RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 CRYBA4P53673 196 aa4.88□□□□□ -1.63
HERC4-206ENST00000427635 OR51G1Q8NGK1 321 aa4.88□□□□□ -1.63
HERC4-206ENST00000427635 CHCHD5Q9BSY4 110 aa4.88□□□□□ -1.63
HERC4-206ENST00000427635 KLK15Q9H2R5 256 aa4.88□□□□□ -1.63
HERC4-206ENST00000427635 HS3ST3B1Q9Y662 390 aa4.88□□□□□ -1.63
HERC4-206ENST00000427635 RIF1Q5UIP0 2472 aaKnown RBP4.88□□□□□ -1.63
HERC4-206ENST00000427635 DIRC3C9JPN6 131 aa4.88□□□□□ -1.63
HERC4-206ENST00000427635 IGFBP6P24592 240 aaPredicted RBP4.88□□□□□ -1.63
HERC4-206ENST00000427635 IER3P46695 156 aa4.88□□□□□ -1.63
HERC4-206ENST00000427635 SAXO1Q8IYX7 474 aa4.88□□□□□ -1.63
HERC4-206ENST00000427635 C10orf111Q8N326 155 aa4.88□□□□□ -1.63
HERC4-206ENST00000427635 DUSP21Q9H596 190 aa4.88□□□□□ -1.63
HERC4-206ENST00000427635 EDA2RQ9HAV5 297 aa4.88□□□□□ -1.63
HERC4-206ENST00000427635 CDK5RAP2Q96SN8 1893 aa4.88□□□□□ -1.63
HERC4-206ENST00000427635 BCORQ6W2J9 1755 aa4.88□□□□□ -1.63
HERC4-206ENST00000427635 IGHV3-49A0A0A0MS15 119 aa4.88□□□□□ -1.63
HERC4-206ENST00000427635 B4DEV8 164 aa4.88□□□□□ -1.63
HERC4-206ENST00000427635 TMEM252Q8N6L7 170 aa4.88□□□□□ -1.63
HERC4-206ENST00000427635 FAM110DQ8TAY7 271 aaPredicted RBP4.88□□□□□ -1.63
HERC4-206ENST00000427635 PTH2Q96A98 100 aa4.88□□□□□ -1.63
HERC4-206ENST00000427635 LINC00470Q9BZP3 86 aa4.88□□□□□ -1.63
HERC4-206ENST00000427635 RBKSQ9H477 322 aa4.88□□□□□ -1.63
HERC4-206ENST00000427635 A0A1B0GUL6 1792 aa4.88□□□□□ -1.63
HERC4-206ENST00000427635 TRBV20OR9-2A0A075B6H5 130 aa4.88□□□□□ -1.63
HERC4-206ENST00000427635 M0QXV9 152 aa4.88□□□□□ -1.63
HERC4-206ENST00000427635 AGAP20933 346 aa4.88□□□□□ -1.63
HERC4-206ENST00000427635 EFNA4P52798 201 aa4.88□□□□□ -1.63
HERC4-206ENST00000427635 SIGLEC15Q6ZMC9 328 aa4.88□□□□□ -1.63
HERC4-206ENST00000427635 CST9LQ9H4G1 147 aa4.88□□□□□ -1.63
HERC4-206ENST00000427635 C21orf62Q9NYP8 219 aa4.88□□□□□ -1.63
HERC4-206ENST00000427635 JKAMPQ9P055 326 aa4.88□□□□□ -1.63
HERC4-206ENST00000427635 NEUROG3Q9Y4Z2 214 aa4.88□□□□□ -1.63
HERC4-206ENST00000427635 EPOPA6NHQ4 379 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 GATA4P43694 442 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 RPS11P62280 158 aaKnown RBP eCLIP4.87□□□□□ -1.63
HERC4-206ENST00000427635 TMEM170BQ5T4T1 132 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 SRSF12Q8WXF0 261 aaKnown RBP4.87□□□□□ -1.63
HERC4-206ENST00000427635 C19orf24Q9BVV8 132 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 MTFP1Q9UDX5 166 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 PKD1L3Q7Z443 1732 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 SHANK3Q9BYB0 1731 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 TRAV14DV4A0A0A6YYC5 116 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 TMEM89A2RUT3 159 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 SMIM18P0DKX4 95 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 HKR1P10072 659 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 APOC4P55056 127 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 HSPE1P61604 102 aaKnown RBP4.87□□□□□ -1.63
HERC4-206ENST00000427635 ZNF585BQ52M93 769 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 TMEM86BQ8N661 226 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 GVQW1Q8N7I0 195 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 LRTM2Q8N967 370 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 LEAP2Q969E1 77 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 OR5AC2Q9NZP5 309 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 KCNE5Q9UJ90 142 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 CD7P09564 240 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 OR10J3Q5JRS4 329 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 PEAR1Q5VY43 1037 aaPredicted RBP4.87□□□□□ -1.63
HERC4-206ENST00000427635 TEX38Q6PEX7 206 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 ST6GALNAC3Q8NDV1 305 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 FOXA2Q9Y261 457 aaPredicted RBP4.87□□□□□ -1.63
HERC4-206ENST00000427635 EVPLQ92817 2033 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 FAM90A10PA6NDY2 464 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 FAM90A18PA6NE21 464 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 FAM90A16PA6NEW6 464 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 FAM90A20PA6NIJ5 464 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 FAM90A8PA6NJQ4 464 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 FAM90A7PA6NKC0 464 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 FAM90A22PA8MWA6 464 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 FAM90A12PA8MX19 464 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 FAM90A5PA8MXJ8 464 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 FAM90A23PA8MXZ1 464 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 NPIPB9F8W1W9 429 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 M0R381 172 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 NPIPB7O75200 414 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 APOMO95445 188 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 FAM90A15PP0C7V4 464 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 FAM90A13PP0C7W8 464 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 FAM90A14PP0C7W9 464 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 FAM90A24PP0C7X0 464 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 HOXA5P20719 270 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 EWSR1Q01844 656 aaKnown RBP eCLIP4.87□□□□□ -1.63
HERC4-206ENST00000427635 IBA57Q5T440 356 aaKnown RBP4.87□□□□□ -1.63
HERC4-206ENST00000427635 KLHL30-AS1Q8NEE0 82 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 LYPD6BQ8NI32 183 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 PILRAQ9UKJ1 303 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 TRAV8-7A0A075B6U6 113 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 IGHV3OR16-13A0A075B7E8 117 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 TGIF2-C20orf24A0A0A6YYL0 155 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 IGHV3-74A0A0B4J1X5 117 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 HRKO00198 91 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 RS1O15537 224 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 FOXS1O43638 330 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 ZG16O60844 167 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 ATP5LO75964 103 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 SMIM20Q8N5G0 67 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 TEX45Q8NA69 505 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 Q96MF0 132 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 SRXN1Q9BYN0 137 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 FBXL15Q9H469 300 aa4.87□□□□□ -1.63
HERC4-206ENST00000427635 TRAV26-1A0A087WT03 109 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms