RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 TIMM29Q9BSF4 260 aa7.41□□□□□ -1.22
CDC42BPA-206ENST00000429440 COL25A1Q9BXS0 654 aaPredicted RBP7.41□□□□□ -1.22
CDC42BPA-206ENST00000429440 CDIP1Q9H305 208 aa7.41□□□□□ -1.22
CDC42BPA-206ENST00000429440 GON4LQ3T8J9 2241 aa7.41□□□□□ -1.22
CDC42BPA-206ENST00000429440 TRAV36DV7A0A075B6V5 113 aa7.4□□□□□ -1.22
CDC42BPA-206ENST00000429440 TRGV10A0A0A0MS01 117 aa7.4□□□□□ -1.22
CDC42BPA-206ENST00000429440 SMIM27A0A1W2PRY6 76 aa7.4□□□□□ -1.22
CDC42BPA-206ENST00000429440 EPOPA6NHQ4 379 aa7.4□□□□□ -1.22
CDC42BPA-206ENST00000429440 KLF7O75840 302 aaPredicted RBP7.4□□□□□ -1.22
CDC42BPA-206ENST00000429440 OR2J3O76001 311 aa7.4□□□□□ -1.22
CDC42BPA-206ENST00000429440 EML2O95834 649 aa7.4□□□□□ -1.22
CDC42BPA-206ENST00000429440 IGHV3-7P01780 117 aa7.4□□□□□ -1.22
CDC42BPA-206ENST00000429440 CT62P0C5K7 136 aa7.4□□□□□ -1.22
CDC42BPA-206ENST00000429440 WFDC2Q14508 124 aa7.4□□□□□ -1.22
CDC42BPA-206ENST00000429440 ABHD17BQ5VST6 288 aa7.4□□□□□ -1.22
CDC42BPA-206ENST00000429440 RNASEKQ6P5S7 137 aaKnown RBP7.4□□□□□ -1.22
CDC42BPA-206ENST00000429440 TMEM14EPQ6UXP3 125 aa7.4□□□□□ -1.22
CDC42BPA-206ENST00000429440 ZNF645Q8N7E2 425 aa7.4□□□□□ -1.22
CDC42BPA-206ENST00000429440 ZNF502Q8TBZ5 544 aa7.4□□□□□ -1.22
CDC42BPA-206ENST00000429440 CHCHD1Q96BP2 118 aaKnown RBP7.4□□□□□ -1.22
CDC42BPA-206ENST00000429440 TMEM147Q9BVK8 224 aa7.4□□□□□ -1.22
CDC42BPA-206ENST00000429440 ZNF331Q9NQX6 463 aaPredicted RBP7.4□□□□□ -1.22
CDC42BPA-206ENST00000429440 MYO15AQ9UKN7 3530 aa7.4□□□□□ -1.22
CDC42BPA-206ENST00000429440 ARHGEF17Q96PE2 2063 aaPredicted RBP7.4□□□□□ -1.22
CDC42BPA-206ENST00000429440 KIAA1549Q9HCM3 1950 aa7.4□□□□□ -1.22
CDC42BPA-206ENST00000429440 MED12LQ86YW9 2145 aa7.4□□□□□ -1.23
CDC42BPA-206ENST00000429440 RALGAPA1Q6GYQ0 2036 aa7.4□□□□□ -1.23
CDC42BPA-206ENST00000429440 VCANP13611 3396 aa7.4□□□□□ -1.23
CDC42BPA-206ENST00000429440 A0A087WX48 190 aa7.4□□□□□ -1.23
CDC42BPA-206ENST00000429440 A0A1W2PRD5 423 aa7.4□□□□□ -1.23
CDC42BPA-206ENST00000429440 A0A1W2PRF3 423 aa7.4□□□□□ -1.23
CDC42BPA-206ENST00000429440 A0A1W2PRM7 423 aa7.4□□□□□ -1.23
CDC42BPA-206ENST00000429440 F5H5K5 113 aa7.4□□□□□ -1.23
CDC42BPA-206ENST00000429440 B3GALT2O43825 422 aa7.4□□□□□ -1.23
CDC42BPA-206ENST00000429440 LEPROTL1O95214 131 aa7.4□□□□□ -1.23
CDC42BPA-206ENST00000429440 SMIM13P0DJ93 91 aa7.4□□□□□ -1.23
CDC42BPA-206ENST00000429440 CT45A6P0DMU7 189 aa7.4□□□□□ -1.23
CDC42BPA-206ENST00000429440 CT45A5P0DMU8 189 aa7.4□□□□□ -1.23
CDC42BPA-206ENST00000429440 CT45A7P0DMV0 189 aa7.4□□□□□ -1.23
CDC42BPA-206ENST00000429440 FGF6P10767 208 aa7.4□□□□□ -1.23
CDC42BPA-206ENST00000429440 RPS18P62269 152 aaKnown RBP7.4□□□□□ -1.23
CDC42BPA-206ENST00000429440 GNG3P63215 75 aa7.4□□□□□ -1.23
CDC42BPA-206ENST00000429440 CT45A1Q5HYN5 189 aa7.4□□□□□ -1.23
CDC42BPA-206ENST00000429440 CT45A3Q8NHU0 189 aa7.4□□□□□ -1.23
CDC42BPA-206ENST00000429440 NT5CQ8TCD5 201 aa7.4□□□□□ -1.23
CDC42BPA-206ENST00000429440 GTSF1Q8WW33 167 aa7.4□□□□□ -1.23
CDC42BPA-206ENST00000429440 RERGQ96A58 199 aaPredicted RBP7.4□□□□□ -1.23
CDC42BPA-206ENST00000429440 MAP1LC3CQ9BXW4 147 aa7.4□□□□□ -1.23
CDC42BPA-206ENST00000429440 FGF22Q9HCT0 170 aa7.4□□□□□ -1.23
CDC42BPA-206ENST00000429440 GCM1Q9NP62 436 aa7.4□□□□□ -1.23
CDC42BPA-206ENST00000429440 MTCH1Q9NZJ7 389 aa7.4□□□□□ -1.23
CDC42BPA-206ENST00000429440 RABAC1Q9UI14 185 aa7.4□□□□□ -1.23
CDC42BPA-206ENST00000429440 R4GN57 208 aa7.4□□□□□ -1.23
CDC42BPA-206ENST00000429440 ARHGAP21Q5T5U3 1957 aa7.4□□□□□ -1.23
CDC42BPA-206ENST00000429440 CPAMD8Q8IZJ3 1885 aa7.39□□□□□ -1.23
CDC42BPA-206ENST00000429440 A0A1W2PQU0 124 aa7.39□□□□□ -1.23
CDC42BPA-206ENST00000429440 GAGE12JA6NER3 117 aa7.39□□□□□ -1.23
CDC42BPA-206ENST00000429440 B9A039 149 aa7.39□□□□□ -1.23
CDC42BPA-206ENST00000429440 RER1O15258 196 aa7.39□□□□□ -1.23
CDC42BPA-206ENST00000429440 LINC01565O15544 149 aa7.39□□□□□ -1.23
CDC42BPA-206ENST00000429440 NEURL1O76050 574 aa7.39□□□□□ -1.23
CDC42BPA-206ENST00000429440 GAGE7O76087 117 aa7.39□□□□□ -1.23
CDC42BPA-206ENST00000429440 GAGE12FP0CL80 117 aa7.39□□□□□ -1.23
CDC42BPA-206ENST00000429440 GAGE12GP0CL81 117 aa7.39□□□□□ -1.23
CDC42BPA-206ENST00000429440 GAGE12IP0CL82 117 aa7.39□□□□□ -1.23
CDC42BPA-206ENST00000429440 GAGE4Q13068 117 aa7.39□□□□□ -1.23
CDC42BPA-206ENST00000429440 TEPPQ6URK8 271 aa7.39□□□□□ -1.23
CDC42BPA-206ENST00000429440 Q6ZUT4 128 aa7.39□□□□□ -1.23
CDC42BPA-206ENST00000429440 CA13Q8N1Q1 262 aa7.39□□□□□ -1.23
CDC42BPA-206ENST00000429440 OR4C3Q8NH37 302 aa7.39□□□□□ -1.23
CDC42BPA-206ENST00000429440 RAB37Q96AX2 223 aa7.39□□□□□ -1.23
CDC42BPA-206ENST00000429440 TM2D2Q9BX73 214 aa7.39□□□□□ -1.23
CDC42BPA-206ENST00000429440 TMEM133Q9H2Q1 129 aa7.39□□□□□ -1.23
CDC42BPA-206ENST00000429440 LYRM4Q9HD34 91 aa7.39□□□□□ -1.23
CDC42BPA-206ENST00000429440 PHPT1Q9NRX4 125 aaPredicted RBP7.39□□□□□ -1.23
CDC42BPA-206ENST00000429440 B4GALT7Q9UBV7 327 aa7.39□□□□□ -1.23
CDC42BPA-206ENST00000429440 VPREB3Q9UKI3 123 aa7.39□□□□□ -1.23
CDC42BPA-206ENST00000429440 TRAV25A0A0B4J276 109 aa7.39□□□□□ -1.23
CDC42BPA-206ENST00000429440 A0A0G2JRQ6 117 aa7.39□□□□□ -1.23
CDC42BPA-206ENST00000429440 SCO2A0A1W2PP80 73 aa7.39□□□□□ -1.23
CDC42BPA-206ENST00000429440 IZUMO1RA6ND01 250 aa7.39□□□□□ -1.23
CDC42BPA-206ENST00000429440 IAPPP10997 89 aa7.39□□□□□ -1.23
CDC42BPA-206ENST00000429440 ZNF121P58317 390 aaPredicted RBP7.39□□□□□ -1.23
CDC42BPA-206ENST00000429440 ETDBQ3ZM63 59 aa7.39□□□□□ -1.23
CDC42BPA-206ENST00000429440 PDLIM3Q53GG5 364 aaPredicted RBP7.39□□□□□ -1.23
CDC42BPA-206ENST00000429440 TMEM196Q5HYL7 178 aa7.39□□□□□ -1.23
CDC42BPA-206ENST00000429440 GCSAMLQ5JQS6 135 aa7.39□□□□□ -1.23
CDC42BPA-206ENST00000429440 LINC01545Q5VT33 79 aa7.39□□□□□ -1.23
CDC42BPA-206ENST00000429440 HLA-DQA1Q5Y7H0 255 aa7.39□□□□□ -1.23
CDC42BPA-206ENST00000429440 TMEM211Q6ICI0 200 aa7.39□□□□□ -1.23
CDC42BPA-206ENST00000429440 VN1R4Q7Z5H5 301 aa7.39□□□□□ -1.23
CDC42BPA-206ENST00000429440 SHISA5Q8N114 240 aa7.39□□□□□ -1.23
CDC42BPA-206ENST00000429440 GAPTQ8N292 157 aa7.39□□□□□ -1.23
CDC42BPA-206ENST00000429440 ATP6V0E2Q8NHE4 81 aa7.39□□□□□ -1.23
CDC42BPA-206ENST00000429440 VSTM2LQ96N03 204 aa7.39□□□□□ -1.23
CDC42BPA-206ENST00000429440 ERRFI1Q9UJM3 462 aaPredicted RBP7.39□□□□□ -1.23
CDC42BPA-206ENST00000429440 FAM90A26D6RGX4 464 aa7.38□□□□□ -1.23
CDC42BPA-206ENST00000429440 SNAI2O43623 268 aa7.38□□□□□ -1.23
CDC42BPA-206ENST00000429440 IGHG1P01857 330 aa7.38□□□□□ -1.23
CDC42BPA-206ENST00000429440 COL9A1P20849 921 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms