RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 FABP4P15090 132 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 GPX2P18283 190 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 TUBG1P23258 451 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 NFYBP25208 207 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 PEBP1P30086 187 aaKnown RBP3.07□□□□□ -1.92
HMGB3-203ENST00000430118 KIR2DS4P43632 304 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 TFPI2P48307 235 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 SULT1A1P50225 295 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 DAPP51397 102 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 FBXW4P57775 412 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 TAS2R19P59542 299 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 RAB11AP62491 216 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 SLC35A1P78382 337 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 H3F3AP84243 136 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 CDK5Q00535 292 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 PAX5Q02548 391 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 ST3GAL4Q11206 333 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 CLINT1Q14677 625 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 PGGHGQ32M88 737 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 SLC36A2Q495M3 483 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 SLC22A6Q4U2R8 563 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 OR2G6Q5TZ20 316 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 OR2T5Q6IEZ7 315 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 ACOT7LQ6ZUV0 252 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 SLC25A26Q70HW3 274 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 SLC35E3Q7Z769 313 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 B3GNT7Q8NFL0 401 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 OR2T29Q8NH02 315 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 OR51Q1Q8NH59 317 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 LYPD6BQ8NI32 183 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 HAVCR2Q8TDQ0 301 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 SKA2Q8WVK7 121 aaPredicted RBP3.07□□□□□ -1.92
HMGB3-203ENST00000430118 CACNG8Q8WXS5 425 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 ANKRD9Q96BM1 317 aaPredicted RBP3.07□□□□□ -1.92
HMGB3-203ENST00000430118 GPR146Q96CH1 333 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 MUCL1Q96DR8 90 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 ACY3Q96HD9 319 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 SMIM10Q96HG1 83 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 ITCHQ96J02 903 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 KIR2DL4Q99706 377 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 VGLL1Q99990 258 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 PAXXQ9BUH6 204 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 FAIM2Q9BWQ8 316 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 FXYD6Q9H0Q3 95 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 RAB1BQ9H0U4 201 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 ISG20L2Q9H9L3 353 aaKnown RBP3.07□□□□□ -1.92
HMGB3-203ENST00000430118 HRASLSQ9HDD0 168 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 EXOSC4Q9NPD3 245 aaKnown RBP3.07□□□□□ -1.92
HMGB3-203ENST00000430118 RPS10P5Q9NQ39 176 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 TUBG2Q9NRH3 451 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 SPANXA1Q9NS26 97 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 AIG1Q9NVV5 245 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 VPS29Q9UBQ0 182 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 TNFSF18Q9UNG2 199 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 YARS2Q9Y2Z4 477 aaKnown RBP3.07□□□□□ -1.92
HMGB3-203ENST00000430118 MEGF8Q7Z7M0 2845 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 GTF3C1Q12789 2109 aa3.07□□□□□ -1.92
HMGB3-203ENST00000430118 IGLV8-61A0A075B6I0 122 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 IGLV3-16A0A075B6K0 115 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 TRAV25A0A0B4J276 109 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 TMEM213A2RRL7 107 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 H0YGG7 62 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 RNASEK-C17orf49H0YIS7 233 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 CORTO00230 105 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 GABRPO00591 440 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 TNFSF13O75888 250 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 C1orf105O95561 183 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 FABP3P05413 133 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 OR13C7P0DN81 318 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 CD37P11049 281 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 SLC25A16P16260 332 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 PSMB1P20618 241 aaKnown RBP3.06□□□□□ -1.92
HMGB3-203ENST00000430118 GSTM3P21266 225 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 VDAC1P21796 283 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 CRYGSP22914 178 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 IMPA1P29218 277 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 OR10J1P30954 320 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 LGALS7P47929 136 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 ZNF136P52737 540 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 CRYBA4P53673 196 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 RPS15AP62244 130 aaKnown RBP3.06□□□□□ -1.92
HMGB3-203ENST00000430118 SNRPGP62308 76 aaKnown RBP3.06□□□□□ -1.92
HMGB3-203ENST00000430118 CXCL6P80162 114 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 RAB31Q13636 194 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 TMEM249Q2WGJ8 235 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 C18orf21Q32NC0 220 aaPredicted RBP3.06□□□□□ -1.92
HMGB3-203ENST00000430118 COX19Q49B96 90 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 ZNF658BQ4V348 819 aaPredicted RBP3.06□□□□□ -1.92
HMGB3-203ENST00000430118 GFI1BQ5VTD9 330 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 GLT8D1Q68CQ7 371 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 HBMQ6B0K9 141 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 OPN5Q6U736 354 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 ZNF497Q6ZNH5 498 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 TEX43Q6ZNM6 134 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 HRNRQ86YZ3 2850 aaPredicted RBP3.06□□□□□ -1.92
HMGB3-203ENST00000430118 RBM45Q8IUH3 476 aaKnown RBP3.06□□□□□ -1.92
HMGB3-203ENST00000430118 HS3ST5Q8IZT8 346 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 TMEM251Q8N6I4 163 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.06□□□□□ -1.92
HMGB3-203ENST00000430118 LINC01555Q8NAE3 123 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms