RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 OR52E4Q8NGH9 312 aa3.21□□□□□ -1.9
USP54-206ENST00000433394 OR11L1Q8NGX0 322 aa3.21□□□□□ -1.9
USP54-206ENST00000433394 OR2V1Q8NHB1 315 aa3.21□□□□□ -1.9
USP54-206ENST00000433394 STOML3Q8TAV4 291 aa3.21□□□□□ -1.9
USP54-206ENST00000433394 NIPSNAP1Q9BPW8 284 aa3.21□□□□□ -1.9
USP54-206ENST00000433394 TM2D3Q9BRN9 247 aa3.21□□□□□ -1.9
USP54-206ENST00000433394 TMEM208Q9BTX3 173 aa3.21□□□□□ -1.9
USP54-206ENST00000433394 KIFC1Q9BW19 673 aa3.21□□□□□ -1.9
USP54-206ENST00000433394 SLC19A3Q9BZV2 496 aa3.21□□□□□ -1.9
USP54-206ENST00000433394 CHST5Q9GZS9 411 aa3.21□□□□□ -1.9
USP54-206ENST00000433394 ALX4Q9H161 411 aaPredicted RBP3.21□□□□□ -1.9
USP54-206ENST00000433394 GLS2Q9UI32 602 aa3.21□□□□□ -1.9
USP54-206ENST00000433394 ZNF337Q9Y3M9 751 aa3.21□□□□□ -1.9
USP54-206ENST00000433394 ANK1P16157 1881 aa3.21□□□□□ -1.9
USP54-206ENST00000433394 CEP290O15078 2479 aa3.21□□□□□ -1.9
USP54-206ENST00000433394 IGKV1OR2-108A0A075B7D4 117 aa3.2□□□□□ -1.9
USP54-206ENST00000433394 C4orf51C9J302 202 aa3.2□□□□□ -1.9
USP54-206ENST00000433394 FTCDNL1E5RQL4 147 aa3.2□□□□□ -1.9
USP54-206ENST00000433394 ATP6V1G2-DDX39BF2Z307 99 aa3.2□□□□□ -1.9
USP54-206ENST00000433394 F8W036 122 aa3.2□□□□□ -1.9
USP54-206ENST00000433394 TSTD3H0UI37 97 aa3.2□□□□□ -1.9
USP54-206ENST00000433394 J3QLI3 93 aa3.2□□□□□ -1.9
USP54-206ENST00000433394 PSMD12O00232 456 aaPredicted RBP3.2□□□□□ -1.9
USP54-206ENST00000433394 SLC31A1O15431 190 aa3.2□□□□□ -1.9
USP54-206ENST00000433394 PSCAO43653 123 aa3.2□□□□□ -1.9
USP54-206ENST00000433394 CHP2O43745 196 aa3.2□□□□□ -1.9
USP54-206ENST00000433394 BRI3O95415 125 aa3.2□□□□□ -1.9
USP54-206ENST00000433394 IGKV1D-33P01593 117 aa3.2□□□□□ -1.9
USP54-206ENST00000433394 IGKV1-33P01594 117 aa3.2□□□□□ -1.9
USP54-206ENST00000433394 IGHMP01871 453 aa3.2□□□□□ -1.9
USP54-206ENST00000433394 TFPTP0C1Z6 253 aa3.2□□□□□ -1.9
USP54-206ENST00000433394 GADD45AP24522 165 aa3.2□□□□□ -1.9
USP54-206ENST00000433394 AGTR1P30556 359 aa3.2□□□□□ -1.9
USP54-206ENST00000433394 IDH3GP51553 393 aaPredicted RBP3.2□□□□□ -1.9
USP54-206ENST00000433394 SRSF6Q13247 344 aaKnown RBP3.2□□□□□ -1.9
USP54-206ENST00000433394 TAF1AQ15573 450 aaPredicted RBP3.2□□□□□ -1.9
USP54-206ENST00000433394 ACSM3Q53FZ2 586 aa3.2□□□□□ -1.9
USP54-206ENST00000433394 PYDC2Q56P42 97 aa3.2□□□□□ -1.9
USP54-206ENST00000433394 TIMM23BQ5SRD1 257 aa3.2□□□□□ -1.9
USP54-206ENST00000433394 C5orf46Q6UWT4 87 aa3.2□□□□□ -1.9
USP54-206ENST00000433394 STX19Q8N4C7 294 aa3.2□□□□□ -1.9
USP54-206ENST00000433394 EIF4E3Q8N5X7 224 aaKnown RBP3.2□□□□□ -1.9
USP54-206ENST00000433394 TMEM156Q8N614 296 aa3.2□□□□□ -1.9
USP54-206ENST00000433394 PXT1Q8NFP0 134 aa3.2□□□□□ -1.9
USP54-206ENST00000433394 OR5L1Q8NGL2 311 aa3.2□□□□□ -1.9
USP54-206ENST00000433394 OR10J5Q8NHC4 309 aa3.2□□□□□ -1.9
USP54-206ENST00000433394 HIST1H2BAQ96A08 127 aa3.2□□□□□ -1.9
USP54-206ENST00000433394 PTH2Q96A98 100 aa3.2□□□□□ -1.9
USP54-206ENST00000433394 DDA1Q9BW61 102 aa3.2□□□□□ -1.9
USP54-206ENST00000433394 TANC1Q9C0D5 1861 aa3.2□□□□□ -1.9
USP54-206ENST00000433394 MYH10P35580 1976 aa3.2□□□□□ -1.9
USP54-206ENST00000433394 TRBV24-1A0A075B6N3 115 aa3.19□□□□□ -1.9
USP54-206ENST00000433394 IGKV3D-11A0A0A0MRZ8 115 aa3.19□□□□□ -1.9
USP54-206ENST00000433394 A8MWP4 228 aa3.19□□□□□ -1.9
USP54-206ENST00000433394 C8orf87E5RJ46 101 aa3.19□□□□□ -1.9
USP54-206ENST00000433394 H3BMM0 161 aa3.19□□□□□ -1.9
USP54-206ENST00000433394 K7EQS6 105 aa3.19□□□□□ -1.9
USP54-206ENST00000433394 M0QYV0 167 aa3.19□□□□□ -1.9
USP54-206ENST00000433394 CCRL2O00421 344 aa3.19□□□□□ -1.9
USP54-206ENST00000433394 SSNA1O43805 119 aa3.19□□□□□ -1.9
USP54-206ENST00000433394 EPPINO95925 133 aa3.19□□□□□ -1.9
USP54-206ENST00000433394 IGKV4-1P06312 121 aa3.19□□□□□ -1.9
USP54-206ENST00000433394 PAEPP09466 180 aa3.19□□□□□ -1.9
USP54-206ENST00000433394 COX4I1P13073 169 aa3.19□□□□□ -1.9
USP54-206ENST00000433394 CCL5P13501 91 aa3.19□□□□□ -1.9
USP54-206ENST00000433394 TFAMQ00059 246 aaKnown RBP3.19□□□□□ -1.9
USP54-206ENST00000433394 KRR1Q13601 381 aaKnown RBP3.19□□□□□ -1.9
USP54-206ENST00000433394 POU6F1Q14863 301 aa3.19□□□□□ -1.9
USP54-206ENST00000433394 DNM1P34Q6PK57 102 aa3.19□□□□□ -1.9
USP54-206ENST00000433394 ALKAL1Q6UXT8 129 aa3.19□□□□□ -1.9
USP54-206ENST00000433394 TMEM86AQ8N2M4 240 aa3.19□□□□□ -1.9
USP54-206ENST00000433394 LINC00304Q8N9R0 145 aa3.19□□□□□ -1.9
USP54-206ENST00000433394 OR51D1Q8NGF3 324 aa3.19□□□□□ -1.9
USP54-206ENST00000433394 LHFPL5Q8TAF8 219 aa3.19□□□□□ -1.9
USP54-206ENST00000433394 UBE2WQ96B02 151 aa3.19□□□□□ -1.9
USP54-206ENST00000433394 TVP23CQ96ET8 276 aa3.19□□□□□ -1.9
USP54-206ENST00000433394 PFDN5Q99471 154 aa3.19□□□□□ -1.9
USP54-206ENST00000433394 ARL6Q9H0F7 186 aa3.19□□□□□ -1.9
USP54-206ENST00000433394 ZNF586Q9NXT0 402 aa3.19□□□□□ -1.9
USP54-206ENST00000433394 H3BSA7 217 aa3.18□□□□□ -1.9
USP54-206ENST00000433394 BHLHE40O14503 412 aa3.18□□□□□ -1.9
USP54-206ENST00000433394 TGOLN2O43493 480 aa3.18□□□□□ -1.9
USP54-206ENST00000433394 FADS1O60427 444 aa3.18□□□□□ -1.9
USP54-206ENST00000433394 TCRBP04435 133 aa3.18□□□□□ -1.9
USP54-206ENST00000433394 FAM228BP0C875 321 aa3.18□□□□□ -1.9
USP54-206ENST00000433394 CXCL8P10145 99 aa3.18□□□□□ -1.9
USP54-206ENST00000433394 CTSEP14091 401 aa3.18□□□□□ -1.9
USP54-206ENST00000433394 CD99P14209 185 aa3.18□□□□□ -1.9
USP54-206ENST00000433394 ZNF708P17019 499 aa3.18□□□□□ -1.9
USP54-206ENST00000433394 S100PP25815 95 aa3.18□□□□□ -1.9
USP54-206ENST00000433394 COILP38432 576 aaPredicted RBP3.18□□□□□ -1.9
USP54-206ENST00000433394 AKR1C2P52895 323 aa3.18□□□□□ -1.9
USP54-206ENST00000433394 FOXA1P55317 472 aa3.18□□□□□ -1.9
USP54-206ENST00000433394 LSM6P62312 80 aaKnown RBP3.18□□□□□ -1.9
USP54-206ENST00000433394 C1DQ13901 141 aaKnown RBP3.18□□□□□ -1.9
USP54-206ENST00000433394 PYCR3Q53H96 274 aa3.18□□□□□ -1.9
USP54-206ENST00000433394 RPL13AP3Q6NVV1 102 aa3.18□□□□□ -1.9
USP54-206ENST00000433394 WDR59Q6PJI9 974 aa3.18□□□□□ -1.9
USP54-206ENST00000433394 SCGB1D4Q6XE38 83 aa3.18□□□□□ -1.9
USP54-206ENST00000433394 ADM2Q7Z4H4 148 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms