RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 HECTD1Q9ULT8 2610 aa12.22□□□□□ -0.45
CPSF7-205ENST00000439958 C15orf61A6NNL5 157 aa12.21□□□□□ -0.45
CPSF7-205ENST00000439958 SULT1A2P50226 295 aa12.21□□□□□ -0.45
CPSF7-205ENST00000439958 RAB13P51153 203 aa12.21□□□□□ -0.45
CPSF7-205ENST00000439958 FGF8P55075 233 aaPredicted RBP12.21□□□□□ -0.45
CPSF7-205ENST00000439958 BLOC1S1P78537 153 aa12.21□□□□□ -0.45
CPSF7-205ENST00000439958 TNXAQ16473 311 aa12.21□□□□□ -0.45
CPSF7-205ENST00000439958 CLEC2AQ6UVW9 174 aa12.21□□□□□ -0.45
CPSF7-205ENST00000439958 MAPK1IP1LQ8NDC0 245 aa12.21□□□□□ -0.45
CPSF7-205ENST00000439958 BUB1B-PAK6H3BSN5 160 aa12.21□□□□□ -0.45
CPSF7-205ENST00000439958 HSPE1P61604 102 aaKnown RBP12.21□□□□□ -0.45
CPSF7-205ENST00000439958 RPL8P62917 257 aaKnown RBP12.21□□□□□ -0.45
CPSF7-205ENST00000439958 VMO1Q7Z5L0 202 aa12.21□□□□□ -0.45
CPSF7-205ENST00000439958 MFSD2BA6NFX1 497 aa12.21□□□□□ -0.46
CPSF7-205ENST00000439958 TIMM23O14925 209 aa12.21□□□□□ -0.46
CPSF7-205ENST00000439958 KBTBD11O94819 623 aa12.21□□□□□ -0.46
CPSF7-205ENST00000439958 SPP1P10451 314 aa12.21□□□□□ -0.46
CPSF7-205ENST00000439958 IGFBP2P18065 325 aa12.21□□□□□ -0.46
CPSF7-205ENST00000439958 BPIFCQ8NFQ6 507 aa12.21□□□□□ -0.46
CPSF7-205ENST00000439958 FAM210AQ96ND0 272 aa12.21□□□□□ -0.46
CPSF7-205ENST00000439958 GINS3Q9BRX5 216 aa12.21□□□□□ -0.46
CPSF7-205ENST00000439958 IGHV3-21A0A0B4J1V1 117 aa12.2□□□□□ -0.46
CPSF7-205ENST00000439958 NCBP2LA6PVI3 153 aaKnown RBP12.2□□□□□ -0.46
CPSF7-205ENST00000439958 SEC11BP0C7V7 166 aa12.2□□□□□ -0.46
CPSF7-205ENST00000439958 P0C879 139 aa12.2□□□□□ -0.46
CPSF7-205ENST00000439958 PDLIM4P50479 330 aa12.2□□□□□ -0.46
CPSF7-205ENST00000439958 PPT1P50897 306 aa12.2□□□□□ -0.46
CPSF7-205ENST00000439958 MMDQ15546 238 aa12.2□□□□□ -0.46
CPSF7-205ENST00000439958 VMA21Q3ZAQ7 101 aa12.2□□□□□ -0.46
CPSF7-205ENST00000439958 GNPNAT1Q96EK6 184 aaPredicted RBP12.2□□□□□ -0.46
CPSF7-205ENST00000439958 CNIH1O95406 144 aa12.2□□□□□ -0.46
CPSF7-205ENST00000439958 FGF2P09038 288 aa12.2□□□□□ -0.46
CPSF7-205ENST00000439958 NPY1RP25929 384 aa12.2□□□□□ -0.46
CPSF7-205ENST00000439958 RAB11AP62491 216 aa12.2□□□□□ -0.46
CPSF7-205ENST00000439958 SLC24A4Q8NFF2 622 aa12.2□□□□□ -0.46
CPSF7-205ENST00000439958 FBXL15Q9H469 300 aa12.2□□□□□ -0.46
CPSF7-205ENST00000439958 VSIRQ9H7M9 311 aa12.2□□□□□ -0.46
CPSF7-205ENST00000439958 CACFD1Q9UGQ2 172 aa12.2□□□□□ -0.46
CPSF7-205ENST00000439958 PRNDQ9UKY0 176 aa12.2□□□□□ -0.46
CPSF7-205ENST00000439958 TET2Q6N021 2002 aaPredicted RBP12.2□□□□□ -0.46
CPSF7-205ENST00000439958 IGHV1-3A0A0C4DH29 117 aa12.2□□□□□ -0.46
CPSF7-205ENST00000439958 NUPL2O15504 423 aaKnown RBP12.2□□□□□ -0.46
CPSF7-205ENST00000439958 HAGHQ16775 308 aa12.2□□□□□ -0.46
CPSF7-205ENST00000439958 HCP5Q6MZN7 132 aa12.2□□□□□ -0.46
CPSF7-205ENST00000439958 SSMEM1Q8WWF3 244 aa12.2□□□□□ -0.46
CPSF7-205ENST00000439958 SOX15O60248 233 aa12.19□□□□□ -0.46
CPSF7-205ENST00000439958 CA2P00918 260 aa12.19□□□□□ -0.46
CPSF7-205ENST00000439958 H2AFB1P0C5Y9 115 aa12.19□□□□□ -0.46
CPSF7-205ENST00000439958 RPP30P78346 268 aaKnown RBP12.19□□□□□ -0.46
CPSF7-205ENST00000439958 STPG2Q8N412 459 aa12.19□□□□□ -0.46
CPSF7-205ENST00000439958 OSR1Q8TAX0 266 aaPredicted RBP12.19□□□□□ -0.46
CPSF7-205ENST00000439958 OR13C7P0DN81 318 aa12.19□□□□□ -0.46
CPSF7-205ENST00000439958 M6PRP20645 277 aa12.19□□□□□ -0.46
CPSF7-205ENST00000439958 DHRS7BQ6IAN0 325 aaPredicted RBP12.19□□□□□ -0.46
CPSF7-205ENST00000439958 Q8N7P7 452 aa12.19□□□□□ -0.46
CPSF7-205ENST00000439958 OR5AN1Q8NGI8 311 aa12.19□□□□□ -0.46
CPSF7-205ENST00000439958 OR4P4Q8NGL7 312 aa12.19□□□□□ -0.46
CPSF7-205ENST00000439958 C17orf50Q8WW18 174 aa12.19□□□□□ -0.46
CPSF7-205ENST00000439958 METTL1Q9UBP6 276 aaKnown RBP12.19□□□□□ -0.46
CPSF7-205ENST00000439958 C15orf62A8K5M9 175 aa12.19□□□□□ -0.46
CPSF7-205ENST00000439958 F8W036 122 aa12.19□□□□□ -0.46
CPSF7-205ENST00000439958 UPK2O00526 184 aa12.19□□□□□ -0.46
CPSF7-205ENST00000439958 TOX4O94842 621 aa12.19□□□□□ -0.46
CPSF7-205ENST00000439958 TAS2R30P59541 319 aa12.19□□□□□ -0.46
CPSF7-205ENST00000439958 TUSC1Q2TAM9 212 aa12.19□□□□□ -0.46
CPSF7-205ENST00000439958 HIST2H2BCQ6DN03 193 aa12.19□□□□□ -0.46
CPSF7-205ENST00000439958 ZNF430Q9H8G1 570 aaPredicted RBP12.19□□□□□ -0.46
CPSF7-205ENST00000439958 AMMECR1Q9Y4X0 333 aaPredicted RBP12.19□□□□□ -0.46
CPSF7-205ENST00000439958 UBR5O95071 2799 aaPredicted RBP12.18□□□□□ -0.46
CPSF7-205ENST00000439958 BTNL8Q6UX41 500 aa12.18□□□□□ -0.46
CPSF7-205ENST00000439958 TMEM14EPQ6UXP3 125 aa12.18□□□□□ -0.46
CPSF7-205ENST00000439958 C19orf35Q6ZS72 473 aa12.18□□□□□ -0.46
CPSF7-205ENST00000439958 CCDC28AQ8IWP9 274 aa12.18□□□□□ -0.46
CPSF7-205ENST00000439958 ACY3Q96HD9 319 aa12.18□□□□□ -0.46
CPSF7-205ENST00000439958 PIMREGQ9BSJ6 248 aa12.18□□□□□ -0.46
CPSF7-205ENST00000439958 TMEM147Q9BVK8 224 aa12.18□□□□□ -0.46
CPSF7-205ENST00000439958 REG4Q9BYZ8 158 aa12.18□□□□□ -0.46
CPSF7-205ENST00000439958 SLC25A22Q9H936 323 aa12.18□□□□□ -0.46
CPSF7-205ENST00000439958 IGKV1D-33P01593 117 aa12.18□□□□□ -0.46
CPSF7-205ENST00000439958 IGKV1-33P01594 117 aa12.18□□□□□ -0.46
CPSF7-205ENST00000439958 IGHV2-5P01817 119 aa12.18□□□□□ -0.46
CPSF7-205ENST00000439958 PDLIM3Q53GG5 364 aaPredicted RBP12.18□□□□□ -0.46
CPSF7-205ENST00000439958 PDPNQ86YL7 162 aa12.18□□□□□ -0.46
CPSF7-205ENST00000439958 TAF15Q92804 592 aaKnown RBP eCLIP12.18□□□□□ -0.46
CPSF7-205ENST00000439958 BARX1Q9HBU1 254 aaPredicted RBP12.18□□□□□ -0.46
CPSF7-205ENST00000439958 DPM3Q9P2X0 92 aa12.18□□□□□ -0.46
CPSF7-205ENST00000439958 MC5RP33032 325 aa12.17□□□□□ -0.46
CPSF7-205ENST00000439958 MLANAQ16655 118 aa12.17□□□□□ -0.46
CPSF7-205ENST00000439958 ZNF787Q6DD87 383 aa12.17□□□□□ -0.46
CPSF7-205ENST00000439958 AIFM2Q9BRQ8 373 aa12.17□□□□□ -0.46
CPSF7-205ENST00000439958 IGHV4-61A0A0C4DH41 118 aa12.17□□□□□ -0.46
CPSF7-205ENST00000439958 TEX50A0A1B0GTY4 177 aa12.17□□□□□ -0.46
CPSF7-205ENST00000439958 ZFP92A6NM28 416 aa12.17□□□□□ -0.46
CPSF7-205ENST00000439958 GAB2Q9UQC2 676 aa12.17□□□□□ -0.46
CPSF7-205ENST00000439958 E7EUB6 86 aa12.17□□□□□ -0.46
CPSF7-205ENST00000439958 FGF16O43320 207 aa12.17□□□□□ -0.46
CPSF7-205ENST00000439958 IGLV1-47P01700 117 aa12.17□□□□□ -0.46
CPSF7-205ENST00000439958 CD1BP29016 333 aa12.17□□□□□ -0.46
CPSF7-205ENST00000439958 FFAR4Q5NUL3 377 aa12.17□□□□□ -0.46
CPSF7-205ENST00000439958 ST6GALNAC6Q969X2 333 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms