RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 CD7P09564 240 aa5.86□□□□□ -1.47
VPS50-204ENST00000438395 GALP22466 123 aa5.86□□□□□ -1.47
VPS50-204ENST00000438395 CATR1Q13166 79 aa5.86□□□□□ -1.47
VPS50-204ENST00000438395 DEFB114Q30KQ6 69 aa5.86□□□□□ -1.47
VPS50-204ENST00000438395 ZNF57Q68EA5 555 aaPredicted RBP5.86□□□□□ -1.47
VPS50-204ENST00000438395 CNIH2Q6PI25 160 aa5.86□□□□□ -1.47
VPS50-204ENST00000438395 CLEC19AQ6UXS0 136 aa5.86□□□□□ -1.47
VPS50-204ENST00000438395 ZNF66Q6ZN08 573 aa5.86□□□□□ -1.47
VPS50-204ENST00000438395 RBPMS2Q6ZRY4 209 aaKnown RBP5.86□□□□□ -1.47
VPS50-204ENST00000438395 TMEM167AQ8TBQ9 72 aa5.86□□□□□ -1.47
VPS50-204ENST00000438395 SECTM1Q8WVN6 248 aa5.86□□□□□ -1.47
VPS50-204ENST00000438395 CXorf58Q96LI9 332 aa5.86□□□□□ -1.47
VPS50-204ENST00000438395 GGTLC1Q9BX51 225 aa5.86□□□□□ -1.47
VPS50-204ENST00000438395 COMMD5Q9GZQ3 224 aa5.86□□□□□ -1.47
VPS50-204ENST00000438395 SLC2A9Q9NRM0 540 aa5.86□□□□□ -1.47
VPS50-204ENST00000438395 DAPK2Q9UIK4 370 aa5.86□□□□□ -1.47
VPS50-204ENST00000438395 ANXA10Q9UJ72 324 aa5.86□□□□□ -1.47
VPS50-204ENST00000438395 DNAH7Q8WXX0 4024 aa5.85□□□□□ -1.47
VPS50-204ENST00000438395 IGKV1D-8A0A087WSZ0 117 aa5.85□□□□□ -1.47
VPS50-204ENST00000438395 TRBV7-1A0A0A6YYK4 115 aa5.85□□□□□ -1.47
VPS50-204ENST00000438395 CXorf65A6NEN9 183 aa5.85□□□□□ -1.47
VPS50-204ENST00000438395 TEX22C9J3V5 150 aa5.85□□□□□ -1.47
VPS50-204ENST00000438395 SCAF4O95104 1147 aaKnown RBP5.85□□□□□ -1.47
VPS50-204ENST00000438395 IGHV3-23P01764 117 aa5.85□□□□□ -1.47
VPS50-204ENST00000438395 AREGP15514 252 aa5.85□□□□□ -1.47
VPS50-204ENST00000438395 HLA-GP17693 338 aa5.85□□□□□ -1.47
VPS50-204ENST00000438395 CBLN1P23435 193 aa5.85□□□□□ -1.47
VPS50-204ENST00000438395 PSMB6P28072 239 aa5.85□□□□□ -1.47
VPS50-204ENST00000438395 ERVK-16P61578 105 aa5.85□□□□□ -1.47
VPS50-204ENST00000438395 RPL30P62888 115 aaKnown RBP5.85□□□□□ -1.47
VPS50-204ENST00000438395 MRGPRG-AS1Q2M3A8 158 aa5.85□□□□□ -1.47
VPS50-204ENST00000438395 BTNL8Q6UX41 500 aa5.85□□□□□ -1.47
VPS50-204ENST00000438395 TPRA1Q86W33 373 aa5.85□□□□□ -1.47
VPS50-204ENST00000438395 SLC38A6Q8IZM9 456 aa5.85□□□□□ -1.47
VPS50-204ENST00000438395 TMEM61Q8N0U2 210 aa5.85□□□□□ -1.47
VPS50-204ENST00000438395 OR13F1Q8NGS4 319 aa5.85□□□□□ -1.47
VPS50-204ENST00000438395 OR4A5Q8NH83 315 aa5.85□□□□□ -1.47
VPS50-204ENST00000438395 LGALS14Q8TCE9 139 aa5.85□□□□□ -1.47
VPS50-204ENST00000438395 NRG4Q8WWG1 115 aa5.85□□□□□ -1.47
VPS50-204ENST00000438395 CACNG8Q8WXS5 425 aa5.85□□□□□ -1.47
VPS50-204ENST00000438395 FCGR1BQ92637 280 aa5.85□□□□□ -1.47
VPS50-204ENST00000438395 BORCS5Q969J3 196 aa5.85□□□□□ -1.47
VPS50-204ENST00000438395 MARC2Q969Z3 335 aa5.85□□□□□ -1.47
VPS50-204ENST00000438395 WFDC10AQ9H1F0 79 aa5.85□□□□□ -1.47
VPS50-204ENST00000438395 Q9H521 79 aa5.85□□□□□ -1.47
VPS50-204ENST00000438395 ZC4H2Q9NQZ6 224 aa5.85□□□□□ -1.47
VPS50-204ENST00000438395 RHBDL2Q9NX52 303 aa5.85□□□□□ -1.47
VPS50-204ENST00000438395 THYN1Q9P016 225 aa5.85□□□□□ -1.47
VPS50-204ENST00000438395 ELF5Q9UKW6 265 aaPredicted RBP5.85□□□□□ -1.47
VPS50-204ENST00000438395 SSR3Q9UNL2 185 aa5.85□□□□□ -1.47
VPS50-204ENST00000438395 RRP15Q9Y3B9 282 aaKnown RBP5.85□□□□□ -1.47
VPS50-204ENST00000438395 UFC1Q9Y3C8 167 aa5.85□□□□□ -1.47
VPS50-204ENST00000438395 S4R3C0 116 aa5.85□□□□□ -1.47
VPS50-204ENST00000438395 IGKV1D-13A0A0B4J2D9 117 aa5.84□□□□□ -1.47
VPS50-204ENST00000438395 RBMY1BA6NDE4 496 aaKnown RBP5.84□□□□□ -1.47
VPS50-204ENST00000438395 RBMY1EA6NEQ0 496 aaKnown RBP5.84□□□□□ -1.47
VPS50-204ENST00000438395 ZNF785A8K8V0 405 aa5.84□□□□□ -1.47
VPS50-204ENST00000438395 A8MWP6 167 aa5.84□□□□□ -1.47
VPS50-204ENST00000438395 TNFSF12O43508 249 aa5.84□□□□□ -1.47
VPS50-204ENST00000438395 MRPS14O60783 128 aaKnown RBP5.84□□□□□ -1.47
VPS50-204ENST00000438395 NDUFB8O95169 186 aa5.84□□□□□ -1.47
VPS50-204ENST00000438395 REG1AP05451 166 aa5.84□□□□□ -1.47
VPS50-204ENST00000438395 IL6RP08887 468 aaPredicted RBP5.84□□□□□ -1.47
VPS50-204ENST00000438395 RBMY1DP0C7P1 496 aaKnown RBP5.84□□□□□ -1.47
VPS50-204ENST00000438395 ZNF735P0CB33 412 aa5.84□□□□□ -1.47
VPS50-204ENST00000438395 IGKV1-13P0DP09 117 aa5.84□□□□□ -1.47
VPS50-204ENST00000438395 MYOD1P15172 320 aa5.84□□□□□ -1.47
VPS50-204ENST00000438395 FCGR2CP31995 323 aa5.84□□□□□ -1.47
VPS50-204ENST00000438395 GPR183P32249 361 aa5.84□□□□□ -1.47
VPS50-204ENST00000438395 MECP2P51608 486 aaKnown RBP5.84□□□□□ -1.47
VPS50-204ENST00000438395 APOC4P55056 127 aa5.84□□□□□ -1.47
VPS50-204ENST00000438395 FXYD4P59646 89 aa5.84□□□□□ -1.47
VPS50-204ENST00000438395 GABARAPL2P60520 117 aa5.84□□□□□ -1.47
VPS50-204ENST00000438395 HERV-K104P61576 105 aa5.84□□□□□ -1.47
VPS50-204ENST00000438395 TIMM50Q3ZCQ8 353 aa5.84□□□□□ -1.47
VPS50-204ENST00000438395 AADACL3Q5VUY0 350 aa5.84□□□□□ -1.47
VPS50-204ENST00000438395 SFXN4Q6P4A7 337 aa5.84□□□□□ -1.47
VPS50-204ENST00000438395 PLET1Q6UQ28 207 aa5.84□□□□□ -1.47
VPS50-204ENST00000438395 C19orf35Q6ZS72 473 aa5.84□□□□□ -1.47
VPS50-204ENST00000438395 GPHB5Q86YW7 130 aa5.84□□□□□ -1.47
VPS50-204ENST00000438395 SPAG16Q8N0X2 631 aa5.84□□□□□ -1.47
VPS50-204ENST00000438395 PUSL1Q8N0Z8 303 aaKnown RBP5.84□□□□□ -1.47
VPS50-204ENST00000438395 UXS1Q8NBZ7 420 aa5.84□□□□□ -1.47
VPS50-204ENST00000438395 BEST4Q8NFU0 473 aa5.84□□□□□ -1.47
VPS50-204ENST00000438395 DMBX1Q8NFW5 382 aa5.84□□□□□ -1.47
VPS50-204ENST00000438395 OR1L6Q8NGR2 347 aa5.84□□□□□ -1.47
VPS50-204ENST00000438395 CD300LFQ8TDQ1 290 aa5.84□□□□□ -1.47
VPS50-204ENST00000438395 CCDC140Q96MF4 163 aa5.84□□□□□ -1.47
VPS50-204ENST00000438395 KRTAP4-2Q9BYR5 136 aa5.84□□□□□ -1.47
VPS50-204ENST00000438395 SLC5A7Q9GZV3 580 aa5.84□□□□□ -1.47
VPS50-204ENST00000438395 BET1LQ9NYM9 111 aa5.84□□□□□ -1.47
VPS50-204ENST00000438395 ETV7Q9Y603 341 aa5.84□□□□□ -1.47
VPS50-204ENST00000438395 SACSQ9NZJ4 4579 aa5.83□□□□□ -1.48
VPS50-204ENST00000438395 TRAV18A0A075B6X5 111 aa5.83□□□□□ -1.48
VPS50-204ENST00000438395 LOC102724200A0A096LPH7 203 aaPredicted RBP5.83□□□□□ -1.48
VPS50-204ENST00000438395 TRAV25A0A0B4J276 109 aa5.83□□□□□ -1.48
VPS50-204ENST00000438395 TMEM213A2RRL7 107 aa5.83□□□□□ -1.48
VPS50-204ENST00000438395 SULT1C2O00338 296 aa5.83□□□□□ -1.48
VPS50-204ENST00000438395 RBFOX2O43251 390 aaKnown RBP eCLIP5.83□□□□□ -1.48
VPS50-204ENST00000438395 PPYP01298 95 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms