RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 ADAD2Q8NCV1 583 aaKnown RBP9.19□□□□□ -0.94
HSPG2-206ENST00000439717 MS4A10Q96PG2 267 aa9.19□□□□□ -0.94
HSPG2-206ENST00000439717 P2RX4Q99571 388 aa9.19□□□□□ -0.94
HSPG2-206ENST00000439717 TSC22D3Q99576 134 aa9.19□□□□□ -0.94
HSPG2-206ENST00000439717 SRSF8Q9BRL6 282 aaKnown RBP9.19□□□□□ -0.94
HSPG2-206ENST00000439717 RTBDNQ9BSG5 229 aaPredicted RBP9.19□□□□□ -0.94
HSPG2-206ENST00000439717 BATF3Q9NR55 127 aa9.19□□□□□ -0.94
HSPG2-206ENST00000439717 ZNF355PQ9NSJ1 428 aa9.19□□□□□ -0.94
HSPG2-206ENST00000439717 GPR132Q9UNW8 380 aa9.19□□□□□ -0.94
HSPG2-206ENST00000439717 PLXNB1O43157 2135 aa9.19□□□□□ -0.94
HSPG2-206ENST00000439717 A0A0G2JLM5 398 aa9.18□□□□□ -0.94
HSPG2-206ENST00000439717 TEX22C9J3V5 150 aa9.18□□□□□ -0.94
HSPG2-206ENST00000439717 I3L521 148 aa9.18□□□□□ -0.94
HSPG2-206ENST00000439717 SNAPC5O75971 98 aa9.18□□□□□ -0.94
HSPG2-206ENST00000439717 ATG12O94817 140 aa9.18□□□□□ -0.94
HSPG2-206ENST00000439717 TRGV3P03979 118 aa9.18□□□□□ -0.94
HSPG2-206ENST00000439717 CD33P20138 364 aa9.18□□□□□ -0.94
HSPG2-206ENST00000439717 G6PCP35575 357 aa9.18□□□□□ -0.94
HSPG2-206ENST00000439717 TRIQKQ629K1 86 aa9.18□□□□□ -0.94
HSPG2-206ENST00000439717 THOC7Q6I9Y2 204 aaKnown RBP9.18□□□□□ -0.94
HSPG2-206ENST00000439717 MRPL41Q8IXM3 137 aaKnown RBP9.18□□□□□ -0.94
HSPG2-206ENST00000439717 LINC00482Q8N8I6 264 aa9.18□□□□□ -0.94
HSPG2-206ENST00000439717 CASTOR1Q8WTX7 329 aa9.18□□□□□ -0.94
HSPG2-206ENST00000439717 RAX2Q96IS3 184 aa9.18□□□□□ -0.94
HSPG2-206ENST00000439717 SEC22AQ96IW7 307 aa9.18□□□□□ -0.94
HSPG2-206ENST00000439717 FYTTD1Q96QD9 318 aaKnown RBP9.18□□□□□ -0.94
HSPG2-206ENST00000439717 TP53RKQ96S44 253 aa9.18□□□□□ -0.94
HSPG2-206ENST00000439717 COMMD5Q9GZQ3 224 aa9.18□□□□□ -0.94
HSPG2-206ENST00000439717 C5orf66Q9H5L9 145 aa9.18□□□□□ -0.94
HSPG2-206ENST00000439717 GNB4Q9HAV0 340 aa9.18□□□□□ -0.94
HSPG2-206ENST00000439717 COA4Q9NYJ1 87 aa9.18□□□□□ -0.94
HSPG2-206ENST00000439717 FKBP11Q9NYL4 201 aa9.18□□□□□ -0.94
HSPG2-206ENST00000439717 TRAV3A0A0B4J244 114 aa9.17□□□□□ -0.94
HSPG2-206ENST00000439717 TEX13DA0A0J9YY54 714 aaPredicted RBP9.17□□□□□ -0.94
HSPG2-206ENST00000439717 NPIPB5A8MRT5 1133 aa9.17□□□□□ -0.94
HSPG2-206ENST00000439717 E7EUB6 86 aa9.17□□□□□ -0.94
HSPG2-206ENST00000439717 IGKV1-39P01597 117 aa9.17□□□□□ -0.94
HSPG2-206ENST00000439717 IGKV1D-39P04432 117 aa9.17□□□□□ -0.94
HSPG2-206ENST00000439717 CRYGCP07315 174 aa9.17□□□□□ -0.94
HSPG2-206ENST00000439717 LGALS1P09382 135 aaKnown RBP9.17□□□□□ -0.94
HSPG2-206ENST00000439717 APELAP0DMC3 54 aa9.17□□□□□ -0.94
HSPG2-206ENST00000439717 UCP1P25874 307 aa9.17□□□□□ -0.94
HSPG2-206ENST00000439717 INPP1P49441 399 aa9.17□□□□□ -0.94
HSPG2-206ENST00000439717 OR2B8PP59922 312 aa9.17□□□□□ -0.94
HSPG2-206ENST00000439717 BAK1Q16611 211 aa9.17□□□□□ -0.94
HSPG2-206ENST00000439717 CNPY1Q3B7I2 92 aa9.17□□□□□ -0.94
HSPG2-206ENST00000439717 ZNF57Q68EA5 555 aaPredicted RBP9.17□□□□□ -0.94
HSPG2-206ENST00000439717 H2BFWTQ7Z2G1 175 aa9.17□□□□□ -0.94
HSPG2-206ENST00000439717 HSD17B13Q7Z5P4 300 aaPredicted RBP9.17□□□□□ -0.94
HSPG2-206ENST00000439717 OR1L8Q8NGR8 309 aa9.17□□□□□ -0.94
HSPG2-206ENST00000439717 USMG5Q96IX5 58 aa9.17□□□□□ -0.94
HSPG2-206ENST00000439717 SLC25A21Q9BQT8 299 aaPredicted RBP9.17□□□□□ -0.94
HSPG2-206ENST00000439717 NAA60Q9H7X0 242 aa9.17□□□□□ -0.94
HSPG2-206ENST00000439717 PRNDQ9UKY0 176 aa9.17□□□□□ -0.94
HSPG2-206ENST00000439717 ZNF257Q9Y2Q1 563 aa9.17□□□□□ -0.94
HSPG2-206ENST00000439717 MGAM2Q2M2H8 2515 aa9.17□□□□□ -0.94
HSPG2-206ENST00000439717 NBEAL1Q6ZS30 2694 aa9.16□□□□□ -0.94
HSPG2-206ENST00000439717 TEX50A0A1B0GTY4 177 aa9.16□□□□□ -0.94
HSPG2-206ENST00000439717 C13orf42A0A1B0GVH6 325 aa9.16□□□□□ -0.94
HSPG2-206ENST00000439717 A0A1B0GW64 132 aa9.16□□□□□ -0.94
HSPG2-206ENST00000439717 NAP1L6A6NFF2 107 aa9.16□□□□□ -0.94
HSPG2-206ENST00000439717 HMX3A6NHT5 357 aa9.16□□□□□ -0.94
HSPG2-206ENST00000439717 CRYM-AS1A6NIL9 109 aa9.16□□□□□ -0.94
HSPG2-206ENST00000439717 CGB1A6NKQ9 187 aa9.16□□□□□ -0.94
HSPG2-206ENST00000439717 FAM223BA6NKX1 122 aa9.16□□□□□ -0.94
HSPG2-206ENST00000439717 DUS4LO95620 317 aaKnown RBP9.16□□□□□ -0.94
HSPG2-206ENST00000439717 DHFRP00374 187 aa9.16□□□□□ -0.94
HSPG2-206ENST00000439717 OR8U8P0C7N1 319 aa9.16□□□□□ -0.94
HSPG2-206ENST00000439717 PSMB6P28072 239 aa9.16□□□□□ -0.94
HSPG2-206ENST00000439717 DHODHQ02127 395 aa9.16□□□□□ -0.94
HSPG2-206ENST00000439717 ZNF616Q08AN1 781 aa9.16□□□□□ -0.94
HSPG2-206ENST00000439717 FHL3Q13643 280 aa9.16□□□□□ -0.94
HSPG2-206ENST00000439717 TRIM16LQ309B1 348 aa9.16□□□□□ -0.94
HSPG2-206ENST00000439717 DEFB136Q30KP8 78 aa9.16□□□□□ -0.94
HSPG2-206ENST00000439717 FAM223AQ8IWN6 122 aa9.16□□□□□ -0.94
HSPG2-206ENST00000439717 SGPP2Q8IWX5 399 aa9.16□□□□□ -0.94
HSPG2-206ENST00000439717 OR11H1Q8NG94 326 aa9.16□□□□□ -0.94
HSPG2-206ENST00000439717 OR1N2Q8NGR9 330 aa9.16□□□□□ -0.94
HSPG2-206ENST00000439717 OR5B3Q8NH48 314 aa9.16□□□□□ -0.94
HSPG2-206ENST00000439717 RCC1LQ96I51 464 aaKnown RBP9.16□□□□□ -0.94
HSPG2-206ENST00000439717 SDHCQ99643 169 aaPredicted RBP9.16□□□□□ -0.94
HSPG2-206ENST00000439717 QTRT1Q9BXR0 403 aaKnown RBP9.16□□□□□ -0.94
HSPG2-206ENST00000439717 TMEM222Q9H0R3 208 aa9.16□□□□□ -0.94
HSPG2-206ENST00000439717 WNK1Q9H4A3 2382 aa9.16□□□□□ -0.94
HSPG2-206ENST00000439717 TRBV9A0A0B4J1U6 114 aa9.15□□□□□ -0.94
HSPG2-206ENST00000439717 C15orf61A6NNL5 157 aa9.15□□□□□ -0.94
HSPG2-206ENST00000439717 CDS2O95674 445 aa9.15□□□□□ -0.94
HSPG2-206ENST00000439717 OR5AC1P0C628 307 aa9.15□□□□□ -0.94
HSPG2-206ENST00000439717 TRAPPC2P0DI81 140 aa9.15□□□□□ -0.94
HSPG2-206ENST00000439717 TRAPPC2BP0DI82 140 aa9.15□□□□□ -0.94
HSPG2-206ENST00000439717 MYOD1P15172 320 aa9.15□□□□□ -0.94
HSPG2-206ENST00000439717 CTRB1P17538 263 aa9.15□□□□□ -0.94
HSPG2-206ENST00000439717 KLK9Q2XQG4 91 aa9.15□□□□□ -0.94
HSPG2-206ENST00000439717 SP6Q3SY56 376 aa9.15□□□□□ -0.94
HSPG2-206ENST00000439717 SAMD5Q5TGI4 173 aa9.15□□□□□ -0.94
HSPG2-206ENST00000439717 CTRB2Q6GPI1 263 aa9.15□□□□□ -0.94
HSPG2-206ENST00000439717 NECAP1Q8NC96 275 aa9.15□□□□□ -0.94
HSPG2-206ENST00000439717 OR4A16Q8NH70 328 aa9.15□□□□□ -0.94
HSPG2-206ENST00000439717 DPF1Q92782 380 aa9.15□□□□□ -0.94
HSPG2-206ENST00000439717 GALNT14Q96FL9 552 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms