RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 R4GN34 69 aa1.31□□□□□ -2.2
HMGB1P31-201ENST00000437242 V9GYY5 206 aaPredicted RBP1.31□□□□□ -2.2
HMGB1P31-201ENST00000437242 HSPG2P98160 4391 aa1.31□□□□□ -2.2
HMGB1P31-201ENST00000437242 DNAH2Q9P225 4427 aa1.31□□□□□ -2.2
HMGB1P31-201ENST00000437242 DNAH17Q9UFH2 4485 aa1.31□□□□□ -2.2
HMGB1P31-201ENST00000437242 hCG_1818297A0A087WSY0 165 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 IGHV3-15A0A0B4J1V0 119 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 LOC389332A0A1B0GUA5 103 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 TVP23AA6NH52 213 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 ATP6V1G2-DDX39BF2Z307 99 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 RGS5O15539 181 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 SPOPO43791 374 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 COX7A2P2O60397 106 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 CST8O60676 142 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 UGT2B11O75310 529 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 PSIP1O75475 530 aaKnown RBP1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 ZNF189O75820 626 aaPredicted RBP1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 LYZL6O75951 148 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 PROSCO94903 275 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 IFNA16P05015 189 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 CECR9P0C854 216 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 ZNF35P13682 527 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 HRES1P13985 223 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 MAGEA6P43360 314 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 ZNF83P51522 516 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 REEP5Q00765 189 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 ENDOGQ14249 297 aaKnown RBP1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 SPA17Q15506 151 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 SSX1Q16384 188 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 Q499Y3 187 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 SPRNQ5BIV9 151 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 TTMPQ5BVD1 217 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 AMMECR1LQ6DCA0 310 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 FAHD1Q6P587 224 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 PAGE2Q7Z2X7 111 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 TMEM144Q7Z5S9 345 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 COMTD1Q86VU5 262 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 ST13P4Q8IZP2 240 aaPredicted RBP1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 GAPTQ8N292 157 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 C3orf22Q8N5N4 141 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 CLDND2Q8NHS1 167 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 CACNG8Q8WXS5 425 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 CDKL2Q92772 493 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 MS4A6EQ96DS6 147 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 ADTRPQ96IZ2 230 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 VAT1Q99536 393 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 SRRQ9GZT4 340 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 NXF2Q9GZY0 626 aaKnown RBP1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 ABCG5Q9H222 651 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 TRABDQ9H4I3 376 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 DUSP21Q9H596 190 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 RNF122Q9H9V4 155 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 PRTFDC1Q9NRG1 225 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 TMEM38BQ9NVV0 291 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 BOKQ9UMX3 212 aaPredicted RBP1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 ZNF337Q9Y3M9 751 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 TRAPPC1Q9Y5R8 145 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 KMT2AQ03164 3969 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 DNAH11Q96DT5 4516 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 PKD1P98161 4303 aa1.3□□□□□ -2.2
HMGB1P31-201ENST00000437242 MYCBP2O75592 4640 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 IGHV3-43A0A0B4J1X8 118 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 A0A0J9YW62 118 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 LCE6AA0A183 80 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 LEUTXA8MZ59 168 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 H3BQ85 93 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 C15orf65H3BRN8 121 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 K7EN84 100 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 NDUFS8O00217 210 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 PGRMC1O00264 195 aaKnown RBP1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 BANF1O75531 89 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 KLHL2O95198 593 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 RLN2P04090 185 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 MLNP12872 115 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 SLC25A16P16260 332 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 LGALS3P17931 250 aaKnown RBP1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 TAC1P20366 129 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 CCNOP22674 350 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 AGTR1P30556 359 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 RPL22P35268 128 aaKnown RBP1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 MAGEA3P43357 314 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 TTPAP49638 278 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 EFNA4P52798 201 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 RAB38P57729 211 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 CAV1Q03135 178 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 PRB3Q04118 309 aaPredicted RBP1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 STX5Q13190 355 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 CASP8Q14790 479 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 SLC9A3R2Q15599 337 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 ACTL10Q5JWF8 245 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 UBE2NLQ5JXB2 153 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 LDLRAD2Q5SZI1 272 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 ZNF470Q6ECI4 717 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 PTRHD1Q6GMV3 140 aaKnown RBP1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 AGTRAPQ6RW13 159 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 C4orf22Q6V702 233 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 Q6ZQT7 251 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 GALNT10Q86SR1 603 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 IFT20Q8IY31 132 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 AMN1Q8IY45 258 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms