RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 CXorf65A6NEN9 183 aa12.34□□□□□ -0.43
VARS-216ENST00000428445 TNFSF12O43508 249 aa12.34□□□□□ -0.43
VARS-216ENST00000428445 CLEC3BP05452 202 aa12.34□□□□□ -0.43
VARS-216ENST00000428445 FAM106AQ4KMX7 169 aa12.34□□□□□ -0.43
VARS-216ENST00000428445 ZNF585BQ52M93 769 aa12.34□□□□□ -0.43
VARS-216ENST00000428445 UBE2UQ5VVX9 321 aa12.34□□□□□ -0.43
VARS-216ENST00000428445 OR4A5Q8NH83 315 aa12.34□□□□□ -0.43
VARS-216ENST00000428445 EEF1AKMT3Q96AZ1 226 aa12.34□□□□□ -0.43
VARS-216ENST00000428445 CNBD2Q96M20 576 aa12.34□□□□□ -0.43
VARS-216ENST00000428445 UBQLN2Q9UHD9 624 aa12.34□□□□□ -0.43
VARS-216ENST00000428445 DNAH10Q8IVF4 4471 aa12.34□□□□□ -0.43
VARS-216ENST00000428445 TRAV3A0A0B4J244 114 aa12.33□□□□□ -0.44
VARS-216ENST00000428445 TMEM235A6NFC5 223 aa12.33□□□□□ -0.44
VARS-216ENST00000428445 SSX5O60225 188 aa12.33□□□□□ -0.44
VARS-216ENST00000428445 FGF2P09038 288 aa12.33□□□□□ -0.44
VARS-216ENST00000428445 CTRB1P17538 263 aa12.33□□□□□ -0.44
VARS-216ENST00000428445 GNG2P59768 71 aa12.33□□□□□ -0.44
VARS-216ENST00000428445 CTRB2Q6GPI1 263 aa12.33□□□□□ -0.44
VARS-216ENST00000428445 IZUMO2Q6UXV1 221 aa12.33□□□□□ -0.44
VARS-216ENST00000428445 FCGR1BQ92637 280 aa12.33□□□□□ -0.44
VARS-216ENST00000428445 YTHDF1Q9BYJ9 559 aaKnown RBP12.33□□□□□ -0.44
VARS-216ENST00000428445 TXNL4BQ9NX01 149 aaKnown RBP12.33□□□□□ -0.44
VARS-216ENST00000428445 TRBV7-1A0A0A6YYK4 115 aa12.32□□□□□ -0.44
VARS-216ENST00000428445 TMEM127O75204 238 aa12.32□□□□□ -0.44
VARS-216ENST00000428445 FCER2P06734 321 aa12.32□□□□□ -0.44
VARS-216ENST00000428445 ANKRD55Q3KP44 614 aa12.32□□□□□ -0.44
VARS-216ENST00000428445 OR4A47Q6IF82 309 aa12.32□□□□□ -0.44
VARS-216ENST00000428445 CXorf58Q96LI9 332 aa12.32□□□□□ -0.44
VARS-216ENST00000428445 CCL28Q9NRJ3 127 aa12.32□□□□□ -0.44
VARS-216ENST00000428445 BET1LQ9NYM9 111 aa12.32□□□□□ -0.44
VARS-216ENST00000428445 SSR3Q9UNL2 185 aa12.32□□□□□ -0.44
VARS-216ENST00000428445 IGLV11-55A0A075B6I3 123 aa12.31□□□□□ -0.44
VARS-216ENST00000428445 A0A0A6YYH2 397 aa12.31□□□□□ -0.44
VARS-216ENST00000428445 A6NJ64 397 aa12.31□□□□□ -0.44
VARS-216ENST00000428445 RBFOX2O43251 390 aaKnown RBP eCLIP12.31□□□□□ -0.44
VARS-216ENST00000428445 DEFA4P12838 97 aa12.31□□□□□ -0.44
VARS-216ENST00000428445 RPA2P15927 270 aa12.31□□□□□ -0.44
VARS-216ENST00000428445 GPR183P32249 361 aa12.31□□□□□ -0.44
VARS-216ENST00000428445 RPL8P62917 257 aaKnown RBP12.31□□□□□ -0.44
VARS-216ENST00000428445 SRSF8Q9BRL6 282 aaKnown RBP12.31□□□□□ -0.44
VARS-216ENST00000428445 A8MWP6 167 aa12.3□□□□□ -0.44
VARS-216ENST00000428445 HLA-GP17693 338 aa12.3□□□□□ -0.44
VARS-216ENST00000428445 DEFB135Q30KP9 77 aa12.3□□□□□ -0.44
VARS-216ENST00000428445 ZNF773Q6PK81 442 aa12.3□□□□□ -0.44
VARS-216ENST00000428445 RBPMS2Q6ZRY4 209 aaKnown RBP12.3□□□□□ -0.44
VARS-216ENST00000428445 LYG2Q86SG7 212 aa12.3□□□□□ -0.44
VARS-216ENST00000428445 SPARTQ8N0X7 666 aa12.3□□□□□ -0.44
VARS-216ENST00000428445 RPP25LQ8N5L8 163 aaKnown RBP12.3□□□□□ -0.44
VARS-216ENST00000428445 SECTM1Q8WVN6 248 aa12.3□□□□□ -0.44
VARS-216ENST00000428445 MARC2Q969Z3 335 aa12.3□□□□□ -0.44
VARS-216ENST00000428445 HRASLSQ9HDD0 168 aa12.3□□□□□ -0.44
VARS-216ENST00000428445 THYN1Q9P016 225 aa12.3□□□□□ -0.44
VARS-216ENST00000428445 DAPK2Q9UIK4 370 aa12.3□□□□□ -0.44
VARS-216ENST00000428445 IGHV3OR16-8A0A075B7F1 116 aa12.29□□□□□ -0.44
VARS-216ENST00000428445 IGHV3-21A0A0B4J1V1 117 aa12.29□□□□□ -0.44
VARS-216ENST00000428445 TRAV25A0A0B4J276 109 aa12.29□□□□□ -0.44
VARS-216ENST00000428445 C8orf88P0DMB2 117 aa12.29□□□□□ -0.44
VARS-216ENST00000428445 TAS2R31P59538 309 aa12.29□□□□□ -0.44
VARS-216ENST00000428445 OR2B8PP59922 312 aa12.29□□□□□ -0.44
VARS-216ENST00000428445 ARPC4P59998 168 aa12.29□□□□□ -0.44
VARS-216ENST00000428445 SFXN4Q6P4A7 337 aa12.29□□□□□ -0.44
VARS-216ENST00000428445 GVQW1Q8N7I0 195 aa12.29□□□□□ -0.44
VARS-216ENST00000428445 BEST4Q8NFU0 473 aa12.29□□□□□ -0.44
VARS-216ENST00000428445 OR10W1Q8NGF6 305 aa12.29□□□□□ -0.44
VARS-216ENST00000428445 OR1L6Q8NGR2 347 aa12.29□□□□□ -0.44
VARS-216ENST00000428445 CD300LFQ8TDQ1 290 aa12.29□□□□□ -0.44
VARS-216ENST00000428445 BORCS5Q969J3 196 aa12.29□□□□□ -0.44
VARS-216ENST00000428445 RHBDL2Q9NX52 303 aa12.29□□□□□ -0.44
VARS-216ENST00000428445 RRP15Q9Y3B9 282 aaKnown RBP12.29□□□□□ -0.44
VARS-216ENST00000428445 ETV7Q9Y603 341 aa12.29□□□□□ -0.44
VARS-216ENST00000428445 SULT1C2O00338 296 aa12.28□□□□□ -0.44
VARS-216ENST00000428445 CYB5BO43169 146 aa12.28□□□□□ -0.44
VARS-216ENST00000428445 SPRY2O43597 315 aa12.28□□□□□ -0.44
VARS-216ENST00000428445 S1PR2O95136 353 aa12.28□□□□□ -0.44
VARS-216ENST00000428445 HPRT1P00492 218 aa12.28□□□□□ -0.44
VARS-216ENST00000428445 RPL35AP18077 110 aaKnown RBP12.28□□□□□ -0.44
VARS-216ENST00000428445 FCGR2CP31995 323 aa12.28□□□□□ -0.44
VARS-216ENST00000428445 ELLP55199 621 aaPredicted RBP12.28□□□□□ -0.44
VARS-216ENST00000428445 POU2AF1Q16633 256 aa12.28□□□□□ -0.44
VARS-216ENST00000428445 TIMM50Q3ZCQ8 353 aa12.28□□□□□ -0.44
VARS-216ENST00000428445 CEMP1Q6PRD7 247 aaPredicted RBP12.28□□□□□ -0.44
VARS-216ENST00000428445 PLET1Q6UQ28 207 aa12.28□□□□□ -0.44
VARS-216ENST00000428445 HOGA1Q86XE5 327 aa12.28□□□□□ -0.44
VARS-216ENST00000428445 SPAG16Q8N0X2 631 aa12.28□□□□□ -0.44
VARS-216ENST00000428445 OR2C3Q8N628 320 aa12.28□□□□□ -0.44
VARS-216ENST00000428445 ZNF502Q8TBZ5 544 aa12.28□□□□□ -0.44
VARS-216ENST00000428445 GIMAP1Q8WWP7 306 aa12.28□□□□□ -0.44
VARS-216ENST00000428445 IGLC7A0M8Q6 106 aa12.27□□□□□ -0.45
VARS-216ENST00000428445 ZNF207O43670 478 aaKnown RBP12.27□□□□□ -0.45
VARS-216ENST00000428445 NQO2P16083 231 aa12.27□□□□□ -0.45
VARS-216ENST00000428445 PSMB9P28065 219 aa12.27□□□□□ -0.45
VARS-216ENST00000428445 CBX5P45973 191 aa12.27□□□□□ -0.45
VARS-216ENST00000428445 CATR1Q13166 79 aa12.27□□□□□ -0.45
VARS-216ENST00000428445 THOC7Q6I9Y2 204 aaKnown RBP12.27□□□□□ -0.45
VARS-216ENST00000428445 HSD17B13Q7Z5P4 300 aaPredicted RBP12.27□□□□□ -0.45
VARS-216ENST00000428445 CADM3Q8N126 398 aa12.27□□□□□ -0.45
VARS-216ENST00000428445 ATP6V0BQ99437 205 aa12.27□□□□□ -0.45
VARS-216ENST00000428445 DIABLOQ9NR28 239 aa12.27□□□□□ -0.45
VARS-216ENST00000428445 MRPL27Q9P0M9 148 aaKnown RBP12.27□□□□□ -0.45
VARS-216ENST00000428445 OR2T8A6NH00 312 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms