RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 MYOGP15173 224 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 ZNF137PP52743 207 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 MESP2Q0VG99 397 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 ARPC1AQ92747 370 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 HRKO00198 91 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 FAM157CP0CG43 387 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 TSPO2Q5TGU0 170 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 LCN10Q6JVE6 187 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 DOK4Q8TEW6 326 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 TTTY10Q9BZA0 68 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 PRO3102Q9H379 93 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 ST20Q9HBF5 79 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 TMEM140Q9NV12 185 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 ZNF492Q9P255 531 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 PUS1Q9Y606 427 aaKnown RBP eCLIP3.17□□□□□ -1.9
SHPRH-205ENST00000433355 PRRC2AP48634 2157 aaKnown RBP3.17□□□□□ -1.9
SHPRH-205ENST00000433355 SMPD2O60906 423 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 STAG3L3P0CL85 134 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 TCTAP57738 103 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 CCL20P78556 96 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 OR51G1Q8NGK1 321 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 TMEM14BQ9NUH8 114 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 RALYQ9UKM9 306 aaKnown RBP3.17□□□□□ -1.9
SHPRH-205ENST00000433355 BRI3O95415 125 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 TRGC2P03986 189 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 FAM106CPP0CH98 169 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 DUTP33316 252 aaKnown RBP3.17□□□□□ -1.9
SHPRH-205ENST00000433355 ST6GALNAC3Q8NDV1 305 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 CHCHD1Q96BP2 118 aaKnown RBP3.17□□□□□ -1.9
SHPRH-205ENST00000433355 GFI1Q99684 422 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 SP9P0CG40 484 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 ID1P41134 155 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 SRYQ05066 204 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 STPG1Q5TH74 334 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 ANKRD34AQ69YU3 496 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 MTURNQ8N3F0 131 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 PIMREGQ9BSJ6 248 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 DERL1Q9BUN8 251 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 UQCR10Q9UDW1 63 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 ARG1P05089 322 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 TCL1AP56279 114 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 C3AR1Q16581 482 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 CORO6Q6QEF8 472 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 TMEM167AQ8TBQ9 72 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 SIGLEC12Q96PQ1 595 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 UBE2L5PA0A1B0GUS4 154 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 RBAKDNA6NC62 111 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 F2Z2F3 143 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 SLC31A2O15432 143 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 MAGEA5P43359 124 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 EFNB2P52799 333 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 LSM11P83369 360 aaKnown RBP eCLIP3.16□□□□□ -1.9
SHPRH-205ENST00000433355 ZNF154Q13106 437 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 BAGE3Q86Y29 109 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 BAGE2Q86Y30 109 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 MRPL53Q96EL3 112 aaKnown RBP3.16□□□□□ -1.9
SHPRH-205ENST00000433355 HARBI1Q96MB7 349 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 C12orf57Q99622 126 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 C12orf77C9JDV5 145 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 WNT9BO14905 357 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 CEACAM8P31997 349 aaPredicted RBP3.16□□□□□ -1.9
SHPRH-205ENST00000433355 WFDC12Q8WWY7 111 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 SEC22AQ96IW7 307 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 SPRY4Q9C004 299 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 PCSK5Q92824 1860 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 TRAV34A0A0B4J273 112 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 EPOPA6NHQ4 379 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 KIAA1324LA8MWY0 1029 aaPredicted RBP3.16□□□□□ -1.9
SHPRH-205ENST00000433355 K7ERU9 68 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 CXCL1P09341 107 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 NPSP0C0P6 89 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 ARL16Q0P5N6 197 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 C1QL3Q5VWW1 255 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 SLC25A33Q9BSK2 321 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 FAAP24Q9BTP7 215 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 NPFFR1Q9GZQ6 430 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 PPIAL4AQ9Y536 164 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 NKX2-6A6NCS4 301 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 ZFP92A6NM28 416 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 DLX6P56179 175 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 YPEL3P61236 119 aaPredicted RBP3.16□□□□□ -1.9
SHPRH-205ENST00000433355 MDP1Q86V88 176 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 LRP11Q86VZ4 500 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 FBXO17Q96EF6 278 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 ASCL2Q99929 193 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 SLC25A39Q9BZJ4 359 aaPredicted RBP3.16□□□□□ -1.9
SHPRH-205ENST00000433355 MS4A7Q9GZW8 240 aaPredicted RBP3.16□□□□□ -1.9
SHPRH-205ENST00000433355 LY6G6EA0A0G2JKS1 128 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 A8MV72 311 aaPredicted RBP3.16□□□□□ -1.9
SHPRH-205ENST00000433355 BMP5P22003 454 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 HTR1DP28221 377 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 IZUMO4Q1ZYL8 232 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 WDR82Q6UXN9 313 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 OR9G4Q8NGQ1 327 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 OR1B1Q8NGR6 318 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 NUDT8Q8WV74 236 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 ABHD17AQ96GS6 310 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 DUSP13Q9UII6 198 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 HIGD1AQ9Y241 93 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 U3KQA8 63 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms