RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 GABARAPH6UMI1 98 aa11.42□□□□□ -0.58
RTN4-210ENST00000427710 SAP30O75446 220 aa11.42□□□□□ -0.58
RTN4-210ENST00000427710 IGHV3-23P01764 117 aa11.42□□□□□ -0.58
RTN4-210ENST00000427710 IFNA6P05013 189 aa11.42□□□□□ -0.58
RTN4-210ENST00000427710 PPP5CP53041 499 aa11.42□□□□□ -0.58
RTN4-210ENST00000427710 IL18Q14116 193 aa11.42□□□□□ -0.58
RTN4-210ENST00000427710 POU2AF1Q16633 256 aa11.42□□□□□ -0.58
RTN4-210ENST00000427710 TMEM229BQ8NBD8 167 aa11.42□□□□□ -0.58
RTN4-210ENST00000427710 OR4A5Q8NH83 315 aa11.42□□□□□ -0.58
RTN4-210ENST00000427710 CD300LFQ8TDQ1 290 aa11.42□□□□□ -0.58
RTN4-210ENST00000427710 BORCS5Q969J3 196 aa11.42□□□□□ -0.58
RTN4-210ENST00000427710 RANGRFQ9HD47 186 aaPredicted RBP11.42□□□□□ -0.58
RTN4-210ENST00000427710 SLC2A9Q9NRM0 540 aa11.42□□□□□ -0.58
RTN4-210ENST00000427710 COMMD9Q9P000 198 aa11.42□□□□□ -0.58
RTN4-210ENST00000427710 S4R3C0 116 aa11.42□□□□□ -0.58
RTN4-210ENST00000427710 BRI3O95415 125 aa11.41□□□□□ -0.58
RTN4-210ENST00000427710 KRASP01116 189 aa11.41□□□□□ -0.58
RTN4-210ENST00000427710 UCP3P55916 312 aa11.41□□□□□ -0.58
RTN4-210ENST00000427710 OR2B8PP59922 312 aa11.41□□□□□ -0.58
RTN4-210ENST00000427710 ERVK-16P61578 105 aa11.41□□□□□ -0.58
RTN4-210ENST00000427710 ATP5G2Q06055 141 aa11.41□□□□□ -0.58
RTN4-210ENST00000427710 EXOSC2Q13868 293 aaKnown RBP11.41□□□□□ -0.58
RTN4-210ENST00000427710 ZNF343Q6P1L6 599 aa11.41□□□□□ -0.58
RTN4-210ENST00000427710 LHFPL1Q86WI0 220 aa11.41□□□□□ -0.58
RTN4-210ENST00000427710 SLC38A6Q8IZM9 456 aa11.41□□□□□ -0.58
RTN4-210ENST00000427710 OR10W1Q8NGF6 305 aa11.41□□□□□ -0.58
RTN4-210ENST00000427710 MCFD2Q8NI22 146 aa11.41□□□□□ -0.58
RTN4-210ENST00000427710 USMG5Q96IX5 58 aa11.41□□□□□ -0.58
RTN4-210ENST00000427710 AIFM2Q9BRQ8 373 aa11.41□□□□□ -0.58
RTN4-210ENST00000427710 PEF1Q9UBV8 284 aaKnown RBP11.41□□□□□ -0.58
RTN4-210ENST00000427710 ZNF257Q9Y2Q1 563 aa11.41□□□□□ -0.58
RTN4-210ENST00000427710 TRBV9A0A0B4J1U6 114 aa11.4□□□□□ -0.58
RTN4-210ENST00000427710 MARCH11A6NNE9 402 aa11.4□□□□□ -0.58
RTN4-210ENST00000427710 NDUFB8O95169 186 aa11.4□□□□□ -0.58
RTN4-210ENST00000427710 LY86O95711 162 aa11.4□□□□□ -0.58
RTN4-210ENST00000427710 RAB3DO95716 219 aa11.4□□□□□ -0.58
RTN4-210ENST00000427710 IGKV1-39P01597 117 aa11.4□□□□□ -0.58
RTN4-210ENST00000427710 IGKV1D-39P04432 117 aa11.4□□□□□ -0.58
RTN4-210ENST00000427710 PSMB6P28072 239 aa11.4□□□□□ -0.58
RTN4-210ENST00000427710 TAS2R19P59542 299 aa11.4□□□□□ -0.58
RTN4-210ENST00000427710 SCGB2B2Q4G0G5 96 aa11.4□□□□□ -0.58
RTN4-210ENST00000427710 STEAP1BQ6NZ63 245 aa11.4□□□□□ -0.58
RTN4-210ENST00000427710 LPCAT3Q6P1A2 487 aa11.4□□□□□ -0.58
RTN4-210ENST00000427710 ACSM6Q6P461 480 aa11.4□□□□□ -0.58
RTN4-210ENST00000427710 SLC25A42Q86VD7 318 aa11.4□□□□□ -0.58
RTN4-210ENST00000427710 FANCD2OSQ96PS1 177 aa11.4□□□□□ -0.58
RTN4-210ENST00000427710 FBXL7Q9UJT9 491 aa11.4□□□□□ -0.58
RTN4-210ENST00000427710 HUWE1Q7Z6Z7 4374 aaKnown RBP11.39□□□□□ -0.59
RTN4-210ENST00000427710 TEX50A0A1B0GTY4 177 aa11.39□□□□□ -0.59
RTN4-210ENST00000427710 NPIPB5A8MRT5 1133 aa11.39□□□□□ -0.59
RTN4-210ENST00000427710 PPP5D1E7EU14 171 aa11.39□□□□□ -0.59
RTN4-210ENST00000427710 TPPPO94811 219 aa11.39□□□□□ -0.59
RTN4-210ENST00000427710 CD74P04233 296 aa11.39□□□□□ -0.59
RTN4-210ENST00000427710 CTRB1P17538 263 aa11.39□□□□□ -0.59
RTN4-210ENST00000427710 TNFSF8P32971 234 aa11.39□□□□□ -0.59
RTN4-210ENST00000427710 SYNJ2BPP57105 145 aa11.39□□□□□ -0.59
RTN4-210ENST00000427710 C15orf32Q32M92 178 aa11.39□□□□□ -0.59
RTN4-210ENST00000427710 CTRB2Q6GPI1 263 aa11.39□□□□□ -0.59
RTN4-210ENST00000427710 C15orf40Q8WUR7 153 aa11.39□□□□□ -0.59
RTN4-210ENST00000427710 SMIM4Q8WVI0 70 aa11.39□□□□□ -0.59
RTN4-210ENST00000427710 HINT2Q9BX68 163 aa11.39□□□□□ -0.59
RTN4-210ENST00000427710 COMMD5Q9GZQ3 224 aa11.39□□□□□ -0.59
RTN4-210ENST00000427710 NXF2Q9GZY0 626 aaKnown RBP11.39□□□□□ -0.59
RTN4-210ENST00000427710 IGLC7A0M8Q6 106 aa11.38□□□□□ -0.59
RTN4-210ENST00000427710 FAM223BA6NKX1 122 aa11.38□□□□□ -0.59
RTN4-210ENST00000427710 DBX1A6NMT0 343 aa11.38□□□□□ -0.59
RTN4-210ENST00000427710 BMPR1BO00238 502 aa11.38□□□□□ -0.59
RTN4-210ENST00000427710 CRYGCP07315 174 aa11.38□□□□□ -0.59
RTN4-210ENST00000427710 ZP3P21754 424 aa11.38□□□□□ -0.59
RTN4-210ENST00000427710 S100GP29377 79 aa11.38□□□□□ -0.59
RTN4-210ENST00000427710 PIGPP57054 158 aa11.38□□□□□ -0.59
RTN4-210ENST00000427710 KLF5Q13887 457 aaPredicted RBP11.38□□□□□ -0.59
RTN4-210ENST00000427710 IZUMO4Q1ZYL8 232 aa11.38□□□□□ -0.59
RTN4-210ENST00000427710 ZNF429Q86V71 674 aa11.38□□□□□ -0.59
RTN4-210ENST00000427710 FAM223AQ8IWN6 122 aa11.38□□□□□ -0.59
RTN4-210ENST00000427710 OR13C8Q8NGS7 320 aa11.38□□□□□ -0.59
RTN4-210ENST00000427710 MARCH1Q8TCQ1 289 aa11.38□□□□□ -0.59
RTN4-210ENST00000427710 MRGPRFQ96AM1 343 aa11.38□□□□□ -0.59
RTN4-210ENST00000427710 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.37□□□□□ -0.59
RTN4-210ENST00000427710 CTDSPLO15194 276 aa11.37□□□□□ -0.59
RTN4-210ENST00000427710 HLA-AP01891 365 aaKnown RBP11.37□□□□□ -0.59
RTN4-210ENST00000427710 TRAPPC2P0DI81 140 aa11.37□□□□□ -0.59
RTN4-210ENST00000427710 TRAPPC2BP0DI82 140 aa11.37□□□□□ -0.59
RTN4-210ENST00000427710 DEFA4P12838 97 aa11.37□□□□□ -0.59
RTN4-210ENST00000427710 SPNP16150 400 aa11.37□□□□□ -0.59
RTN4-210ENST00000427710 TBPP20226 339 aa11.37□□□□□ -0.59
RTN4-210ENST00000427710 MRPS10P82664 201 aaKnown RBP11.37□□□□□ -0.59
RTN4-210ENST00000427710 RPEL1Q2QD12 228 aa11.37□□□□□ -0.59
RTN4-210ENST00000427710 SP6Q3SY56 376 aa11.37□□□□□ -0.59
RTN4-210ENST00000427710 ARRDC1Q8N5I2 433 aa11.37□□□□□ -0.59
RTN4-210ENST00000427710 NECAP1Q8NC96 275 aa11.37□□□□□ -0.59
RTN4-210ENST00000427710 OR4C16Q8NGL9 310 aa11.37□□□□□ -0.59
RTN4-210ENST00000427710 SEC22AQ96IW7 307 aa11.37□□□□□ -0.59
RTN4-210ENST00000427710 OR4C12Q96R67 309 aa11.37□□□□□ -0.59
RTN4-210ENST00000427710 TP53RKQ96S44 253 aa11.37□□□□□ -0.59
RTN4-210ENST00000427710 SOSTQ9BQB4 213 aa11.37□□□□□ -0.59
RTN4-210ENST00000427710 QTRT1Q9BXR0 403 aaKnown RBP11.37□□□□□ -0.59
RTN4-210ENST00000427710 RBM38Q9H0Z9 239 aaKnown RBP11.37□□□□□ -0.59
RTN4-210ENST00000427710 ZNF256Q9Y2P7 627 aaPredicted RBP11.37□□□□□ -0.59
RTN4-210ENST00000427710 OR51B2Q9Y5P1 312 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms