RNA–Protein interactions for RNA: ENST00000428413.5

SCAP-206, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 3,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-206ENST00000428413 TCF23Q7RTU1 214 aa12.59□□□□□ -0.39
SCAP-206ENST00000428413 MRGPRGQ86SM5 289 aa12.59□□□□□ -0.39
SCAP-206ENST00000428413 RNASE8Q8TDE3 154 aaKnown RBP12.59□□□□□ -0.39
SCAP-206ENST00000428413 ZDHHC11Q9H8X9 412 aa12.59□□□□□ -0.39
SCAP-206ENST00000428413 USP9YO00507 2555 aaPredicted RBP12.59□□□□□ -0.39
SCAP-206ENST00000428413 IFNL4K9M1U5 179 aa12.58□□□□□ -0.4
SCAP-206ENST00000428413 RRHO14718 337 aa12.58□□□□□ -0.4
SCAP-206ENST00000428413 LYL1P12980 280 aa12.58□□□□□ -0.4
SCAP-206ENST00000428413 PSG5Q15238 335 aa12.58□□□□□ -0.4
SCAP-206ENST00000428413 ZNF645Q8N7E2 425 aa12.58□□□□□ -0.4
SCAP-206ENST00000428413 OR4C5Q8NGB2 326 aa12.58□□□□□ -0.4
SCAP-206ENST00000428413 SPSB4Q96A44 273 aa12.58□□□□□ -0.4
SCAP-206ENST00000428413 TRGV8A0A0C4DH27 118 aa12.58□□□□□ -0.4
SCAP-206ENST00000428413 OR9G9P0C7N8 305 aa12.58□□□□□ -0.4
SCAP-206ENST00000428413 COL5A1-AS1Q5SY13 56 aa12.58□□□□□ -0.4
SCAP-206ENST00000428413 TOMM20LQ6UXN7 152 aa12.58□□□□□ -0.4
SCAP-206ENST00000428413 ACP7Q6ZNF0 438 aa12.58□□□□□ -0.4
SCAP-206ENST00000428413 Q6ZT83 130 aa12.58□□□□□ -0.4
SCAP-206ENST00000428413 MOB1BQ7L9L4 216 aa12.58□□□□□ -0.4
SCAP-206ENST00000428413 SGMS2Q8NHU3 365 aa12.58□□□□□ -0.4
SCAP-206ENST00000428413 COMMD5Q9GZQ3 224 aa12.58□□□□□ -0.4
SCAP-206ENST00000428413 IGKV1D-33P01593 117 aa12.58□□□□□ -0.4
SCAP-206ENST00000428413 IGKV1-33P01594 117 aa12.58□□□□□ -0.4
SCAP-206ENST00000428413 Q6P435 159 aa12.58□□□□□ -0.4
SCAP-206ENST00000428413 INO80CQ6PI98 192 aaPredicted RBP12.58□□□□□ -0.4
SCAP-206ENST00000428413 Q6ZR03 302 aa12.58□□□□□ -0.4
SCAP-206ENST00000428413 TRAPPC1Q9Y5R8 145 aa12.58□□□□□ -0.4
SCAP-206ENST00000428413 MYO18BQ8IUG5 2567 aa12.57□□□□□ -0.4
SCAP-206ENST00000428413 IGKV3D-15A0A087WSY6 115 aa12.57□□□□□ -0.4
SCAP-206ENST00000428413 LOC102723971A0A1B0GUV8 181 aa12.57□□□□□ -0.4
SCAP-206ENST00000428413 ORM2P19652 201 aa12.57□□□□□ -0.4
SCAP-206ENST00000428413 KIR2DL2P43627 348 aaPredicted RBP12.57□□□□□ -0.4
SCAP-206ENST00000428413 Q5PR19 223 aa12.57□□□□□ -0.4
SCAP-206ENST00000428413 HCP5Q6MZN7 132 aa12.57□□□□□ -0.4
SCAP-206ENST00000428413 MRPL54Q6P161 138 aaKnown RBP12.57□□□□□ -0.4
SCAP-206ENST00000428413 ZNF497Q6ZNH5 498 aa12.57□□□□□ -0.4
SCAP-206ENST00000428413 COLCA1Q6ZS62 124 aa12.57□□□□□ -0.4
SCAP-206ENST00000428413 TMEM183AQ8IXX5 376 aa12.57□□□□□ -0.4
SCAP-206ENST00000428413 OR10A7Q8NGE5 316 aa12.57□□□□□ -0.4
SCAP-206ENST00000428413 OR1P1Q8NH06 330 aa12.57□□□□□ -0.4
SCAP-206ENST00000428413 NEIL1Q96FI4 390 aaPredicted RBP12.57□□□□□ -0.4
SCAP-206ENST00000428413 TAAR6Q96RI8 345 aa12.57□□□□□ -0.4
SCAP-206ENST00000428413 LYNX1G3V0Z9 82 aa12.57□□□□□ -0.4
SCAP-206ENST00000428413 C1QTNF9P0C862 333 aa12.57□□□□□ -0.4
SCAP-206ENST00000428413 ARL14EPLP0DKL9 152 aa12.57□□□□□ -0.4
SCAP-206ENST00000428413 LYNX1P0DP58 116 aa12.57□□□□□ -0.4
SCAP-206ENST00000428413 KCNIP4Q6PIL6 250 aa12.57□□□□□ -0.4
SCAP-206ENST00000428413 LRTM2Q8N967 370 aa12.57□□□□□ -0.4
SCAP-206ENST00000428413 COQ2Q96H96 371 aa12.57□□□□□ -0.4
SCAP-206ENST00000428413 FAM157AC9JC47 383 aa12.57□□□□□ -0.4
SCAP-206ENST00000428413 CCL3L1P16619 93 aa12.57□□□□□ -0.4
SCAP-206ENST00000428413 GAGE1Q13065 139 aa12.57□□□□□ -0.4
SCAP-206ENST00000428413 UHRF2Q96PU4 802 aa12.57□□□□□ -0.4
SCAP-206ENST00000428413 PKIBQ9C010 78 aa12.57□□□□□ -0.4
SCAP-206ENST00000428413 LPAR2Q9HBW0 351 aa12.57□□□□□ -0.4
SCAP-206ENST00000428413 TMEM140Q9NV12 185 aa12.57□□□□□ -0.4
SCAP-206ENST00000428413 PAM16Q9Y3D7 125 aa12.57□□□□□ -0.4
SCAP-206ENST00000428413 ARHGAP32A7KAX9 2087 aa12.56□□□□□ -0.4
SCAP-206ENST00000428413 RAB7AP51149 207 aa12.56□□□□□ -0.4
SCAP-206ENST00000428413 SUMO1P63165 101 aaKnown RBP12.56□□□□□ -0.4
SCAP-206ENST00000428413 OR2T10Q8NGZ9 312 aa12.56□□□□□ -0.4
SCAP-206ENST00000428413 PXMP4Q9Y6I8 212 aa12.56□□□□□ -0.4
SCAP-206ENST00000428413 CIDEAO60543 219 aa12.56□□□□□ -0.4
SCAP-206ENST00000428413 ACSF3Q4G176 576 aaPredicted RBP12.56□□□□□ -0.4
SCAP-206ENST00000428413 HAPLN4Q86UW8 402 aa12.56□□□□□ -0.4
SCAP-206ENST00000428413 RBMXL3Q8N7X1 1067 aaKnown RBP12.56□□□□□ -0.4
SCAP-206ENST00000428413 TBX15Q96SF7 602 aa12.56□□□□□ -0.4
SCAP-206ENST00000428413 S4R3C0 116 aa12.56□□□□□ -0.4
SCAP-206ENST00000428413 MYO9AB2RTY4 2548 aa12.56□□□□□ -0.4
SCAP-206ENST00000428413 IGHV2OR16-5A0A0B4J2B6 119 aa12.55□□□□□ -0.4
SCAP-206ENST00000428413 CHRNB4P30926 498 aa12.55□□□□□ -0.4
SCAP-206ENST00000428413 ZNF726P1Q15940 193 aa12.55□□□□□ -0.4
SCAP-206ENST00000428413 UTF1Q5T230 341 aa12.55□□□□□ -0.4
SCAP-206ENST00000428413 ASCL4Q6XD76 172 aa12.55□□□□□ -0.4
SCAP-206ENST00000428413 NAT8Q9UHE5 227 aa12.55□□□□□ -0.4
SCAP-206ENST00000428413 TRAV34A0A0B4J273 112 aa12.55□□□□□ -0.4
SCAP-206ENST00000428413 FAM90A27PA6NNH2 459 aa12.55□□□□□ -0.4
SCAP-206ENST00000428413 OPRK1P41145 380 aa12.55□□□□□ -0.4
SCAP-206ENST00000428413 HES1Q14469 280 aa12.55□□□□□ -0.4
SCAP-206ENST00000428413 LRRC75BQ2VPJ9 315 aa12.55□□□□□ -0.4
SCAP-206ENST00000428413 PEAR1Q5VY43 1037 aaPredicted RBP12.55□□□□□ -0.4
SCAP-206ENST00000428413 CD177Q8N6Q3 437 aa12.55□□□□□ -0.4
SCAP-206ENST00000428413 CIB3Q96Q77 187 aaPredicted RBP12.55□□□□□ -0.4
SCAP-206ENST00000428413 SLC35D1Q9NTN3 355 aa12.55□□□□□ -0.4
SCAP-206ENST00000428413 PMCHP20382 165 aa12.55□□□□□ -0.4
SCAP-206ENST00000428413 P2RY6Q15077 328 aa12.55□□□□□ -0.4
SCAP-206ENST00000428413 TEX38Q6PEX7 206 aa12.55□□□□□ -0.4
SCAP-206ENST00000428413 GFRALQ6UXV0 394 aa12.55□□□□□ -0.4
SCAP-206ENST00000428413 IGFBPL1Q8WX77 278 aa12.55□□□□□ -0.4
SCAP-206ENST00000428413 NPCDR1Q9BY65 106 aa12.55□□□□□ -0.4
SCAP-206ENST00000428413 NCKAP5O14513 1909 aa12.55□□□□□ -0.4
SCAP-206ENST00000428413 CTXND1A0A1B0GTU2 59 aa12.54□□□□□ -0.4
SCAP-206ENST00000428413 CAMPP49913 170 aa12.54□□□□□ -0.4
SCAP-206ENST00000428413 SPATA31B1PQ5VZV4 182 aa12.54□□□□□ -0.4
SCAP-206ENST00000428413 MS4A10Q96PG2 267 aa12.54□□□□□ -0.4
SCAP-206ENST00000428413 TXN2Q99757 166 aa12.54□□□□□ -0.4
SCAP-206ENST00000428413 FAM90A10PA6NDY2 464 aa12.54□□□□□ -0.4
SCAP-206ENST00000428413 FAM90A18PA6NE21 464 aa12.54□□□□□ -0.4
SCAP-206ENST00000428413 FAM90A16PA6NEW6 464 aa12.54□□□□□ -0.4
SCAP-206ENST00000428413 FAM90A20PA6NIJ5 464 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms