RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 TMEM167AQ8TBQ9 72 aa7.09□□□□□ -1.27
SMC6-204ENST00000428868 PIFOQ8TCI5 191 aa7.09□□□□□ -1.27
SMC6-204ENST00000428868 OR4C12Q96R67 309 aa7.09□□□□□ -1.27
SMC6-204ENST00000428868 MFFQ9GZY8 342 aa7.09□□□□□ -1.27
SMC6-204ENST00000428868 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.09□□□□□ -1.27
SMC6-204ENST00000428868 TMEM14BQ9NUH8 114 aa7.09□□□□□ -1.27
SMC6-204ENST00000428868 METTL1Q9UBP6 276 aaKnown RBP7.09□□□□□ -1.27
SMC6-204ENST00000428868 TCF19Q9Y242 345 aa7.09□□□□□ -1.27
SMC6-204ENST00000428868 FOXA2Q9Y261 457 aaPredicted RBP7.09□□□□□ -1.27
SMC6-204ENST00000428868 TEX50A0A1B0GTY4 177 aa7.08□□□□□ -1.28
SMC6-204ENST00000428868 SH2D7A6NKC9 451 aaPredicted RBP7.08□□□□□ -1.28
SMC6-204ENST00000428868 E5RGE8 158 aa7.08□□□□□ -1.28
SMC6-204ENST00000428868 MOSP00540 346 aa7.08□□□□□ -1.28
SMC6-204ENST00000428868 TMEM11P17152 192 aa7.08□□□□□ -1.28
SMC6-204ENST00000428868 VDAC2P45880 294 aaPredicted RBP7.08□□□□□ -1.28
SMC6-204ENST00000428868 ARL16Q0P5N6 197 aa7.08□□□□□ -1.28
SMC6-204ENST00000428868 EBI3Q14213 229 aa7.08□□□□□ -1.28
SMC6-204ENST00000428868 HES1Q14469 280 aa7.08□□□□□ -1.28
SMC6-204ENST00000428868 MMDQ15546 238 aa7.08□□□□□ -1.28
SMC6-204ENST00000428868 VMA21Q3ZAQ7 101 aa7.08□□□□□ -1.28
SMC6-204ENST00000428868 CCDC144NLQ6NUI1 221 aa7.08□□□□□ -1.28
SMC6-204ENST00000428868 C19orf35Q6ZS72 473 aa7.08□□□□□ -1.28
SMC6-204ENST00000428868 TMUB2Q71RG4 321 aa7.08□□□□□ -1.28
SMC6-204ENST00000428868 HAPLN4Q86UW8 402 aa7.08□□□□□ -1.28
SMC6-204ENST00000428868 TMEM219Q86XT9 240 aa7.08□□□□□ -1.28
SMC6-204ENST00000428868 OR10W1Q8NGF6 305 aa7.08□□□□□ -1.28
SMC6-204ENST00000428868 TMEM170AQ8WVE7 144 aa7.08□□□□□ -1.28
SMC6-204ENST00000428868 ZNF48Q96MX3 618 aaPredicted RBP7.08□□□□□ -1.28
SMC6-204ENST00000428868 SMR3AQ99954 134 aa7.08□□□□□ -1.28
SMC6-204ENST00000428868 SMIM3Q9BZL3 60 aa7.08□□□□□ -1.28
SMC6-204ENST00000428868 SIGLEC9Q9Y336 463 aa7.08□□□□□ -1.28
SMC6-204ENST00000428868 OR51B2Q9Y5P1 312 aa7.08□□□□□ -1.28
SMC6-204ENST00000428868 HIVEP1P15822 2718 aa7.07□□□□□ -1.28
SMC6-204ENST00000428868 NF1P21359 2839 aa7.07□□□□□ -1.28
SMC6-204ENST00000428868 PIGBOS1A0A0B4J2F0 54 aa7.07□□□□□ -1.28
SMC6-204ENST00000428868 CEBPZOSA8MTT3 80 aa7.07□□□□□ -1.28
SMC6-204ENST00000428868 FAM90A26D6RGX4 464 aa7.07□□□□□ -1.28
SMC6-204ENST00000428868 RRHO14718 337 aa7.07□□□□□ -1.28
SMC6-204ENST00000428868 NBR2O15453 112 aa7.07□□□□□ -1.28
SMC6-204ENST00000428868 TSC22D2O75157 780 aa7.07□□□□□ -1.28
SMC6-204ENST00000428868 SNAPC5O75971 98 aa7.07□□□□□ -1.28
SMC6-204ENST00000428868 NDUFA3O95167 84 aa7.07□□□□□ -1.28
SMC6-204ENST00000428868 IFNA17P01571 189 aa7.07□□□□□ -1.28
SMC6-204ENST00000428868 PET100P0DJ07 73 aa7.07□□□□□ -1.28
SMC6-204ENST00000428868 APELAP0DMC3 54 aa7.07□□□□□ -1.28
SMC6-204ENST00000428868 RPL12P30050 165 aaKnown RBP7.07□□□□□ -1.28
SMC6-204ENST00000428868 P2RY1P47900 373 aa7.07□□□□□ -1.28
SMC6-204ENST00000428868 LGALS7P47929 136 aa7.07□□□□□ -1.28
SMC6-204ENST00000428868 RPL8P62917 257 aaKnown RBP7.07□□□□□ -1.28
SMC6-204ENST00000428868 VAMP2P63027 116 aa7.07□□□□□ -1.28
SMC6-204ENST00000428868 NDPQ00604 133 aa7.07□□□□□ -1.28
SMC6-204ENST00000428868 EWSR1Q01844 656 aaKnown RBP eCLIP7.07□□□□□ -1.28
SMC6-204ENST00000428868 NHLH2Q02577 135 aa7.07□□□□□ -1.28
SMC6-204ENST00000428868 OPCMLQ14982 345 aa7.07□□□□□ -1.28
SMC6-204ENST00000428868 LY6EQ16553 131 aa7.07□□□□□ -1.28
SMC6-204ENST00000428868 PRSS8Q16651 343 aa7.07□□□□□ -1.28
SMC6-204ENST00000428868 DEFB112Q30KQ8 113 aa7.07□□□□□ -1.28
SMC6-204ENST00000428868 ACOT7LQ6ZUV0 252 aa7.07□□□□□ -1.28
SMC6-204ENST00000428868 ZNF429Q86V71 674 aa7.07□□□□□ -1.28
SMC6-204ENST00000428868 KCNRGQ8N5I3 272 aa7.07□□□□□ -1.28
SMC6-204ENST00000428868 OR2C3Q8N628 320 aa7.07□□□□□ -1.28
SMC6-204ENST00000428868 NPBQ8NG41 125 aa7.07□□□□□ -1.28
SMC6-204ENST00000428868 OR2T10Q8NGZ9 312 aa7.07□□□□□ -1.28
SMC6-204ENST00000428868 DTD1Q8TEA8 209 aa7.07□□□□□ -1.28
SMC6-204ENST00000428868 AQP10Q96PS8 301 aa7.07□□□□□ -1.28
SMC6-204ENST00000428868 TSNAXQ99598 290 aaKnown RBP7.07□□□□□ -1.28
SMC6-204ENST00000428868 HINT2Q9BX68 163 aa7.07□□□□□ -1.28
SMC6-204ENST00000428868 ARL6Q9H0F7 186 aa7.07□□□□□ -1.28
SMC6-204ENST00000428868 MEGF9Q9H1U4 602 aa7.07□□□□□ -1.28
SMC6-204ENST00000428868 WFDC1Q9HC57 220 aa7.07□□□□□ -1.28
SMC6-204ENST00000428868 CYTL1Q9NRR1 136 aa7.07□□□□□ -1.28
SMC6-204ENST00000428868 LYRM2Q9NU23 88 aaPredicted RBP7.07□□□□□ -1.28
SMC6-204ENST00000428868 PSENENQ9NZ42 101 aa7.07□□□□□ -1.28
SMC6-204ENST00000428868 SONP18583 2426 aaKnown RBP7.06□□□□□ -1.28
SMC6-204ENST00000428868 C15orf62A8K5M9 175 aa7.06□□□□□ -1.28
SMC6-204ENST00000428868 H3BUX3 64 aa7.06□□□□□ -1.28
SMC6-204ENST00000428868 BCL2L11O43521 198 aa7.06□□□□□ -1.28
SMC6-204ENST00000428868 GPR137BO60478 399 aa7.06□□□□□ -1.28
SMC6-204ENST00000428868 CST7O76096 145 aa7.06□□□□□ -1.28
SMC6-204ENST00000428868 CFDP00746 253 aaPredicted RBP7.06□□□□□ -1.28
SMC6-204ENST00000428868 CA2P00918 260 aa7.06□□□□□ -1.28
SMC6-204ENST00000428868 RLN2P04090 185 aa7.06□□□□□ -1.28
SMC6-204ENST00000428868 REG1AP05451 166 aa7.06□□□□□ -1.28
SMC6-204ENST00000428868 METTL15P1P0C7V9 234 aa7.06□□□□□ -1.28
SMC6-204ENST00000428868 S100A11P31949 105 aa7.06□□□□□ -1.28
SMC6-204ENST00000428868 HOXA1P49639 335 aaPredicted RBP7.06□□□□□ -1.28
SMC6-204ENST00000428868 CAV2P51636 162 aa7.06□□□□□ -1.28
SMC6-204ENST00000428868 ARHGDIBP52566 201 aa7.06□□□□□ -1.28
SMC6-204ENST00000428868 SPCS3P61009 180 aa7.06□□□□□ -1.28
SMC6-204ENST00000428868 HSPE1P61604 102 aaKnown RBP7.06□□□□□ -1.28
SMC6-204ENST00000428868 GNB1P62873 340 aa7.06□□□□□ -1.28
SMC6-204ENST00000428868 PRCDQ00LT1 54 aa7.06□□□□□ -1.28
SMC6-204ENST00000428868 ZNF345Q14585 488 aa7.06□□□□□ -1.28
SMC6-204ENST00000428868 TNXAQ16473 311 aa7.06□□□□□ -1.28
SMC6-204ENST00000428868 PDLIM3Q53GG5 364 aaPredicted RBP7.06□□□□□ -1.28
SMC6-204ENST00000428868 SPANXN5Q5MJ07 72 aa7.06□□□□□ -1.28
SMC6-204ENST00000428868 TMEM252Q8N6L7 170 aa7.06□□□□□ -1.28
SMC6-204ENST00000428868 Q8N9W7 124 aa7.06□□□□□ -1.28
SMC6-204ENST00000428868 TEX45Q8NA69 505 aa7.06□□□□□ -1.28
SMC6-204ENST00000428868 OR52E5Q8NH55 327 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms