RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 QTRT1Q9BXR0 403 aaKnown RBP16.48■□□□□ 0.23
CHD3-204ENST00000439235 COMMD5Q9GZQ3 224 aa16.48■□□□□ 0.23
CHD3-204ENST00000439235 ZFP57Q9NU63 452 aa16.48■□□□□ 0.23
CHD3-204ENST00000439235 ZNF257Q9Y2Q1 563 aa16.48■□□□□ 0.23
CHD3-204ENST00000439235 OR51B2Q9Y5P1 312 aa16.48■□□□□ 0.23
CHD3-204ENST00000439235 ST8SIA3O43173 380 aa16.47■□□□□ 0.23
CHD3-204ENST00000439235 SCGB1D2O95969 90 aa16.47■□□□□ 0.23
CHD3-204ENST00000439235 FAM157CP0CG43 387 aa16.47■□□□□ 0.23
CHD3-204ENST00000439235 TNXAQ16473 311 aa16.47■□□□□ 0.23
CHD3-204ENST00000439235 OR52E5Q8NH55 327 aa16.47■□□□□ 0.23
CHD3-204ENST00000439235 TNFRSF19Q9NS68 423 aa16.47■□□□□ 0.23
CHD3-204ENST00000439235 ACANP16112 2415 aa16.47■□□□□ 0.23
CHD3-204ENST00000439235 WRBO00258 174 aa16.46■□□□□ 0.23
CHD3-204ENST00000439235 CRLF1O75462 422 aa16.46■□□□□ 0.23
CHD3-204ENST00000439235 CA2P00918 260 aa16.46■□□□□ 0.23
CHD3-204ENST00000439235 IFNA17P01571 189 aa16.46■□□□□ 0.23
CHD3-204ENST00000439235 HLA-DRB1P01911 266 aa16.46■□□□□ 0.23
CHD3-204ENST00000439235 PJVKQ0ZLH3 352 aa16.46■□□□□ 0.23
CHD3-204ENST00000439235 IL15RAQ13261 267 aa16.46■□□□□ 0.23
CHD3-204ENST00000439235 RANGRFQ9HD47 186 aaPredicted RBP16.46■□□□□ 0.23
CHD3-204ENST00000439235 HSPB7Q9UBY9 170 aa16.46■□□□□ 0.23
CHD3-204ENST00000439235 DNAJC9-AS1A6NH13 148 aa16.45■□□□□ 0.22
CHD3-204ENST00000439235 CHST1O43916 411 aa16.45■□□□□ 0.22
CHD3-204ENST00000439235 MED6O75586 246 aa16.45■□□□□ 0.22
CHD3-204ENST00000439235 NXPH3O95157 252 aa16.45■□□□□ 0.22
CHD3-204ENST00000439235 PET100P0DJ07 73 aa16.45■□□□□ 0.22
CHD3-204ENST00000439235 S100A10P60903 97 aa16.45■□□□□ 0.22
CHD3-204ENST00000439235 SPCS3P61009 180 aa16.45■□□□□ 0.22
CHD3-204ENST00000439235 HSPE1P61604 102 aaKnown RBP16.45■□□□□ 0.22
CHD3-204ENST00000439235 GNB1P62873 340 aa16.45■□□□□ 0.22
CHD3-204ENST00000439235 TNFRSF9Q07011 255 aa16.45■□□□□ 0.22
CHD3-204ENST00000439235 FGL1Q08830 312 aa16.45■□□□□ 0.22
CHD3-204ENST00000439235 MRGPRG-AS1Q2M3A8 158 aa16.45■□□□□ 0.22
CHD3-204ENST00000439235 CXorf66Q5JRM2 361 aaPredicted RBP16.45■□□□□ 0.22
CHD3-204ENST00000439235 OR1L8Q8NGR8 309 aa16.45■□□□□ 0.22
CHD3-204ENST00000439235 JMJD8Q96S16 334 aa16.45■□□□□ 0.22
CHD3-204ENST00000439235 MTORP42345 2549 aa16.44■□□□□ 0.22
CHD3-204ENST00000439235 PFDN1O60925 122 aa16.44■□□□□ 0.22
CHD3-204ENST00000439235 MBPP02686 304 aaPredicted RBP16.44■□□□□ 0.22
CHD3-204ENST00000439235 RPL27AP46776 148 aaKnown RBP16.44■□□□□ 0.22
CHD3-204ENST00000439235 COMPP49747 757 aaPredicted RBP16.44■□□□□ 0.22
CHD3-204ENST00000439235 ID3Q02535 119 aa16.44■□□□□ 0.22
CHD3-204ENST00000439235 RAB32Q13637 225 aa16.44■□□□□ 0.22
CHD3-204ENST00000439235 PDLIM3Q53GG5 364 aaPredicted RBP16.44■□□□□ 0.22
CHD3-204ENST00000439235 ZNF562Q6V9R5 426 aa16.44■□□□□ 0.22
CHD3-204ENST00000439235 PPP1R1CQ8WVI7 109 aa16.44■□□□□ 0.22
CHD3-204ENST00000439235 ST6GAL2Q96JF0 529 aa16.44■□□□□ 0.22
CHD3-204ENST00000439235 HIVEP2P31629 2446 aa16.43■□□□□ 0.22
CHD3-204ENST00000439235 TEX50A0A1B0GTY4 177 aa16.43■□□□□ 0.22
CHD3-204ENST00000439235 CLDN34H7C241 214 aa16.43■□□□□ 0.22
CHD3-204ENST00000439235 FCN1O00602 326 aa16.43■□□□□ 0.22
CHD3-204ENST00000439235 CNIH1O95406 144 aa16.43■□□□□ 0.22
CHD3-204ENST00000439235 PSMB6P28072 239 aa16.43■□□□□ 0.22
CHD3-204ENST00000439235 LRRC37A5PQ49AS3 106 aa16.43■□□□□ 0.22
CHD3-204ENST00000439235 TCTE3Q8IZS6 198 aa16.43■□□□□ 0.22
CHD3-204ENST00000439235 OR2T35Q8NGX2 323 aa16.43■□□□□ 0.22
CHD3-204ENST00000439235 WDR89Q96FK6 387 aaPredicted RBP16.43■□□□□ 0.22
CHD3-204ENST00000439235 LSM5Q9Y4Y9 91 aaKnown RBP16.43■□□□□ 0.22
CHD3-204ENST00000439235 CEBPZOSA8MTT3 80 aa16.42■□□□□ 0.22
CHD3-204ENST00000439235 K7EPK0 472 aa16.42■□□□□ 0.22
CHD3-204ENST00000439235 SYNGR2O43760 224 aa16.42■□□□□ 0.22
CHD3-204ENST00000439235 GPR137BO60478 399 aa16.42■□□□□ 0.22
CHD3-204ENST00000439235 RLN2P04090 185 aa16.42■□□□□ 0.22
CHD3-204ENST00000439235 MYOD1P15172 320 aa16.42■□□□□ 0.22
CHD3-204ENST00000439235 HOXA1P49639 335 aaPredicted RBP16.42■□□□□ 0.22
CHD3-204ENST00000439235 HILS1P60008 231 aa16.42■□□□□ 0.22
CHD3-204ENST00000439235 POLR2GP62487 172 aaKnown RBP eCLIP16.42■□□□□ 0.22
CHD3-204ENST00000439235 CX3CL1P78423 397 aa16.42■□□□□ 0.22
CHD3-204ENST00000439235 PRCDQ00LT1 54 aa16.42■□□□□ 0.22
CHD3-204ENST00000439235 FXYD3Q14802 87 aa16.42■□□□□ 0.22
CHD3-204ENST00000439235 C10orf55Q5SWW7 151 aa16.42■□□□□ 0.22
CHD3-204ENST00000439235 MRPL41Q8IXM3 137 aaKnown RBP16.42■□□□□ 0.22
CHD3-204ENST00000439235 SRSF12Q8WXF0 261 aaKnown RBP16.42■□□□□ 0.22
CHD3-204ENST00000439235 ARPC1AQ92747 370 aa16.42■□□□□ 0.22
CHD3-204ENST00000439235 NEURL2Q9BR09 285 aa16.42■□□□□ 0.22
CHD3-204ENST00000439235 HINT2Q9BX68 163 aa16.42■□□□□ 0.22
CHD3-204ENST00000439235 NPFFR1Q9GZQ6 430 aa16.42■□□□□ 0.22
CHD3-204ENST00000439235 RBKSQ9H477 322 aa16.42■□□□□ 0.22
CHD3-204ENST00000439235 PLEKHA3Q9HB20 300 aa16.42■□□□□ 0.22
CHD3-204ENST00000439235 ENY2Q9NPA8 101 aa16.42■□□□□ 0.22
CHD3-204ENST00000439235 NAV3Q8IVL0 2385 aa16.41■□□□□ 0.22
CHD3-204ENST00000439235 IGHV7-81A0A0B4J1V7 117 aa16.41■□□□□ 0.22
CHD3-204ENST00000439235 A0A1W2PN81 502 aa16.41■□□□□ 0.22
CHD3-204ENST00000439235 MPC2O95563 127 aa16.41■□□□□ 0.22
CHD3-204ENST00000439235 LY86O95711 162 aa16.41■□□□□ 0.22
CHD3-204ENST00000439235 OPN1MWP04001 364 aa16.41■□□□□ 0.22
CHD3-204ENST00000439235 AMY1AP04745 511 aa16.41■□□□□ 0.22
CHD3-204ENST00000439235 OPN1MW2P0DN77 364 aa16.41■□□□□ 0.22
CHD3-204ENST00000439235 OPN1MW3P0DN78 364 aa16.41■□□□□ 0.22
CHD3-204ENST00000439235 PVALBP20472 110 aaPredicted RBP16.41■□□□□ 0.22
CHD3-204ENST00000439235 CHRNA7P36544 502 aa16.41■□□□□ 0.22
CHD3-204ENST00000439235 DTD1Q8TEA8 209 aa16.41■□□□□ 0.22
CHD3-204ENST00000439235 ABHD5Q8WTS1 349 aa16.41■□□□□ 0.22
CHD3-204ENST00000439235 DUX5Q96PT3 197 aa16.41■□□□□ 0.22
CHD3-204ENST00000439235 CIB3Q96Q77 187 aaPredicted RBP16.41■□□□□ 0.22
CHD3-204ENST00000439235 MAGT1Q9H0U3 335 aa16.41■□□□□ 0.22
CHD3-204ENST00000439235 NDUFA4L2Q9NRX3 87 aa16.41■□□□□ 0.22
CHD3-204ENST00000439235 RCL1Q9Y2P8 373 aaKnown RBP16.41■□□□□ 0.22
CHD3-204ENST00000439235 KCNAB3O43448 404 aa16.4■□□□□ 0.22
CHD3-204ENST00000439235 SSSCA1O60232 199 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms