RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 OR2AE1Q8NHA4 323 aa4.28□□□□□ -1.72
RIF1-203ENST00000428287 PIFOQ8TCI5 191 aa4.28□□□□□ -1.72
RIF1-203ENST00000428287 SARAFQ96BY9 339 aa4.28□□□□□ -1.72
RIF1-203ENST00000428287 ZNF837Q96EG3 531 aaPredicted RBP4.28□□□□□ -1.72
RIF1-203ENST00000428287 SF3B5Q9BWJ5 86 aaKnown RBP4.28□□□□□ -1.72
RIF1-203ENST00000428287 MTCH1Q9NZJ7 389 aa4.28□□□□□ -1.72
RIF1-203ENST00000428287 TRGV10A0A0A0MS01 117 aa4.28□□□□□ -1.72
RIF1-203ENST00000428287 TRAV24A0A0B4J272 114 aa4.28□□□□□ -1.72
RIF1-203ENST00000428287 UBE2L5PA0A1B0GUS4 154 aa4.28□□□□□ -1.72
RIF1-203ENST00000428287 MDFIC2A0A1B0GVS7 189 aa4.28□□□□□ -1.72
RIF1-203ENST00000428287 ODAMA1E959 279 aa4.28□□□□□ -1.72
RIF1-203ENST00000428287 SP9P0CG40 484 aa4.28□□□□□ -1.72
RIF1-203ENST00000428287 DEFA4P12838 97 aa4.28□□□□□ -1.72
RIF1-203ENST00000428287 RAB30Q15771 203 aa4.28□□□□□ -1.72
RIF1-203ENST00000428287 CR1LQ2VPA4 569 aa4.28□□□□□ -1.72
RIF1-203ENST00000428287 EBLN2Q6P2I7 272 aa4.28□□□□□ -1.72
RIF1-203ENST00000428287 TMPRSS7Q7RTY8 843 aa4.28□□□□□ -1.72
RIF1-203ENST00000428287 MCEMP1Q8IX19 187 aa4.28□□□□□ -1.72
RIF1-203ENST00000428287 ABHD3Q8WU67 409 aa4.28□□□□□ -1.72
RIF1-203ENST00000428287 POM121L2Q96KW2 1035 aa4.28□□□□□ -1.72
RIF1-203ENST00000428287 RARRES3Q9UL19 164 aa4.28□□□□□ -1.72
RIF1-203ENST00000428287 CXorf1O96002 111 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 PSG2P11465 335 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 MRPS21P82921 87 aaKnown RBP4.27□□□□□ -1.73
RIF1-203ENST00000428287 VPS25Q9BRG1 176 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 OR2D2Q9H210 308 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 SMIM27A0A1W2PRY6 76 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 IGHV4-34P06331 123 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 PQLC2Q6ZP29 291 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 DRAM1Q8N682 238 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 SLC25A40Q8TBP6 338 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 RELTQ969Z4 430 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 KCNIP1Q9NZI2 227 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 TRAV8-6A0A0B4J262 113 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 ZNF716A6NP11 495 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 M0QZ24 198 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 BMI1P35226 326 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 RAB31Q13636 194 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 HLA-DRB5Q30154 266 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 PRAMEF20Q5VT98 475 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 CLDN23Q96B33 292 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 SPACA9Q96E40 222 aaPredicted RBP4.27□□□□□ -1.73
RIF1-203ENST00000428287 KCNS1Q96KK3 526 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 NUDT22Q9BRQ3 303 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 ZNF430Q9H8G1 570 aaPredicted RBP4.27□□□□□ -1.73
RIF1-203ENST00000428287 PLSCR4Q9NRQ2 329 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 TMEM38BQ9NVV0 291 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 ZIC3O60481 467 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 PROP1O75360 226 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 NUDT3O95989 172 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 ATP5G3P48201 142 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 GFERP55789 205 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 MPV17L2Q567V2 206 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 ZNF497Q6ZNH5 498 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 ZDHHC23Q8IYP9 409 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 FER1L6-AS1Q8NA97 138 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 GATAD1Q8WUU5 269 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 MS4A6AQ9H2W1 248 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 CCDC85CA6NKD9 419 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 VWC2LB2RUY7 222 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 HSBP1O75506 76 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 ZNF718Q3SXZ3 478 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 C16orf47Q6ZP98 133 aaPredicted RBP4.27□□□□□ -1.73
RIF1-203ENST00000428287 C2orf91Q6ZV80 131 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 ZNF439Q8NDP4 499 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.27□□□□□ -1.73
RIF1-203ENST00000428287 PNO1Q9NRX1 252 aaKnown RBP4.27□□□□□ -1.73
RIF1-203ENST00000428287 DEPPQ9NTK1 212 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 IL19Q9UHD0 177 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 A0A1W2PNR3 127 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 DLL1O00548 723 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 HMGB3O15347 200 aaKnown RBP4.27□□□□□ -1.73
RIF1-203ENST00000428287 SMPD2O60906 423 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 ZNF32P17041 273 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 CEACAM21Q3KPI0 293 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 C9orf135Q5VTT2 229 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 FBXO46Q6PJ61 603 aaPredicted RBP4.27□□□□□ -1.73
RIF1-203ENST00000428287 Q6ZVH6 145 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 BHLHA15Q7RTS1 189 aaPredicted RBP4.27□□□□□ -1.73
RIF1-203ENST00000428287 SH2D2AQ9NP31 389 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 OR51B2Q9Y5P1 312 aa4.27□□□□□ -1.73
RIF1-203ENST00000428287 A0A1B0GX78 115 aa4.26□□□□□ -1.73
RIF1-203ENST00000428287 B4DGG1 531 aa4.26□□□□□ -1.73
RIF1-203ENST00000428287 IGLV2-8P01709 118 aa4.26□□□□□ -1.73
RIF1-203ENST00000428287 PPOXP50336 477 aa4.26□□□□□ -1.73
RIF1-203ENST00000428287 KRTDAPP60985 99 aa4.26□□□□□ -1.73
RIF1-203ENST00000428287 ERVK11-1P61568 191 aa4.26□□□□□ -1.73
RIF1-203ENST00000428287 PRR20EP86478 221 aa4.26□□□□□ -1.73
RIF1-203ENST00000428287 PRR20CP86479 221 aa4.26□□□□□ -1.73
RIF1-203ENST00000428287 PRR20DP86480 221 aa4.26□□□□□ -1.73
RIF1-203ENST00000428287 PRR20BP86481 221 aa4.26□□□□□ -1.73
RIF1-203ENST00000428287 PRR20AP86496 221 aa4.26□□□□□ -1.73
RIF1-203ENST00000428287 SLAQ13239 276 aa4.26□□□□□ -1.73
RIF1-203ENST00000428287 OR51H1Q8NH63 302 aa4.26□□□□□ -1.73
RIF1-203ENST00000428287 PRDM6Q9NQX0 595 aa4.26□□□□□ -1.73
RIF1-203ENST00000428287 A0A1W2PRE2 83 aa4.26□□□□□ -1.73
RIF1-203ENST00000428287 SPRY1O43609 319 aaPredicted RBP4.26□□□□□ -1.73
RIF1-203ENST00000428287 TRAPPC6AO75865 159 aa4.26□□□□□ -1.73
RIF1-203ENST00000428287 RBPJQ06330 500 aa4.26□□□□□ -1.73
RIF1-203ENST00000428287 PHYHD1Q5SRE7 291 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms