RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 BCL2L14Q9BZR8 327 aa1.49□□□□□ -2.17
VPS41-207ENST00000439468 NDEL1Q9GZM8 345 aa1.49□□□□□ -2.17
VPS41-207ENST00000439468 C1orf109Q9NX04 203 aa1.49□□□□□ -2.17
VPS41-207ENST00000439468 ZNF337Q9Y3M9 751 aa1.49□□□□□ -2.17
VPS41-207ENST00000439468 HSPE1-MOB4S4R3N1 261 aa1.49□□□□□ -2.17
VPS41-207ENST00000439468 GOLGA4Q13439 2230 aaKnown RBP1.49□□□□□ -2.17
VPS41-207ENST00000439468 ZFC3H1O60293 1989 aaKnown RBP1.48□□□□□ -2.17
VPS41-207ENST00000439468 PLXND1Q9Y4D7 1925 aa1.48□□□□□ -2.17
VPS41-207ENST00000439468 LOC102725191A0A1B0GVB3 256 aa1.48□□□□□ -2.17
VPS41-207ENST00000439468 A8MWP6 167 aa1.48□□□□□ -2.17
VPS41-207ENST00000439468 CTSEP14091 401 aa1.48□□□□□ -2.17
VPS41-207ENST00000439468 CBR1P16152 277 aa1.48□□□□□ -2.17
VPS41-207ENST00000439468 GZMHP20718 246 aa1.48□□□□□ -2.17
VPS41-207ENST00000439468 PPP1CCP36873 323 aaKnown RBP1.48□□□□□ -2.17
VPS41-207ENST00000439468 STC1P52823 247 aa1.48□□□□□ -2.17
VPS41-207ENST00000439468 CLDN12P56749 244 aa1.48□□□□□ -2.17
VPS41-207ENST00000439468 ACTBP60709 375 aa1.48□□□□□ -2.17
VPS41-207ENST00000439468 FKBP1AP62942 108 aaKnown RBP1.48□□□□□ -2.17
VPS41-207ENST00000439468 ACTG1P63261 375 aa1.48□□□□□ -2.17
VPS41-207ENST00000439468 FAM3AP98173 230 aa1.48□□□□□ -2.17
VPS41-207ENST00000439468 TIMM23BQ5SRD1 257 aa1.48□□□□□ -2.17
VPS41-207ENST00000439468 SPATA31B1PQ5VZV4 182 aa1.48□□□□□ -2.17
VPS41-207ENST00000439468 MTERF4Q7Z6M4 381 aaKnown RBP1.48□□□□□ -2.17
VPS41-207ENST00000439468 ZBTB8OSQ8IWT0 167 aa1.48□□□□□ -2.17
VPS41-207ENST00000439468 RIBC1Q8N443 379 aaPredicted RBP1.48□□□□□ -2.17
VPS41-207ENST00000439468 ZFAND2AQ8N6M9 145 aa1.48□□□□□ -2.17
VPS41-207ENST00000439468 OR10P1Q8NGE3 313 aa1.48□□□□□ -2.17
VPS41-207ENST00000439468 GALMQ96C23 342 aa1.48□□□□□ -2.17
VPS41-207ENST00000439468 GPR22Q99680 433 aa1.48□□□□□ -2.17
VPS41-207ENST00000439468 CFAP45Q9UL16 551 aa1.48□□□□□ -2.17
VPS41-207ENST00000439468 TRRAPQ9Y4A5 3859 aa1.47□□□□□ -2.17
VPS41-207ENST00000439468 ZNF638Q14966 1978 aaKnown RBP1.47□□□□□ -2.17
VPS41-207ENST00000439468 MAP1AP78559 2803 aaPredicted RBP1.47□□□□□ -2.17
VPS41-207ENST00000439468 RYR2Q92736 4967 aa1.47□□□□□ -2.17
VPS41-207ENST00000439468 F5H5K5 113 aa1.47□□□□□ -2.17
VPS41-207ENST00000439468 F5H5T6 163 aa1.47□□□□□ -2.17
VPS41-207ENST00000439468 PHYHO14832 338 aa1.47□□□□□ -2.17
VPS41-207ENST00000439468 SYNGR1O43759 233 aa1.47□□□□□ -2.17
VPS41-207ENST00000439468 UGT2B11O75310 529 aa1.47□□□□□ -2.17
VPS41-207ENST00000439468 ATP6V1G2O95670 118 aa1.47□□□□□ -2.17
VPS41-207ENST00000439468 SOD1P00441 154 aa1.47□□□□□ -2.17
VPS41-207ENST00000439468 FBP1P09467 338 aa1.47□□□□□ -2.17
VPS41-207ENST00000439468 FUSP35637 526 aaKnown RBP eCLIP1.47□□□□□ -2.17
VPS41-207ENST00000439468 PSMD8P48556 350 aa1.47□□□□□ -2.17
VPS41-207ENST00000439468 PSMB3P49720 205 aa1.47□□□□□ -2.17
VPS41-207ENST00000439468 GTF2BQ00403 316 aa1.47□□□□□ -2.17
VPS41-207ENST00000439468 C1DQ13901 141 aaKnown RBP1.47□□□□□ -2.17
VPS41-207ENST00000439468 C4orf26Q17RF5 130 aa1.47□□□□□ -2.17
VPS41-207ENST00000439468 MESTQ5EB52 335 aa1.47□□□□□ -2.17
VPS41-207ENST00000439468 FKBP1CQ5VVH2 108 aa1.47□□□□□ -2.17
VPS41-207ENST00000439468 SDIM1Q6ZPB5 146 aa1.47□□□□□ -2.17
VPS41-207ENST00000439468 ATP6V1G3Q96LB4 118 aa1.47□□□□□ -2.17
VPS41-207ENST00000439468 GTSF1LQ9H1H1 148 aa1.47□□□□□ -2.17
VPS41-207ENST00000439468 C16orf95Q9H693 158 aa1.47□□□□□ -2.17
VPS41-207ENST00000439468 CD300AQ9UGN4 299 aa1.47□□□□□ -2.17
VPS41-207ENST00000439468 VPREB3Q9UKI3 123 aa1.47□□□□□ -2.17
VPS41-207ENST00000439468 MMACHCQ9Y4U1 282 aa1.47□□□□□ -2.17
VPS41-207ENST00000439468 OBSL1O75147 1896 aa1.47□□□□□ -2.17
VPS41-207ENST00000439468 ZANQ9Y493 2812 aa1.46□□□□□ -2.18
VPS41-207ENST00000439468 TRPM6Q9BX84 2022 aa1.46□□□□□ -2.18
VPS41-207ENST00000439468 M0QYV0 167 aa1.46□□□□□ -2.18
VPS41-207ENST00000439468 TP53I11O14683 189 aa1.46□□□□□ -2.18
VPS41-207ENST00000439468 CYTH3O43739 400 aa1.46□□□□□ -2.18
VPS41-207ENST00000439468 OR13C7P0DN81 318 aa1.46□□□□□ -2.18
VPS41-207ENST00000439468 CASQ1P31415 396 aa1.46□□□□□ -2.18
VPS41-207ENST00000439468 SMAGPQ0VAQ4 97 aa1.46□□□□□ -2.18
VPS41-207ENST00000439468 HTR4Q13639 388 aa1.46□□□□□ -2.18
VPS41-207ENST00000439468 PDK2Q15119 407 aa1.46□□□□□ -2.18
VPS41-207ENST00000439468 MAPK14Q16539 360 aa1.46□□□□□ -2.18
VPS41-207ENST00000439468 FUNDC1Q8IVP5 155 aa1.46□□□□□ -2.18
VPS41-207ENST00000439468 OR8K1Q8NGG5 319 aa1.46□□□□□ -2.18
VPS41-207ENST00000439468 OR5AK3PQ8NH89 298 aa1.46□□□□□ -2.18
VPS41-207ENST00000439468 PPWD1Q96BP3 646 aaKnown RBP1.46□□□□□ -2.18
VPS41-207ENST00000439468 CAPZA3Q96KX2 299 aa1.46□□□□□ -2.18
VPS41-207ENST00000439468 STACQ99469 402 aa1.46□□□□□ -2.18
VPS41-207ENST00000439468 ZNF251Q9BRH9 671 aa1.46□□□□□ -2.18
VPS41-207ENST00000439468 TMEM208Q9BTX3 173 aa1.46□□□□□ -2.18
VPS41-207ENST00000439468 MED18Q9BUE0 208 aa1.46□□□□□ -2.18
VPS41-207ENST00000439468 UGT2B28Q9BY64 529 aa1.46□□□□□ -2.18
VPS41-207ENST00000439468 AICDAQ9GZX7 198 aa1.46□□□□□ -2.18
VPS41-207ENST00000439468 LRRC19Q9H756 370 aa1.46□□□□□ -2.18
VPS41-207ENST00000439468 DNAJC12Q9UKB3 198 aa1.46□□□□□ -2.18
VPS41-207ENST00000439468 MRPS16Q9Y3D3 137 aaKnown RBP1.46□□□□□ -2.18
VPS41-207ENST00000439468 MINOS1-NBL1R4GNA1 71 aa1.46□□□□□ -2.18
VPS41-207ENST00000439468 HERC2O95714 4834 aa1.46□□□□□ -2.18
VPS41-207ENST00000439468 C17orf51A8MQB3 221 aa1.45□□□□□ -2.18
VPS41-207ENST00000439468 F8VZ95 297 aa1.45□□□□□ -2.18
VPS41-207ENST00000439468 DEDDO75618 318 aa1.45□□□□□ -2.18
VPS41-207ENST00000439468 CRTAPO75718 401 aaPredicted RBP1.45□□□□□ -2.18
VPS41-207ENST00000439468 ZNF189O75820 626 aaPredicted RBP1.45□□□□□ -2.18
VPS41-207ENST00000439468 ARL6IP5O75915 188 aa1.45□□□□□ -2.18
VPS41-207ENST00000439468 PET100P0DJ07 73 aa1.45□□□□□ -2.18
VPS41-207ENST00000439468 CPMP14384 443 aa1.45□□□□□ -2.18
VPS41-207ENST00000439468 LINC00313P59037 77 aa1.45□□□□□ -2.18
VPS41-207ENST00000439468 UBE2G2P60604 165 aa1.45□□□□□ -2.18
VPS41-207ENST00000439468 SKP1P63208 163 aa1.45□□□□□ -2.18
VPS41-207ENST00000439468 FAM45BPQ6NSW5 357 aa1.45□□□□□ -2.18
VPS41-207ENST00000439468 ZNF322Q6U7Q0 402 aaPredicted RBP1.45□□□□□ -2.18
VPS41-207ENST00000439468 DNAAF3Q8N9W5 541 aa1.45□□□□□ -2.18
VPS41-207ENST00000439468 TNFAIP8L1Q8WVP5 186 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms