RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 FAM90A2PQ658T7 463 aa5.61□□□□□ -1.51
CSDE1-205ENST00000438362 TMEM14EPQ6UXP3 125 aa5.61□□□□□ -1.51
CSDE1-205ENST00000438362 GFRALQ6UXV0 394 aa5.61□□□□□ -1.51
CSDE1-205ENST00000438362 Q6ZRM9 215 aa5.61□□□□□ -1.51
CSDE1-205ENST00000438362 OR2T6Q8NHC8 308 aa5.61□□□□□ -1.51
CSDE1-205ENST00000438362 GATAD1Q8WUU5 269 aa5.61□□□□□ -1.51
CSDE1-205ENST00000438362 VPS25Q9BRG1 176 aa5.61□□□□□ -1.51
CSDE1-205ENST00000438362 IL36BQ9NZH7 164 aa5.61□□□□□ -1.51
CSDE1-205ENST00000438362 SLC25A10Q9UBX3 287 aaPredicted RBP5.61□□□□□ -1.51
CSDE1-205ENST00000438362 GOLT1BQ9Y3E0 138 aa5.61□□□□□ -1.51
CSDE1-205ENST00000438362 DOCK11Q5JSL3 2073 aa5.61□□□□□ -1.51
CSDE1-205ENST00000438362 M0R296 226 aa5.61□□□□□ -1.51
CSDE1-205ENST00000438362 AMBPP02760 352 aa5.61□□□□□ -1.51
CSDE1-205ENST00000438362 C1QTNF9P0C862 333 aa5.61□□□□□ -1.51
CSDE1-205ENST00000438362 CD99P14209 185 aa5.61□□□□□ -1.51
CSDE1-205ENST00000438362 IGHV1-2P23083 117 aa5.61□□□□□ -1.51
CSDE1-205ENST00000438362 SRIP30626 198 aa5.61□□□□□ -1.51
CSDE1-205ENST00000438362 Q56UQ5 140 aa5.61□□□□□ -1.51
CSDE1-205ENST00000438362 C19orf24Q9BVV8 132 aa5.61□□□□□ -1.51
CSDE1-205ENST00000438362 DNAJC4Q9NNZ3 241 aa5.61□□□□□ -1.51
CSDE1-205ENST00000438362 IDI2-AS1Q9NZ38 188 aa5.61□□□□□ -1.51
CSDE1-205ENST00000438362 NCOA6Q14686 2063 aaPredicted RBP5.61□□□□□ -1.51
CSDE1-205ENST00000438362 IGKV1-6A0A0C4DH72 117 aa5.61□□□□□ -1.51
CSDE1-205ENST00000438362 FOXI3A8MTJ6 420 aaPredicted RBP5.61□□□□□ -1.51
CSDE1-205ENST00000438362 RRHO14718 337 aa5.61□□□□□ -1.51
CSDE1-205ENST00000438362 CSN3P07498 182 aa5.61□□□□□ -1.51
CSDE1-205ENST00000438362 COX7A1P24310 79 aa5.61□□□□□ -1.51
CSDE1-205ENST00000438362 GNB2P62879 340 aa5.61□□□□□ -1.51
CSDE1-205ENST00000438362 KIAA1549LQ6ZVL6 1849 aa5.61□□□□□ -1.51
CSDE1-205ENST00000438362 DOLPP1Q86YN1 238 aa5.61□□□□□ -1.51
CSDE1-205ENST00000438362 HS3ST6Q96QI5 342 aa5.61□□□□□ -1.51
CSDE1-205ENST00000438362 IMMP2LQ96T52 175 aa5.61□□□□□ -1.51
CSDE1-205ENST00000438362 HEATR1Q9H583 2144 aaKnown RBP5.61□□□□□ -1.51
CSDE1-205ENST00000438362 A8MWL6 223 aa5.6□□□□□ -1.51
CSDE1-205ENST00000438362 DLL1O00548 723 aa5.6□□□□□ -1.51
CSDE1-205ENST00000438362 CGAP01215 116 aa5.6□□□□□ -1.51
CSDE1-205ENST00000438362 IGHV2-5P01817 119 aa5.6□□□□□ -1.51
CSDE1-205ENST00000438362 ATP5IP56385 69 aaPredicted RBP5.6□□□□□ -1.51
CSDE1-205ENST00000438362 ACSF3Q4G176 576 aaPredicted RBP5.6□□□□□ -1.51
CSDE1-205ENST00000438362 COLCA1Q6ZS62 124 aa5.6□□□□□ -1.51
CSDE1-205ENST00000438362 LYPD6BQ8NI32 183 aa5.6□□□□□ -1.51
CSDE1-205ENST00000438362 ZNF430Q9H8G1 570 aaPredicted RBP5.6□□□□□ -1.51
CSDE1-205ENST00000438362 UQCR10Q9UDW1 63 aa5.6□□□□□ -1.51
CSDE1-205ENST00000438362 AMMECR1Q9Y4X0 333 aaPredicted RBP5.6□□□□□ -1.51
CSDE1-205ENST00000438362 AMY1AP04745 511 aa5.6□□□□□ -1.51
CSDE1-205ENST00000438362 ZNF883P0CG24 379 aa5.6□□□□□ -1.51
CSDE1-205ENST00000438362 ARL16Q0P5N6 197 aa5.6□□□□□ -1.51
CSDE1-205ENST00000438362 Q0VFX4 171 aa5.6□□□□□ -1.51
CSDE1-205ENST00000438362 SPATA45Q537H7 98 aa5.6□□□□□ -1.51
CSDE1-205ENST00000438362 ARSJQ5FYB0 599 aaPredicted RBP5.6□□□□□ -1.51
CSDE1-205ENST00000438362 C20orf204Q6ZNR8 217 aa5.6□□□□□ -1.51
CSDE1-205ENST00000438362 ZNF714Q96N38 554 aa5.6□□□□□ -1.51
CSDE1-205ENST00000438362 GSX1Q9H4S2 264 aaPredicted RBP5.6□□□□□ -1.51
CSDE1-205ENST00000438362 YTHDF2Q9Y5A9 579 aaKnown RBP5.6□□□□□ -1.51
CSDE1-205ENST00000438362 PPIAL4EA0A075B759 164 aa5.6□□□□□ -1.51
CSDE1-205ENST00000438362 C9orf172C9J069 976 aa5.6□□□□□ -1.51
CSDE1-205ENST00000438362 PPIAL4DF5H284 164 aa5.6□□□□□ -1.51
CSDE1-205ENST00000438362 PSPNO60542 156 aa5.6□□□□□ -1.51
CSDE1-205ENST00000438362 LILRA1O75019 489 aa5.6□□□□□ -1.51
CSDE1-205ENST00000438362 HYPMO75409 117 aa5.6□□□□□ -1.51
CSDE1-205ENST00000438362 PLAUP00749 431 aa5.6□□□□□ -1.51
CSDE1-205ENST00000438362 PPIAL4FP0DN26 164 aa5.6□□□□□ -1.51
CSDE1-205ENST00000438362 TMEM11P17152 192 aa5.6□□□□□ -1.51
CSDE1-205ENST00000438362 IGFBP2P18065 325 aa5.6□□□□□ -1.51
CSDE1-205ENST00000438362 RND2P52198 227 aa5.6□□□□□ -1.51
CSDE1-205ENST00000438362 PMCHL1Q16048 86 aa5.6□□□□□ -1.51
CSDE1-205ENST00000438362 VWA1Q6PCB0 445 aa5.6□□□□□ -1.51
CSDE1-205ENST00000438362 SSC4DQ8WTU2 575 aa5.6□□□□□ -1.51
CSDE1-205ENST00000438362 ZCCHC14Q8WYQ9 949 aaKnown RBP5.6□□□□□ -1.51
CSDE1-205ENST00000438362 ASCL3Q9NQ33 180 aa5.6□□□□□ -1.51
CSDE1-205ENST00000438362 PPIAL4AQ9Y536 164 aa5.6□□□□□ -1.51
CSDE1-205ENST00000438362 POLEQ07864 2286 aa5.59□□□□□ -1.51
CSDE1-205ENST00000438362 TRAV9-1A0A075B6T8 112 aa5.59□□□□□ -1.51
CSDE1-205ENST00000438362 SPAARA0A1B0GVQ0 90 aa5.59□□□□□ -1.51
CSDE1-205ENST00000438362 LNP1A1A4G5 178 aa5.59□□□□□ -1.51
CSDE1-205ENST00000438362 PGPEP1LA6NFU8 196 aa5.59□□□□□ -1.51
CSDE1-205ENST00000438362 RPL30P62888 115 aaKnown RBP5.59□□□□□ -1.51
CSDE1-205ENST00000438362 NHLH1Q02575 133 aa5.59□□□□□ -1.51
CSDE1-205ENST00000438362 GCSAMLQ5JQS6 135 aa5.59□□□□□ -1.51
CSDE1-205ENST00000438362 OR4A47Q6IF82 309 aa5.59□□□□□ -1.51
CSDE1-205ENST00000438362 WDR82Q6UXN9 313 aa5.59□□□□□ -1.51
CSDE1-205ENST00000438362 LURAP1LQ8IV03 231 aa5.59□□□□□ -1.51
CSDE1-205ENST00000438362 NHLRC2Q8NBF2 726 aa5.59□□□□□ -1.51
CSDE1-205ENST00000438362 C1orf162Q8NEQ5 155 aaPredicted RBP5.59□□□□□ -1.51
CSDE1-205ENST00000438362 LOXL4Q96JB6 756 aa5.59□□□□□ -1.51
CSDE1-205ENST00000438362 PROK2Q9HC23 129 aa5.59□□□□□ -1.51
CSDE1-205ENST00000438362 RNF24Q9Y225 148 aa5.59□□□□□ -1.51
CSDE1-205ENST00000438362 INSIG2Q9Y5U4 225 aa5.59□□□□□ -1.51
CSDE1-205ENST00000438362 KIF26AQ9ULI4 1882 aaPredicted RBP5.59□□□□□ -1.51
CSDE1-205ENST00000438362 SPTBN1Q01082 2364 aaKnown RBP5.59□□□□□ -1.51
CSDE1-205ENST00000438362 TRGV8A0A0C4DH27 118 aa5.59□□□□□ -1.51
CSDE1-205ENST00000438362 PGPA6NDG6 321 aa5.59□□□□□ -1.51
CSDE1-205ENST00000438362 NPIPB11E5RHQ5 1161 aa5.59□□□□□ -1.51
CSDE1-205ENST00000438362 C16orf97H3BN30 126 aa5.59□□□□□ -1.51
CSDE1-205ENST00000438362 APELAP0DMC3 54 aa5.59□□□□□ -1.51
CSDE1-205ENST00000438362 DUTP33316 252 aaKnown RBP5.59□□□□□ -1.51
CSDE1-205ENST00000438362 GLRXP35754 106 aa5.59□□□□□ -1.51
CSDE1-205ENST00000438362 RPL27AP46776 148 aaKnown RBP5.59□□□□□ -1.51
CSDE1-205ENST00000438362 ZNF137PP52743 207 aa5.59□□□□□ -1.51
CSDE1-205ENST00000438362 PAX9P55771 341 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms