RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 LOC100506127A0A0U1RQW1 187 aa11.65□□□□□ -0.54
SEC13-210ENST00000428626 DPPA5A6NC42 116 aa11.65□□□□□ -0.54
SEC13-210ENST00000428626 OR11H12B2RN74 326 aa11.65□□□□□ -0.54
SEC13-210ENST00000428626 SULT1C2O00338 296 aa11.65□□□□□ -0.54
SEC13-210ENST00000428626 TPPPO94811 219 aa11.65□□□□□ -0.54
SEC13-210ENST00000428626 HLA-GP17693 338 aa11.65□□□□□ -0.54
SEC13-210ENST00000428626 CBLN1P23435 193 aa11.65□□□□□ -0.54
SEC13-210ENST00000428626 ARL3P36405 182 aa11.65□□□□□ -0.54
SEC13-210ENST00000428626 TGFBR1P36897 503 aa11.65□□□□□ -0.54
SEC13-210ENST00000428626 OR2B8PP59922 312 aa11.65□□□□□ -0.54
SEC13-210ENST00000428626 ARPC4P59998 168 aa11.65□□□□□ -0.54
SEC13-210ENST00000428626 GUCA2BQ16661 112 aa11.65□□□□□ -0.54
SEC13-210ENST00000428626 UNQ9165/PRO28630Q6UXU0 137 aa11.65□□□□□ -0.54
SEC13-210ENST00000428626 TMEM61Q8N0U2 210 aa11.65□□□□□ -0.54
SEC13-210ENST00000428626 SPAG16Q8N0X2 631 aa11.65□□□□□ -0.54
SEC13-210ENST00000428626 SRD5A3Q9H8P0 318 aa11.65□□□□□ -0.54
SEC13-210ENST00000428626 BET1LQ9NYM9 111 aa11.65□□□□□ -0.54
SEC13-210ENST00000428626 MLXQ9UH92 298 aa11.65□□□□□ -0.54
SEC13-210ENST00000428626 IGLC7A0M8Q6 106 aa11.64□□□□□ -0.55
SEC13-210ENST00000428626 MEIS3P1A6NDR6 274 aa11.64□□□□□ -0.55
SEC13-210ENST00000428626 HRASP01112 189 aa11.64□□□□□ -0.55
SEC13-210ENST00000428626 IFNA6P05013 189 aa11.64□□□□□ -0.55
SEC13-210ENST00000428626 FXYD4P59646 89 aa11.64□□□□□ -0.55
SEC13-210ENST00000428626 MSMO1Q15800 293 aa11.64□□□□□ -0.55
SEC13-210ENST00000428626 ZNF818PQ6ZRF7 136 aa11.64□□□□□ -0.55
SEC13-210ENST00000428626 YTHDF1Q9BYJ9 559 aaKnown RBP11.64□□□□□ -0.55
SEC13-210ENST00000428626 SLC5A7Q9GZV3 580 aa11.64□□□□□ -0.55
SEC13-210ENST00000428626 SLC2A8Q9NY64 477 aa11.64□□□□□ -0.55
SEC13-210ENST00000428626 TECRQ9NZ01 308 aaKnown RBP11.64□□□□□ -0.55
SEC13-210ENST00000428626 ETV7Q9Y603 341 aa11.64□□□□□ -0.55
SEC13-210ENST00000428626 A8MWP6 167 aa11.63□□□□□ -0.55
SEC13-210ENST00000428626 UPK2O00526 184 aa11.63□□□□□ -0.55
SEC13-210ENST00000428626 RBFOX2O43251 390 aaKnown RBP eCLIP11.63□□□□□ -0.55
SEC13-210ENST00000428626 SCAND1P57086 179 aa11.63□□□□□ -0.55
SEC13-210ENST00000428626 NEDD8Q15843 81 aa11.63□□□□□ -0.55
SEC13-210ENST00000428626 POU2AF1Q16633 256 aa11.63□□□□□ -0.55
SEC13-210ENST00000428626 TM4SF20Q53R12 229 aa11.63□□□□□ -0.55
SEC13-210ENST00000428626 FAM209BQ5JX69 171 aa11.63□□□□□ -0.55
SEC13-210ENST00000428626 UXS1Q8NBZ7 420 aa11.63□□□□□ -0.55
SEC13-210ENST00000428626 HRASLSQ9HDD0 168 aa11.63□□□□□ -0.55
SEC13-210ENST00000428626 ALMS1Q8TCU4 4167 aa11.62□□□□□ -0.55
SEC13-210ENST00000428626 IGHV3-35A0A0C4DH35 117 aa11.62□□□□□ -0.55
SEC13-210ENST00000428626 ZNF320A2RRD8 509 aa11.62□□□□□ -0.55
SEC13-210ENST00000428626 S1PR2O95136 353 aa11.62□□□□□ -0.55
SEC13-210ENST00000428626 CLEC3BP05452 202 aa11.62□□□□□ -0.55
SEC13-210ENST00000428626 RPA2P15927 270 aa11.62□□□□□ -0.55
SEC13-210ENST00000428626 TMEM17Q86X19 198 aa11.62□□□□□ -0.55
SEC13-210ENST00000428626 ZBTB34Q8NCN2 500 aa11.62□□□□□ -0.55
SEC13-210ENST00000428626 OR10W1Q8NGF6 305 aa11.62□□□□□ -0.55
SEC13-210ENST00000428626 OR51H1Q8NH63 302 aa11.62□□□□□ -0.55
SEC13-210ENST00000428626 OR4A5Q8NH83 315 aa11.62□□□□□ -0.55
SEC13-210ENST00000428626 ZNF502Q8TBZ5 544 aa11.62□□□□□ -0.55
SEC13-210ENST00000428626 GIMAP1Q8WWP7 306 aa11.62□□□□□ -0.55
SEC13-210ENST00000428626 EEF1AKMT3Q96AZ1 226 aa11.62□□□□□ -0.55
SEC13-210ENST00000428626 A0A0A6YYH2 397 aa11.61□□□□□ -0.55
SEC13-210ENST00000428626 A6NJ64 397 aa11.61□□□□□ -0.55
SEC13-210ENST00000428626 SCAF4O95104 1147 aaKnown RBP11.61□□□□□ -0.55
SEC13-210ENST00000428626 HPRT1P00492 218 aa11.61□□□□□ -0.55
SEC13-210ENST00000428626 GNRHRP30968 328 aa11.61□□□□□ -0.55
SEC13-210ENST00000428626 GPR183P32249 361 aa11.61□□□□□ -0.55
SEC13-210ENST00000428626 TAS2R31P59538 309 aa11.61□□□□□ -0.55
SEC13-210ENST00000428626 ZNF57Q68EA5 555 aaPredicted RBP11.61□□□□□ -0.55
SEC13-210ENST00000428626 BTNL8Q6UX41 500 aa11.61□□□□□ -0.55
SEC13-210ENST00000428626 OR5AP2Q8NGF4 316 aa11.61□□□□□ -0.55
SEC13-210ENST00000428626 TMEM140Q9NV12 185 aa11.61□□□□□ -0.55
SEC13-210ENST00000428626 DHFRP00374 187 aa11.6□□□□□ -0.55
SEC13-210ENST00000428626 C8orf88P0DMB2 117 aa11.6□□□□□ -0.55
SEC13-210ENST00000428626 DEFA4P12838 97 aa11.6□□□□□ -0.55
SEC13-210ENST00000428626 NQO2P16083 231 aa11.6□□□□□ -0.55
SEC13-210ENST00000428626 HIST1H1BP16401 226 aaKnown RBP11.6□□□□□ -0.55
SEC13-210ENST00000428626 RFX2P48378 723 aa11.6□□□□□ -0.55
SEC13-210ENST00000428626 MFAP2P55001 183 aa11.6□□□□□ -0.55
SEC13-210ENST00000428626 WT1-ASQ06250 92 aa11.6□□□□□ -0.55
SEC13-210ENST00000428626 FAM106AQ4KMX7 169 aa11.6□□□□□ -0.55
SEC13-210ENST00000428626 ANAPC10Q9UM13 185 aa11.6□□□□□ -0.55
SEC13-210ENST00000428626 TRBV7-1A0A0A6YYK4 115 aa11.59□□□□□ -0.55
SEC13-210ENST00000428626 CATR1Q13166 79 aa11.59□□□□□ -0.55
SEC13-210ENST00000428626 AADACL3Q5VUY0 350 aa11.59□□□□□ -0.55
SEC13-210ENST00000428626 ZNF414Q96IQ9 312 aa11.59□□□□□ -0.55
SEC13-210ENST00000428626 Q9H521 79 aa11.59□□□□□ -0.55
SEC13-210ENST00000428626 PLEKHA2Q9HB19 425 aa11.59□□□□□ -0.55
SEC13-210ENST00000428626 DIABLOQ9NR28 239 aa11.59□□□□□ -0.55
SEC13-210ENST00000428626 TEX50A0A1B0GTY4 177 aa11.58□□□□□ -0.56
SEC13-210ENST00000428626 F8W735 103 aaPredicted RBP11.58□□□□□ -0.56
SEC13-210ENST00000428626 XRCC3O43542 346 aa11.58□□□□□ -0.56
SEC13-210ENST00000428626 PTBP1P26599 531 aaKnown RBP eCLIP11.58□□□□□ -0.562e-7■■■■■ 31.3
SEC13-210ENST00000428626 ZNF585BQ52M93 769 aa11.58□□□□□ -0.56
SEC13-210ENST00000428626 DHRS11Q6UWP2 260 aa11.58□□□□□ -0.56
SEC13-210ENST00000428626 OR52B4Q8NGK2 314 aa11.58□□□□□ -0.56
SEC13-210ENST00000428626 CXorf58Q96LI9 332 aa11.58□□□□□ -0.56
SEC13-210ENST00000428626 QTRT1Q9BXR0 403 aaKnown RBP11.58□□□□□ -0.56
SEC13-210ENST00000428626 ZNF436Q9C0F3 470 aaPredicted RBP11.58□□□□□ -0.56
SEC13-210ENST00000428626 COMMD5Q9GZQ3 224 aa11.58□□□□□ -0.56
SEC13-210ENST00000428626 EHFQ9NZC4 300 aa11.58□□□□□ -0.56
SEC13-210ENST00000428626 NSG2Q9Y328 171 aa11.58□□□□□ -0.56
SEC13-210ENST00000428626 IGHV3-21A0A0B4J1V1 117 aa11.57□□□□□ -0.56
SEC13-210ENST00000428626 PGLYRP1O75594 196 aaPredicted RBP11.57□□□□□ -0.56
SEC13-210ENST00000428626 PMP2P02689 132 aa11.57□□□□□ -0.56
SEC13-210ENST00000428626 RLN1P04808 185 aa11.57□□□□□ -0.56
SEC13-210ENST00000428626 OR13C7P0DN81 318 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms