RNA–Protein interactions for RNA: ENST00000439541.6

CBX5-202, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-202ENST00000439541 HIF1ANQ9NWT6 349 aa8.12□□□□□ -1.11
CBX5-202ENST00000439541 CREBBPQ92793 2442 aa8.12□□□□□ -1.11
CBX5-202ENST00000439541 RAB29O14966 203 aa8.11□□□□□ -1.11
CBX5-202ENST00000439541 RAMP3O60896 148 aa8.11□□□□□ -1.11
CBX5-202ENST00000439541 ARG1P05089 322 aa8.11□□□□□ -1.11
CBX5-202ENST00000439541 RAB5AP20339 215 aa8.11□□□□□ -1.11
CBX5-202ENST00000439541 F2RP25116 425 aa8.11□□□□□ -1.11
CBX5-202ENST00000439541 SNRPEP62304 92 aaKnown RBP8.11□□□□□ -1.11
CBX5-202ENST00000439541 SOHLH1Q5JUK2 328 aa8.11□□□□□ -1.11
CBX5-202ENST00000439541 NCR3LG1Q68D85 454 aa8.11□□□□□ -1.11
CBX5-202ENST00000439541 TMEM182Q6ZP80 229 aaPredicted RBP8.11□□□□□ -1.11
CBX5-202ENST00000439541 LHFPL4Q7Z7J7 247 aa8.11□□□□□ -1.11
CBX5-202ENST00000439541 ZFP82Q8N141 532 aa8.11□□□□□ -1.11
CBX5-202ENST00000439541 LINC01356Q8N9X3 169 aa8.11□□□□□ -1.11
CBX5-202ENST00000439541 OR13D1Q8NGV5 346 aa8.11□□□□□ -1.11
CBX5-202ENST00000439541 OR2G3Q8NGZ4 309 aa8.11□□□□□ -1.11
CBX5-202ENST00000439541 ZNF596Q8TC21 504 aa8.11□□□□□ -1.11
CBX5-202ENST00000439541 TMEM186Q96B77 213 aa8.11□□□□□ -1.11
CBX5-202ENST00000439541 BSCL2Q96G97 398 aaPredicted RBP8.11□□□□□ -1.11
CBX5-202ENST00000439541 C1orf159Q96HA4 380 aa8.11□□□□□ -1.11
CBX5-202ENST00000439541 HIPK2Q9H2X6 1198 aa8.11□□□□□ -1.11
CBX5-202ENST00000439541 C11orf1Q9H5F2 150 aa8.11□□□□□ -1.11
CBX5-202ENST00000439541 METTL1Q9UBP6 276 aaKnown RBP8.11□□□□□ -1.11
CBX5-202ENST00000439541 ODF3BA8MYP8 253 aa8.1□□□□□ -1.11
CBX5-202ENST00000439541 EIF3GO75821 320 aaKnown RBP eCLIP8.1□□□□□ -1.11
CBX5-202ENST00000439541 IFNA17P01571 189 aa8.1□□□□□ -1.11
CBX5-202ENST00000439541 HBE1P02100 147 aa8.1□□□□□ -1.11
CBX5-202ENST00000439541 UCP1P25874 307 aa8.1□□□□□ -1.11
CBX5-202ENST00000439541 DUTP33316 252 aaKnown RBP8.1□□□□□ -1.11
CBX5-202ENST00000439541 MAS1LP35410 378 aa8.1□□□□□ -1.11
CBX5-202ENST00000439541 SULT1A1P50225 295 aa8.1□□□□□ -1.11
CBX5-202ENST00000439541 BRWD1-AS2P59051 145 aa8.1□□□□□ -1.11
CBX5-202ENST00000439541 PAX8Q06710 450 aa8.1□□□□□ -1.11
CBX5-202ENST00000439541 RUSC1-AS1Q66K80 236 aa8.1□□□□□ -1.11
CBX5-202ENST00000439541 CLEC9AQ6UXN8 241 aa8.1□□□□□ -1.11
CBX5-202ENST00000439541 ZNF833PQ6ZTB9 187 aa8.1□□□□□ -1.11
CBX5-202ENST00000439541 SELENOHQ8IZQ5 122 aaKnown RBP8.1□□□□□ -1.11
CBX5-202ENST00000439541 LINC00311Q8N616 119 aa8.1□□□□□ -1.11
CBX5-202ENST00000439541 ZNF383Q8NA42 475 aa8.1□□□□□ -1.11
CBX5-202ENST00000439541 CD300LFQ8TDQ1 290 aa8.1□□□□□ -1.11
CBX5-202ENST00000439541 SH3BGRL3Q9H299 93 aa8.1□□□□□ -1.11
CBX5-202ENST00000439541 KIAA1456Q9P272 454 aa8.1□□□□□ -1.11
CBX5-202ENST00000439541 NOTCH2Q04721 2471 aa8.1□□□□□ -1.11
CBX5-202ENST00000439541 WNK2Q9Y3S1 2297 aa8.1□□□□□ -1.11
CBX5-202ENST00000439541 TRAV40A0A0B4J280 105 aa8.1□□□□□ -1.11
CBX5-202ENST00000439541 RBFOX3A6NFN3 312 aa8.1□□□□□ -1.11
CBX5-202ENST00000439541 H0Y980 276 aa8.1□□□□□ -1.11
CBX5-202ENST00000439541 WRBO00258 174 aa8.1□□□□□ -1.11
CBX5-202ENST00000439541 DFFBO76075 338 aa8.1□□□□□ -1.11
CBX5-202ENST00000439541 TGFAP01135 160 aa8.1□□□□□ -1.11
CBX5-202ENST00000439541 AVPP01185 164 aa8.1□□□□□ -1.11
CBX5-202ENST00000439541 SLC25A6P12236 298 aa8.1□□□□□ -1.11
CBX5-202ENST00000439541 ATP6V0CP27449 155 aa8.1□□□□□ -1.11
CBX5-202ENST00000439541 ID3Q02535 119 aa8.1□□□□□ -1.11
CBX5-202ENST00000439541 ZNF816Q0VGE8 651 aaPredicted RBP8.1□□□□□ -1.11
CBX5-202ENST00000439541 C1QL4Q86Z23 238 aa8.1□□□□□ -1.11
CBX5-202ENST00000439541 TMEM252Q8N6L7 170 aa8.1□□□□□ -1.11
CBX5-202ENST00000439541 C8orf31Q8N9H6 132 aa8.1□□□□□ -1.11
CBX5-202ENST00000439541 BEND2Q8NDZ0 799 aa8.1□□□□□ -1.11
CBX5-202ENST00000439541 OR11H6Q8NGC7 330 aa8.1□□□□□ -1.11
CBX5-202ENST00000439541 ST6GALNAC6Q969X2 333 aa8.1□□□□□ -1.11
CBX5-202ENST00000439541 LIN7CQ9NUP9 197 aaKnown RBP8.1□□□□□ -1.11
CBX5-202ENST00000439541 FBXO7Q9Y3I1 522 aa8.1□□□□□ -1.11
CBX5-202ENST00000439541 FLNAP21333 2647 aaKnown RBP8.09□□□□□ -1.11
CBX5-202ENST00000439541 BAHCC1Q9P281 2608 aa8.09□□□□□ -1.11
CBX5-202ENST00000439541 IGHV3-72A0A0B4J1Y9 119 aa8.09□□□□□ -1.11
CBX5-202ENST00000439541 TRAV20A0A0B4J274 112 aa8.09□□□□□ -1.11
CBX5-202ENST00000439541 IGSF23A1L1A6 192 aa8.09□□□□□ -1.11
CBX5-202ENST00000439541 FAM24AA6NFZ4 105 aa8.09□□□□□ -1.11
CBX5-202ENST00000439541 BUB1B-PAK6H3BSN5 160 aa8.09□□□□□ -1.11
CBX5-202ENST00000439541 SSSCA1O60232 199 aa8.09□□□□□ -1.11
CBX5-202ENST00000439541 FCGR3BO75015 233 aa8.09□□□□□ -1.11
CBX5-202ENST00000439541 IGKV1-39P01597 117 aa8.09□□□□□ -1.11
CBX5-202ENST00000439541 IGKV1D-39P04432 117 aa8.09□□□□□ -1.11
CBX5-202ENST00000439541 CT45A6P0DMU7 189 aa8.09□□□□□ -1.11
CBX5-202ENST00000439541 CT45A5P0DMU8 189 aa8.09□□□□□ -1.11
CBX5-202ENST00000439541 CT45A7P0DMV0 189 aa8.09□□□□□ -1.11
CBX5-202ENST00000439541 IGHV4-38-2P0DP08 117 aa8.09□□□□□ -1.11
CBX5-202ENST00000439541 FHITP49789 147 aa8.09□□□□□ -1.11
CBX5-202ENST00000439541 MSMO1Q15800 293 aa8.09□□□□□ -1.11
CBX5-202ENST00000439541 ZNF585BQ52M93 769 aa8.09□□□□□ -1.11
CBX5-202ENST00000439541 NMSQ5H8A3 153 aa8.09□□□□□ -1.11
CBX5-202ENST00000439541 C1orf122Q6ZSJ8 110 aa8.09□□□□□ -1.11
CBX5-202ENST00000439541 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.09□□□□□ -1.11
CBX5-202ENST00000439541 ZBTB34Q8NCN2 500 aa8.09□□□□□ -1.11
CBX5-202ENST00000439541 FAM216AQ8WUB2 273 aa8.09□□□□□ -1.11
CBX5-202ENST00000439541 DDB2Q92466 427 aa8.09□□□□□ -1.11
CBX5-202ENST00000439541 HSD17B10Q99714 261 aaKnown RBP8.09□□□□□ -1.11
CBX5-202ENST00000439541 C7orf69Q9H7B7 122 aa8.09□□□□□ -1.11
CBX5-202ENST00000439541 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.09□□□□□ -1.11
CBX5-202ENST00000439541 A0A087WWC5 75 aa8.08□□□□□ -1.12
CBX5-202ENST00000439541 CENPVL3A0A0U1RRI6 287 aa8.08□□□□□ -1.12
CBX5-202ENST00000439541 CXorf65A6NEN9 183 aa8.08□□□□□ -1.12
CBX5-202ENST00000439541 S1PR2O95136 353 aa8.08□□□□□ -1.12
CBX5-202ENST00000439541 HSPB1P04792 205 aaKnown RBP8.08□□□□□ -1.12
CBX5-202ENST00000439541 AKR1C3P42330 323 aa8.08□□□□□ -1.12
CBX5-202ENST00000439541 ZNF137PP52743 207 aa8.08□□□□□ -1.12
CBX5-202ENST00000439541 PRRX1P54821 245 aa8.08□□□□□ -1.12
CBX5-202ENST00000439541 POLR2GP62487 172 aaKnown RBP eCLIP8.08□□□□□ -1.12
CBX5-202ENST00000439541 CATR1Q13166 79 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms