RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 LINC00479Q96M42 142 aa4.31□□□□□ -1.72
C9orf3-205ENST00000427193 PRRT1Q99946 306 aa4.31□□□□□ -1.72
C9orf3-205ENST00000427193 SLC25A21Q9BQT8 299 aaPredicted RBP4.31□□□□□ -1.72
C9orf3-205ENST00000427193 RTBDNQ9BSG5 229 aaPredicted RBP4.31□□□□□ -1.72
C9orf3-205ENST00000427193 FXYD6Q9H0Q3 95 aa4.31□□□□□ -1.72
C9orf3-205ENST00000427193 GAL3ST2Q9H3Q3 398 aa4.31□□□□□ -1.72
C9orf3-205ENST00000427193 C5orf66Q9H5L9 145 aa4.31□□□□□ -1.72
C9orf3-205ENST00000427193 METTL8Q9H825 291 aaKnown RBP4.31□□□□□ -1.72
C9orf3-205ENST00000427193 NECAP2Q9NVZ3 263 aa4.31□□□□□ -1.72
C9orf3-205ENST00000427193 PPP1R14DQ9NXH3 145 aa4.31□□□□□ -1.72
C9orf3-205ENST00000427193 RDH8Q9NYR8 311 aa4.31□□□□□ -1.72
C9orf3-205ENST00000427193 IDI2-AS1Q9NZ38 188 aa4.31□□□□□ -1.72
C9orf3-205ENST00000427193 ZMAT5Q9UDW3 170 aaKnown RBP4.31□□□□□ -1.72
C9orf3-205ENST00000427193 SESN1Q9Y6P5 492 aa4.31□□□□□ -1.72
C9orf3-205ENST00000427193 A0A1W2PPI3 338 aa4.3□□□□□ -1.72
C9orf3-205ENST00000427193 MEX3AA1L020 520 aaKnown RBP4.3□□□□□ -1.72
C9orf3-205ENST00000427193 C7orf66A4D0T2 115 aa4.3□□□□□ -1.72
C9orf3-205ENST00000427193 RNASEK-C17orf49H0YIS7 233 aa4.3□□□□□ -1.72
C9orf3-205ENST00000427193 J3QLI3 93 aa4.3□□□□□ -1.72
C9orf3-205ENST00000427193 VENTXO95231 258 aa4.3□□□□□ -1.72
C9orf3-205ENST00000427193 TCRBP04435 133 aa4.3□□□□□ -1.72
C9orf3-205ENST00000427193 NFYAP23511 347 aaPredicted RBP4.3□□□□□ -1.72
C9orf3-205ENST00000427193 OMGP23515 440 aa4.3□□□□□ -1.72
C9orf3-205ENST00000427193 FCGR2CP31995 323 aa4.3□□□□□ -1.72
C9orf3-205ENST00000427193 PPP1CCP36873 323 aaKnown RBP4.3□□□□□ -1.72
C9orf3-205ENST00000427193 CEACAM6P40199 344 aa4.3□□□□□ -1.72
C9orf3-205ENST00000427193 CCR6P51684 374 aa4.3□□□□□ -1.72
C9orf3-205ENST00000427193 RND3P61587 244 aa4.3□□□□□ -1.72
C9orf3-205ENST00000427193 SUPT4H1P63272 117 aaKnown RBP4.3□□□□□ -1.72
C9orf3-205ENST00000427193 LCN2P80188 198 aa4.3□□□□□ -1.72
C9orf3-205ENST00000427193 MRPS15P82914 257 aaKnown RBP4.3□□□□□ -1.72
C9orf3-205ENST00000427193 SCGB2A2Q13296 93 aa4.3□□□□□ -1.72
C9orf3-205ENST00000427193 ZFP69Q49AA0 526 aa4.3□□□□□ -1.72
C9orf3-205ENST00000427193 KLF17Q5JT82 389 aaPredicted RBP4.3□□□□□ -1.72
C9orf3-205ENST00000427193 PRAMEF5Q5TYX0 476 aa4.3□□□□□ -1.72
C9orf3-205ENST00000427193 FAHD2BQ6P2I3 314 aaPredicted RBP4.3□□□□□ -1.72
C9orf3-205ENST00000427193 IDO2Q6ZQW0 420 aa4.3□□□□□ -1.72
C9orf3-205ENST00000427193 ZNF833PQ6ZTB9 187 aa4.3□□□□□ -1.72
C9orf3-205ENST00000427193 ZDHHC22Q8N966 263 aa4.3□□□□□ -1.72
C9orf3-205ENST00000427193 OR4P4Q8NGL7 312 aa4.3□□□□□ -1.72
C9orf3-205ENST00000427193 OR6F1Q8NGZ6 308 aa4.3□□□□□ -1.72
C9orf3-205ENST00000427193 OR10J5Q8NHC4 309 aa4.3□□□□□ -1.72
C9orf3-205ENST00000427193 UBALD1Q8TB05 177 aa4.3□□□□□ -1.72
C9orf3-205ENST00000427193 TMEM186Q96B77 213 aa4.3□□□□□ -1.72
C9orf3-205ENST00000427193 GALNT14Q96FL9 552 aa4.3□□□□□ -1.72
C9orf3-205ENST00000427193 FAHD2AQ96GK7 314 aa4.3□□□□□ -1.72
C9orf3-205ENST00000427193 ZNF486Q96H40 463 aaPredicted RBP4.3□□□□□ -1.72
C9orf3-205ENST00000427193 TMEM133Q9H2Q1 129 aa4.3□□□□□ -1.72
C9orf3-205ENST00000427193 GHITMQ9H3K2 345 aa4.3□□□□□ -1.72
C9orf3-205ENST00000427193 NARFLQ9H6Q4 476 aa4.3□□□□□ -1.72
C9orf3-205ENST00000427193 CHMP1AQ9HD42 196 aaPredicted RBP4.3□□□□□ -1.72
C9orf3-205ENST00000427193 RAB9BQ9NP90 201 aa4.3□□□□□ -1.72
C9orf3-205ENST00000427193 IFT46Q9NQC8 304 aa4.3□□□□□ -1.72
C9orf3-205ENST00000427193 OR2S2Q9NQN1 319 aa4.3□□□□□ -1.72
C9orf3-205ENST00000427193 EHFQ9NZC4 300 aa4.3□□□□□ -1.72
C9orf3-205ENST00000427193 KCNIP1Q9NZI2 227 aa4.3□□□□□ -1.72
C9orf3-205ENST00000427193 COPZ2Q9P299 210 aa4.3□□□□□ -1.72
C9orf3-205ENST00000427193 PSG11Q9UQ72 335 aa4.3□□□□□ -1.72
C9orf3-205ENST00000427193 VSIG4Q9Y279 399 aa4.3□□□□□ -1.72
C9orf3-205ENST00000427193 RYR1P21817 5038 aa4.29□□□□□ -1.72
C9orf3-205ENST00000427193 IGHV2-26A0A0B4J1V2 119 aa4.29□□□□□ -1.72
C9orf3-205ENST00000427193 CENPVL3A0A0U1RRI6 287 aa4.29□□□□□ -1.72
C9orf3-205ENST00000427193 A0A1W2PPH5 198 aa4.29□□□□□ -1.72
C9orf3-205ENST00000427193 NDUFAF8A1L188 74 aa4.29□□□□□ -1.72
C9orf3-205ENST00000427193 DISC1C4P0D8 188 aa4.29□□□□□ -1.72
C9orf3-205ENST00000427193 J3QR06 171 aa4.29□□□□□ -1.72
C9orf3-205ENST00000427193 BET1O15155 118 aa4.29□□□□□ -1.72
C9orf3-205ENST00000427193 CTSDP07339 412 aaPredicted RBP4.29□□□□□ -1.72
C9orf3-205ENST00000427193 FAUP35544 74 aaKnown RBP4.29□□□□□ -1.72
C9orf3-205ENST00000427193 OR3A3P47888 321 aa4.29□□□□□ -1.72
C9orf3-205ENST00000427193 UBE2E1P51965 193 aa4.29□□□□□ -1.72
C9orf3-205ENST00000427193 DEFA1P59665 94 aa4.29□□□□□ -1.72
C9orf3-205ENST00000427193 DEFA3P59666 94 aa4.29□□□□□ -1.72
C9orf3-205ENST00000427193 ARPC4P59998 168 aa4.29□□□□□ -1.72
C9orf3-205ENST00000427193 UBE2MP61081 183 aaKnown RBP4.29□□□□□ -1.72
C9orf3-205ENST00000427193 ARF6P62330 175 aa4.29□□□□□ -1.72
C9orf3-205ENST00000427193 RGS21Q2M5E4 152 aa4.29□□□□□ -1.72
C9orf3-205ENST00000427193 HLA-DRB5Q30154 266 aa4.29□□□□□ -1.72
C9orf3-205ENST00000427193 ZNF57Q68EA5 555 aaPredicted RBP4.29□□□□□ -1.72
C9orf3-205ENST00000427193 FAM71F2Q6NXP2 309 aa4.29□□□□□ -1.72
C9orf3-205ENST00000427193 ZNF818PQ6ZRF7 136 aa4.29□□□□□ -1.72
C9orf3-205ENST00000427193 SH2D6Q7Z4S9 175 aa4.29□□□□□ -1.72
C9orf3-205ENST00000427193 SLC25A42Q86VD7 318 aa4.29□□□□□ -1.72
C9orf3-205ENST00000427193 DRAM1Q8N682 238 aa4.29□□□□□ -1.72
C9orf3-205ENST00000427193 POC5Q8NA72 575 aa4.29□□□□□ -1.72
C9orf3-205ENST00000427193 MINDY2Q8NBR6 621 aa4.29□□□□□ -1.72
C9orf3-205ENST00000427193 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.29□□□□□ -1.72
C9orf3-205ENST00000427193 OR9G1Q8NH87 305 aa4.29□□□□□ -1.72
C9orf3-205ENST00000427193 IL1F10Q8WWZ1 152 aa4.29□□□□□ -1.72
C9orf3-205ENST00000427193 H1FXQ92522 213 aaKnown RBP4.29□□□□□ -1.72
C9orf3-205ENST00000427193 CREB3L1Q96BA8 519 aa4.29□□□□□ -1.72
C9orf3-205ENST00000427193 AKR1E2Q96JD6 320 aa4.29□□□□□ -1.72
C9orf3-205ENST00000427193 ZNF2Q9BSG1 426 aaPredicted RBP4.29□□□□□ -1.72
C9orf3-205ENST00000427193 PCGF1Q9BSM1 259 aa4.29□□□□□ -1.72
C9orf3-205ENST00000427193 FAM212BQ9NTI7 297 aaPredicted RBP4.29□□□□□ -1.72
C9orf3-205ENST00000427193 SDHAF2Q9NX18 166 aa4.29□□□□□ -1.72
C9orf3-205ENST00000427193 SCP2D1Q9UJQ7 156 aa4.29□□□□□ -1.72
C9orf3-205ENST00000427193 NUBP2Q9Y5Y2 271 aa4.29□□□□□ -1.72
C9orf3-205ENST00000427193 TNCP24821 2201 aa4.29□□□□□ -1.72
C9orf3-205ENST00000427193 RYR2Q92736 4967 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 832.4 ms