RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 Q71RC1 249 aaPredicted RBP21.07■□□□□ 0.96
TMEM248-205ENST00000433271 SIGLECL1Q8N7X8 197 aa21.07■□□□□ 0.96
TMEM248-205ENST00000433271 Q8N9W7 124 aa21.07■□□□□ 0.96
TMEM248-205ENST00000433271 ZFP57Q9NU63 452 aa21.07■□□□□ 0.96
TMEM248-205ENST00000433271 HSPB7Q9UBY9 170 aa21.07■□□□□ 0.96
TMEM248-205ENST00000433271 ZNF257Q9Y2Q1 563 aa21.07■□□□□ 0.96
TMEM248-205ENST00000433271 OR51B2Q9Y5P1 312 aa21.07■□□□□ 0.96
TMEM248-205ENST00000433271 TNFRSF9Q07011 255 aa21.07■□□□□ 0.96
TMEM248-205ENST00000433271 FGL1Q08830 312 aa21.07■□□□□ 0.96
TMEM248-205ENST00000433271 LRRC37A5PQ49AS3 106 aa21.07■□□□□ 0.96
TMEM248-205ENST00000433271 OR52E5Q8NH55 327 aa21.07■□□□□ 0.96
TMEM248-205ENST00000433271 MOB4Q9Y3A3 225 aa21.07■□□□□ 0.96
TMEM248-205ENST00000433271 NXPH3O95157 252 aa21.06■□□□□ 0.96
TMEM248-205ENST00000433271 MAS1LP35410 378 aa21.06■□□□□ 0.96
TMEM248-205ENST00000433271 CLCC1Q96S66 551 aa21.06■□□□□ 0.96
TMEM248-205ENST00000433271 COMMD5Q9GZQ3 224 aa21.06■□□□□ 0.96
TMEM248-205ENST00000433271 POMT1Q9Y6A1 747 aa21.06■□□□□ 0.96
TMEM248-205ENST00000433271 FCN1O00602 326 aa21.05■□□□□ 0.96
TMEM248-205ENST00000433271 FGF16O43320 207 aa21.05■□□□□ 0.96
TMEM248-205ENST00000433271 HOXA3O43365 443 aaPredicted RBP21.05■□□□□ 0.96
TMEM248-205ENST00000433271 MPC2O95563 127 aa21.05■□□□□ 0.96
TMEM248-205ENST00000433271 SPCS3P61009 180 aa21.05■□□□□ 0.96
TMEM248-205ENST00000433271 HSPE1P61604 102 aaKnown RBP21.05■□□□□ 0.96
TMEM248-205ENST00000433271 PDLIM3Q53GG5 364 aaPredicted RBP21.05■□□□□ 0.96
TMEM248-205ENST00000433271 Q5BKY6 102 aa21.05■□□□□ 0.96
TMEM248-205ENST00000433271 RBMS3Q6XE24 437 aaKnown RBP21.05■□□□□ 0.96
TMEM248-205ENST00000433271 C16orf82Q7Z2V1 217 aa21.05■□□□□ 0.96
TMEM248-205ENST00000433271 OR5B3Q8NH48 314 aa21.05■□□□□ 0.96
TMEM248-205ENST00000433271 SMLR1H3BR10 107 aa21.04■□□□□ 0.96
TMEM248-205ENST00000433271 K7EPK0 472 aa21.04■□□□□ 0.96
TMEM248-205ENST00000433271 ACTL6BO94805 426 aa21.04■□□□□ 0.96
TMEM248-205ENST00000433271 IFNA17P01571 189 aa21.04■□□□□ 0.96
TMEM248-205ENST00000433271 S100A10P60903 97 aa21.04■□□□□ 0.96
TMEM248-205ENST00000433271 RASL11BQ9BPW5 248 aa21.04■□□□□ 0.96
TMEM248-205ENST00000433271 NSD1Q96L73 2696 aaPredicted RBP21.04■□□□□ 0.96
TMEM248-205ENST00000433271 ANK3Q12955 4377 aaKnown RBP21.04■□□□□ 0.96
TMEM248-205ENST00000433271 TEX50A0A1B0GTY4 177 aa21.04■□□□□ 0.96
TMEM248-205ENST00000433271 M0QZK8 103 aa21.04■□□□□ 0.96
TMEM248-205ENST00000433271 C5orf56Q8N8D9 126 aa21.04■□□□□ 0.96
TMEM248-205ENST00000433271 MAGT1Q9H0U3 335 aa21.04■□□□□ 0.96
TMEM248-205ENST00000433271 VPREB3Q9UKI3 123 aa21.04■□□□□ 0.96
TMEM248-205ENST00000433271 INAFM1C9JVW0 142 aa21.03■□□□□ 0.96
TMEM248-205ENST00000433271 G3V3Q6 166 aa21.03■□□□□ 0.96
TMEM248-205ENST00000433271 MED6O75586 246 aa21.03■□□□□ 0.96
TMEM248-205ENST00000433271 PET100P0DJ07 73 aa21.03■□□□□ 0.96
TMEM248-205ENST00000433271 MYOD1P15172 320 aa21.03■□□□□ 0.96
TMEM248-205ENST00000433271 COMPP49747 757 aaPredicted RBP21.03■□□□□ 0.96
TMEM248-205ENST00000433271 POLR2GP62487 172 aaKnown RBP eCLIP21.03■□□□□ 0.96
TMEM248-205ENST00000433271 TMEM86BQ8N661 226 aa21.03■□□□□ 0.96
TMEM248-205ENST00000433271 OR1L8Q8NGR8 309 aa21.03■□□□□ 0.96
TMEM248-205ENST00000433271 LSM5Q9Y4Y9 91 aaKnown RBP21.03■□□□□ 0.96
TMEM248-205ENST00000433271 MAST4O15021 2626 aa21.02■□□□□ 0.96
TMEM248-205ENST00000433271 TRAV14DV4A0A0A6YYC5 116 aa21.02■□□□□ 0.96
TMEM248-205ENST00000433271 CA2P00918 260 aa21.02■□□□□ 0.96
TMEM248-205ENST00000433271 HLA-DRB1P01911 266 aa21.02■□□□□ 0.96
TMEM248-205ENST00000433271 TNXAQ16473 311 aa21.02■□□□□ 0.96
TMEM248-205ENST00000433271 ZNF562Q6V9R5 426 aa21.02■□□□□ 0.96
TMEM248-205ENST00000433271 RCL1Q9Y2P8 373 aaKnown RBP21.02■□□□□ 0.96
TMEM248-205ENST00000433271 PLXNB1O43157 2135 aa21.02■□□□□ 0.95
TMEM248-205ENST00000433271 WRBO00258 174 aa21.01■□□□□ 0.95
TMEM248-205ENST00000433271 SYNGR2O43760 224 aa21.01■□□□□ 0.95
TMEM248-205ENST00000433271 DEDDO75618 318 aa21.01■□□□□ 0.95
TMEM248-205ENST00000433271 OPN1MWP04001 364 aa21.01■□□□□ 0.95
TMEM248-205ENST00000433271 RLN2P04090 185 aa21.01■□□□□ 0.95
TMEM248-205ENST00000433271 OPN1MW2P0DN77 364 aa21.01■□□□□ 0.95
TMEM248-205ENST00000433271 OPN1MW3P0DN78 364 aa21.01■□□□□ 0.95
TMEM248-205ENST00000433271 RNF126Q9BV68 326 aa21.01■□□□□ 0.95
TMEM248-205ENST00000433271 RBKSQ9H477 322 aa21.01■□□□□ 0.95
TMEM248-205ENST00000433271 H0YIZ8 118 aa21■□□□□ 0.95
TMEM248-205ENST00000433271 CHST1O43916 411 aa21■□□□□ 0.95
TMEM248-205ENST00000433271 AMY1AP04745 511 aa21■□□□□ 0.95
TMEM248-205ENST00000433271 GNB1P62873 340 aa21■□□□□ 0.95
TMEM248-205ENST00000433271 SSBP2P81877 361 aaPredicted RBP21■□□□□ 0.95
TMEM248-205ENST00000433271 PRCDQ00LT1 54 aa21■□□□□ 0.95
TMEM248-205ENST00000433271 C11orf87Q6NUJ2 197 aa21■□□□□ 0.95
TMEM248-205ENST00000433271 THAP6Q8TBB0 222 aa21■□□□□ 0.95
TMEM248-205ENST00000433271 NDUFA4L2Q9NRX3 87 aa21■□□□□ 0.95
TMEM248-205ENST00000433271 TNFRSF19Q9NS68 423 aa21■□□□□ 0.95
TMEM248-205ENST00000433271 TET2Q6N021 2002 aaPredicted RBP21■□□□□ 0.95
TMEM248-205ENST00000433271 CEBPZOSA8MTT3 80 aa21■□□□□ 0.95
TMEM248-205ENST00000433271 CX3CL1P78423 397 aa21■□□□□ 0.95
TMEM248-205ENST00000433271 C10orf55Q5SWW7 151 aa21■□□□□ 0.95
TMEM248-205ENST00000433271 SSSCA1O60232 199 aa20.99■□□□□ 0.95
TMEM248-205ENST00000433271 CNIH1O95406 144 aa20.99■□□□□ 0.95
TMEM248-205ENST00000433271 C1QBP02746 253 aa20.99■□□□□ 0.95
TMEM248-205ENST00000433271 RPL27AP46776 148 aaKnown RBP20.99■□□□□ 0.95
TMEM248-205ENST00000433271 SPINK9Q5DT21 86 aa20.99■□□□□ 0.95
TMEM248-205ENST00000433271 PRSS54Q6PEW0 395 aa20.99■□□□□ 0.95
TMEM248-205ENST00000433271 RAB40CQ96S21 281 aa20.99■□□□□ 0.95
TMEM248-205ENST00000433271 HINT2Q9BX68 163 aa20.99■□□□□ 0.95
TMEM248-205ENST00000433271 OR5AC2Q9NZP5 309 aa20.99■□□□□ 0.95
TMEM248-205ENST00000433271 MBD2Q9UBB5 411 aa20.99■□□□□ 0.95
TMEM248-205ENST00000433271 E7EUB6 86 aa20.98■□□□□ 0.95
TMEM248-205ENST00000433271 SLC25A4P12235 298 aa20.98■□□□□ 0.95
TMEM248-205ENST00000433271 FXYD3Q14802 87 aa20.98■□□□□ 0.95
TMEM248-205ENST00000433271 DTD1Q8TEA8 209 aa20.98■□□□□ 0.95
TMEM248-205ENST00000433271 ZFHX3Q15911 3703 aa20.97■□□□□ 0.95
TMEM248-205ENST00000433271 LYL1P12980 280 aa20.97■□□□□ 0.95
TMEM248-205ENST00000433271 PVALBP20472 110 aaPredicted RBP20.97■□□□□ 0.95
TMEM248-205ENST00000433271 SRSF12Q8WXF0 261 aaKnown RBP20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms