RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 FXYD3Q14802 87 aa12.36□□□□□ -0.43
PTPN13-203ENST00000427191 FAM90A1Q86YD7 464 aa12.36□□□□□ -0.43
PTPN13-203ENST00000427191 LINC00469Q8N7U9 141 aa12.36□□□□□ -0.43
PTPN13-203ENST00000427191 LOXL4Q96JB6 756 aa12.36□□□□□ -0.43
PTPN13-203ENST00000427191 KCNK17Q96T54 332 aa12.36□□□□□ -0.43
PTPN13-203ENST00000427191 NHSL1Q5SYE7 1610 aa12.36□□□□□ -0.43
PTPN13-203ENST00000427191 PPIAL4CA0A0B4J2A2 164 aa12.36□□□□□ -0.43
PTPN13-203ENST00000427191 PEX7O00628 323 aa12.36□□□□□ -0.43
PTPN13-203ENST00000427191 PPIAL4GP0DN37 164 aa12.36□□□□□ -0.43
PTPN13-203ENST00000427191 MYF5P13349 255 aa12.36□□□□□ -0.43
PTPN13-203ENST00000427191 TFF2Q03403 129 aa12.36□□□□□ -0.43
PTPN13-203ENST00000427191 SEMA5BQ9P283 1151 aa12.36□□□□□ -0.43
PTPN13-203ENST00000427191 ARID2Q68CP9 1835 aa12.36□□□□□ -0.43
PTPN13-203ENST00000427191 FER1L5A0AVI2 2057 aa12.36□□□□□ -0.43
PTPN13-203ENST00000427191 PGPEP1LA6NFU8 196 aa12.36□□□□□ -0.43
PTPN13-203ENST00000427191 YLPM1P49750 1951 aaKnown RBP12.36□□□□□ -0.43
PTPN13-203ENST00000427191 SPANXDQ9BXN6 97 aa12.35□□□□□ -0.43
PTPN13-203ENST00000427191 NPCDR1Q9BY65 106 aa12.35□□□□□ -0.43
PTPN13-203ENST00000427191 NDUFS8O00217 210 aa12.35□□□□□ -0.43
PTPN13-203ENST00000427191 TUBA4BQ9H853 241 aa12.35□□□□□ -0.43
PTPN13-203ENST00000427191 LOC105371242A0A075B767 164 aa12.35□□□□□ -0.43
PTPN13-203ENST00000427191 TRAV8-2A0A0B4J237 113 aa12.35□□□□□ -0.43
PTPN13-203ENST00000427191 B9A039 149 aa12.35□□□□□ -0.43
PTPN13-203ENST00000427191 LY75O60449 1722 aa12.35□□□□□ -0.43
PTPN13-203ENST00000427191 IZUMO1RA6ND01 250 aa12.35□□□□□ -0.43
PTPN13-203ENST00000427191 ZNF205O95201 554 aa12.35□□□□□ -0.43
PTPN13-203ENST00000427191 ERGP11308 486 aa12.35□□□□□ -0.43
PTPN13-203ENST00000427191 TFPI2P48307 235 aa12.35□□□□□ -0.43
PTPN13-203ENST00000427191 CCL8P80075 99 aa12.35□□□□□ -0.43
PTPN13-203ENST00000427191 POC1AQ8NBT0 407 aa12.35□□□□□ -0.43
PTPN13-203ENST00000427191 ASCL2Q99929 193 aa12.35□□□□□ -0.43
PTPN13-203ENST00000427191 IGKV3D-15A0A087WSY6 115 aa12.35□□□□□ -0.43
PTPN13-203ENST00000427191 IGKV3-15P01624 115 aa12.35□□□□□ -0.43
PTPN13-203ENST00000427191 MYOD1P15172 320 aa12.35□□□□□ -0.43
PTPN13-203ENST00000427191 MALP21145 153 aa12.35□□□□□ -0.43
PTPN13-203ENST00000427191 C1QTNF12Q5T7M4 302 aa12.35□□□□□ -0.43
PTPN13-203ENST00000427191 ZNF324BQ6AW86 544 aaPredicted RBP12.35□□□□□ -0.43
PTPN13-203ENST00000427191 NXT2Q9NPJ8 142 aaKnown RBP12.35□□□□□ -0.43
PTPN13-203ENST00000427191 DLL3Q9NYJ7 618 aa12.35□□□□□ -0.43
PTPN13-203ENST00000427191 IFI27P40305 119 aaPredicted RBP12.35□□□□□ -0.43
PTPN13-203ENST00000427191 PRDM13Q9H4Q3 707 aa12.35□□□□□ -0.43
PTPN13-203ENST00000427191 PDLIM4P50479 330 aa12.35□□□□□ -0.43
PTPN13-203ENST00000427191 TMEM86BQ8N661 226 aa12.35□□□□□ -0.43
PTPN13-203ENST00000427191 IGHV3OR16-12A0A075B7B8 117 aa12.34□□□□□ -0.43
PTPN13-203ENST00000427191 CGB1A6NKQ9 187 aa12.34□□□□□ -0.43
PTPN13-203ENST00000427191 HOXB3P14651 431 aaPredicted RBP12.34□□□□□ -0.43
PTPN13-203ENST00000427191 TMEM187Q14656 261 aa12.34□□□□□ -0.43
PTPN13-203ENST00000427191 ORMDL2Q53FV1 153 aa12.34□□□□□ -0.43
PTPN13-203ENST00000427191 NRN1LQ496H8 165 aa12.34□□□□□ -0.43
PTPN13-203ENST00000427191 SEC11AP67812 179 aa12.34□□□□□ -0.43
PTPN13-203ENST00000427191 CRPP02741 224 aa12.34□□□□□ -0.43
PTPN13-203ENST00000427191 PF4P02776 101 aa12.34□□□□□ -0.43
PTPN13-203ENST00000427191 TMEM92Q6UXU6 159 aa12.34□□□□□ -0.43
PTPN13-203ENST00000427191 ABHD12Q8N2K0 398 aa12.34□□□□□ -0.43
PTPN13-203ENST00000427191 GLI3P10071 1580 aa12.34□□□□□ -0.43
PTPN13-203ENST00000427191 C16orf47Q6ZP98 133 aaPredicted RBP12.34□□□□□ -0.43
PTPN13-203ENST00000427191 A0A1W2PPV9 198 aa12.34□□□□□ -0.43
PTPN13-203ENST00000427191 APOHP02749 345 aaPredicted RBP12.34□□□□□ -0.43
PTPN13-203ENST00000427191 PI4KAP42356 2102 aa12.34□□□□□ -0.43
PTPN13-203ENST00000427191 IGHV1-45A0A0A0MS14 117 aa12.33□□□□□ -0.43
PTPN13-203ENST00000427191 CBLN1P23435 193 aa12.33□□□□□ -0.43
PTPN13-203ENST00000427191 OTX1P32242 354 aaPredicted RBP12.33□□□□□ -0.43
PTPN13-203ENST00000427191 GPR183P32249 361 aa12.33□□□□□ -0.43
PTPN13-203ENST00000427191 OR11H4Q8NGC9 324 aa12.33□□□□□ -0.43
PTPN13-203ENST00000427191 SMPXQ9UHP9 88 aa12.33□□□□□ -0.43
PTPN13-203ENST00000427191 SLC25A15Q9Y619 301 aa12.33□□□□□ -0.43
PTPN13-203ENST00000427191 PMS2CLQ68D20 193 aa12.33□□□□□ -0.44
PTPN13-203ENST00000427191 WDR82Q6UXN9 313 aa12.33□□□□□ -0.44
PTPN13-203ENST00000427191 PSME4Q14997 1843 aa12.33□□□□□ -0.44
PTPN13-203ENST00000427191 FOXI3A8MTJ6 420 aaPredicted RBP12.33□□□□□ -0.44
PTPN13-203ENST00000427191 SIGMAR1Q99720 223 aa12.33□□□□□ -0.44
PTPN13-203ENST00000427191 TMEM106BQ9NUM4 274 aa12.33□□□□□ -0.44
PTPN13-203ENST00000427191 UPK3AO75631 287 aa12.33□□□□□ -0.44
PTPN13-203ENST00000427191 IL9P15248 144 aa12.33□□□□□ -0.44
PTPN13-203ENST00000427191 PAX2Q02962 417 aa12.33□□□□□ -0.44
PTPN13-203ENST00000427191 PRSS53Q2L4Q9 553 aa12.33□□□□□ -0.44
PTPN13-203ENST00000427191 TIMM23BQ5SRD1 257 aa12.33□□□□□ -0.44
PTPN13-203ENST00000427191 IGKV3D-11A0A0A0MRZ8 115 aa12.33□□□□□ -0.44
PTPN13-203ENST00000427191 GGTLC3B5MD39 225 aa12.33□□□□□ -0.44
PTPN13-203ENST00000427191 IGKV3-11P04433 115 aa12.33□□□□□ -0.44
PTPN13-203ENST00000427191 KBTBD11-OT1A0A1B0GTJ5 212 aa12.33□□□□□ -0.44
PTPN13-203ENST00000427191 C1QL1O75973 258 aa12.33□□□□□ -0.44
PTPN13-203ENST00000427191 GZMMP51124 257 aa12.33□□□□□ -0.44
PTPN13-203ENST00000427191 SIGLEC14Q08ET2 396 aa12.33□□□□□ -0.44
PTPN13-203ENST00000427191 ALPK2Q86TB3 2170 aa12.33□□□□□ -0.44
PTPN13-203ENST00000427191 PSMB11A5LHX3 300 aa12.32□□□□□ -0.44
PTPN13-203ENST00000427191 NBEAP1P0C6P0 100 aa12.32□□□□□ -0.44
PTPN13-203ENST00000427191 DMRTA1Q5VZB9 504 aa12.32□□□□□ -0.44
PTPN13-203ENST00000427191 PEMTQ9UBM1 199 aa12.32□□□□□ -0.44
PTPN13-203ENST00000427191 ZNF257Q9Y2Q1 563 aa12.32□□□□□ -0.44
PTPN13-203ENST00000427191 KIAA2026Q5HYC2 2103 aa12.32□□□□□ -0.44
PTPN13-203ENST00000427191 TRAV8-4A0A0B4J246 113 aa12.32□□□□□ -0.44
PTPN13-203ENST00000427191 A0A1W2PPE3 182 aa12.32□□□□□ -0.44
PTPN13-203ENST00000427191 HYAL3O43820 417 aaPredicted RBP12.32□□□□□ -0.44
PTPN13-203ENST00000427191 TMEM95Q3KNT9 176 aa12.32□□□□□ -0.44
PTPN13-203ENST00000427191 LHX8Q68G74 356 aa12.32□□□□□ -0.44
PTPN13-203ENST00000427191 GRIFINA4D1Z8 144 aa12.32□□□□□ -0.44
PTPN13-203ENST00000427191 PLAUP00749 431 aa12.32□□□□□ -0.44
PTPN13-203ENST00000427191 SRSF6Q13247 344 aaKnown RBP12.32□□□□□ -0.44
PTPN13-203ENST00000427191 ITLN1Q8WWA0 313 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms