6 122 aa10.54□□□□□ -0.72
LTBR-202ENST00000440421 DYNC2LI1Q8TCX1 351 aa10.54□□□□□ -0.72
LTBR-202ENST00000440421 OR4C12Q96R67 309 aa10.54□□□□□ -0.72
LTBR-202ENST00000440421 RSRP1Q9BUV0 290 aa10.54□□□□□ -0.72
LTBR-202ENST00000440421 COMMD9Q9P000 198 aa10.54□□□□□ -0.72
LTBR-202ENST00000440421 MTFP1Q9UDX5 166 aa10.54□□□□□ -0.72
LTBR-202ENST00000440421 CGB1A6NKQ9 187 aa10.53□□□□□ -0.72
LTBR-202ENST00000440421 MARCH11A6NNE9 402 aa10.53□□□□□ -0.72
LTBR-202ENST00000440421 KRASP01116 189 aa10.53□□□□□ -0.72
LTBR-202ENST00000440421 CD3DP04234 171 aa10.53□□□□□ -0.72
LTBR-202ENST00000440421 PSMB6P28072 239 aa10.53□□□□□ -0.72
LTBR-202ENST00000440421 S100GP29377 79 aa10.53□□□□□ -0.72
LTBR-202ENST00000440421 G6PCP35575 357 aa10.53□□□□□ -0.72
LTBR-202ENST00000440421 SYNJ2BPP57105 145 aa10.53□□□□□ -0.72
LTBR-202ENST00000440421 OR2B8PP59922 312 aa10.53□□□□□ -0.72
LTBR-202ENST00000440421 C15orf32Q32M92 178 aa10.53□□□□□ -0.72
LTBR-202ENST00000440421 ZNF585BQ52M93 769 aa10.53□□□□□ -0.72
LTBR-202ENST00000440421 TBC1D26Q86UD7 250 aa10.53□□□□□ -0.72
LTBR-202ENST00000440421 HAPLN4Q86UW8 402 aa10.53□□□□□ -0.72
LTBR-202ENST00000440421 SLC38A6Q8IZM9 456 aa10.53□□□□□ -0.72
LTBR-202ENST00000440421 NECAP1Q8NC96 275 aa10.53□□□□□ -0.72
LTBR-202ENST00000440421 C15orf40Q8WUR7 153 aa10.53□□□□□ -0.72
LTBR-202ENST00000440421 BCL7BQ9BQE9 202 aa10.53□□□□□ -0.72
LTBR-202ENST00000440421 ELOVL1Q9BW60 279 aa10.53□□□□□ -0.72
LTBR-202ENST00000440421 COMMD5Q9GZQ3 224 aa10.53□□□□□ -0.72
LTBR-202ENST00000440421 CCDC59Q9P031 241 aaKnown RBP10.53□□□□□ -0.72
LTBR-202ENST00000440421 FBXL7Q9UJT9 491 aa10.53□□□□□ -0.72
LTBR-202ENST00000440421 S4R3C0 116 aa10.53□□□□□ -0.72
LTBR-202ENST00000440421 H3BMQ9 156 aa10.52□□□□□ -0.73
LTBR-202ENST00000440421 TPPPO94811 219 aa10.52□□□□□ -0.73
LTBR-202ENST00000440421 IGHV3-23P01764 117 aa10.52□□□□□ -0.73
LTBR-202ENST00000440421 DEFA4P12838 97 aa10.52□□□□□ -0.73
LTBR-202ENST00000440421 PGAM2P15259 253 aa10.52□□□□□ -0.73
LTBR-202ENST00000440421 SPNP16150 400 aa10.52□□□□□ -0.73
LTBR-202ENST00000440421 PI3P19957 117 aa10.52□□□□□ -0.73
LTBR-202ENST00000440421 UCP3P55916 312 aa10.52□□□□□ -0.73
LTBR-202ENST00000440421 KLF5Q13887 457 aaPredicted RBP10.52□□□□□ -0.73
LTBR-202ENST00000440421 RPEL1Q2QD12 228 aa10.52□□□□□ -0.73
LTBR-202ENST00000440421 OR4D10Q8NGI6 311 aa10.52□□□□□ -0.73
LTBR-202ENST00000440421 ISOC1Q96CN7 298 aa10.52□□□□□ -0.73
LTBR-202ENST00000440421 C6orf62Q9GZU0 229 aaPredicted RBP10.52□□□□□ -0.73
LTBR-202ENST00000440421 NSG2Q9Y328 171 aa10.52□□□□□ -0.73
LTBR-202ENST00000440421 GABARAPH6UMI1 98 aa10.51□□□□□ -0.73
LTBR-202ENST00000440421 BMPR1BO00238 502 aa10.51□□□□□ -0.73
LTBR-202ENST00000440421 NDUFB8O95169 186 aa10.51□□□□□ -0.73
LTBR-202ENST00000440421 DHFRP00374 187 aa10.51□□□□□ -0.73
LTBR-202ENST00000440421 CRYGCP07315 174 aa10.51□□□□□ -0.73
LTBR-202ENST00000440421 CTRB1P17538 263 aa10.51□□□□□ -0.73
LTBR-202ENST00000440421 PPP5CP53041 499 aa10.51□□□□□ -0.73
LTBR-202ENST00000440421 CD69Q07108 199 aa10.51□□□□□ -0.73
LTBR-202ENST00000440421 DCTN2Q13561 401 aaKnown RBP10.51□□□□□ -0.73
LTBR-202ENST00000440421 IL18Q14116 193 aa10.51□□□□□ -0.73
LTBR-202ENST00000440421 CTRB2Q6GPI1 263 aa10.51□□□□□ -0.73
LTBR-202ENST00000440421 TMEM229BQ8NBD8 167 aa10.51□□□□□ -0.73
LTBR-202ENST00000440421 OR10W1Q8NGF6 305 aa10.51□□□□□ -0.73
LTBR-202ENST00000440421 OR9G4Q8NGQ1 327 aa10.51□□□□□ -0.73
LTBR-202ENST00000440421 OR6Q1Q8NGQ2 317 aa10.51□□□□□ -0.73
LTBR-202ENST00000440421 DIRAS2Q96HU8 199 aa10.51□□□□□ -0.73
LTBR-202ENST00000440421 FANCD2OSQ96PS1 177 aa10.51□□□□□ -0.73
LTBR-202ENST00000440421 LSM4Q9Y4Z0 139 aaKnown RBP10.51□□□□□ -0.73
LTBR-202ENST00000440421 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.5□□□□□ -0.73
LTBR-202ENST00000440421 TEX50A0A1B0GTY4 177 aa10.5□□□□□ -0.73
LTBR-202ENST00000440421 IGLC7A0M8Q6 106 aa10.5□□□□□ -0.73
LTBR-202ENST00000440421 PPP5D1E7EU14 171 aa10.5□□□□□ -0.73
LTBR-202ENST00000440421 SNAPC5O75971 98 aa10.5□□□□□ -0.73
LTBR-202ENST00000440421 RAB3DO95716 219 aa10.5□□□□□ -0.73
LTBR-202ENST00000440421 TBPP20226 339 aa10.5□□□□□ -0.73
LTBR-202ENST00000440421 TAS2R19P59542 299 aa10.5□□□□□ -0.73
LTBR-202ENST00000440421 TATDN3Q17R31 274 aa10.5□□□□□ -0.73
LTBR-202ENST00000440421 SCGB2B2Q4G0G5 96 aa10.5□□□□□ -0.73
LTBR-202ENST00000440421 STEAP1BQ6NZ63 245 aa10.5□□□□□ -0.73
LTBR-202ENST00000440421 LHFPL1Q86WI0 220 aa10.5□□□□□ -0.73
LTBR-202ENST00000440421 ARRDC1Q8N5I2 433 aa10.5□□□□□ -0.73
LTBR-202ENST00000440421 B9D2Q9BPU9 175 aa10.5□□□□□ -0.73
LTBR-202ENST00000440421 HINT2Q9BX68 163 aa10.5□□□□□ -0.73
LTBR-202ENST00000440421 QTRT1Q9BXR0 403 aaKnown RBP10.5□□□□□ -0.73
LTBR-202ENST00000440421 SLIRPQ9GZT3 109 aaKnown RBP10.5□□□□□ -0.73
LTBR-202ENST00000440421 CEPT1Q9Y6K0 416 aa10.5□□□□□ -0.73
LTBR-202ENST00000440421 IGLV11-55A0A075B6I3 123 aa10.49□□□□□ -0.73
LTBR-202ENST00000440421 CCDC160A6NGH7 325 aa10.49□□□□□ -0.73
LTBR-202ENST00000440421 HLA-AP01891 365 aaKnown RBP10.49□□□□□ -0.73
LTBR-202ENST00000440421 CD74P04233 296 aa10.49□□□□□ -0.73
LTBR-202ENST00000440421 TRAPPC2P0DI81 140 aa10.49□□□□□ -0.73
LTBR-202ENST00000440421 TRAPPC2BP0DI82 140 aa10.49□□□□□ -0.73
LTBR-202ENST00000440421 GP9P14770 177 aa10.49□□□□□ -0.73
LTBR-202ENST00000440421 HIST1H1BP16401 226 aaKnown RBP10.49□□□□□ -0.73
LTBR-202ENST00000440421 PIGPP57054 158 aa10.49□□□□□ -0.73
LTBR-202ENST00000440421 MRPS10P82664 201 aaKnown RBP10.49□□□□□ -0.73
LTBR-202ENST00000440421 FAAP20Q6NZ36 180 aa10.49□□□□□ -0.73
LTBR-202ENST00000440421 CLEC19AQ6UXS0 136 aa10.49□□□□□ -0.73
LTBR-202ENST00000440421 OR1L8Q8NGR8 309 aa10.49□□□□□ -0.73
LTBR-202ENST00000440421 SMIM4Q8WVI0 70 aa10.49□□□□□ -0.73
LTBR-202ENST00000440421 OR51B2Q9Y5P1 312 aa10.49□□□□□ -0.73
LTBR-202ENST00000440421 IGKV1-39P01597 117 aa10.48□□□□□ -0.73
LTBR-202ENST00000440421 IGLV1-51P01701 117 aa10.48□□□□□ -0.73
LTBR-202ENST00000440421 IGKV1D-39P04432 117 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms