RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 OR8H1Q8NGG4 311 aa12.14□□□□□ -0.47
GINS3-203ENST00000426538 HINT2Q9BX68 163 aa12.14□□□□□ -0.47
GINS3-203ENST00000426538 TCF19Q9Y242 345 aa12.14□□□□□ -0.47
GINS3-203ENST00000426538 SVEP1Q4LDE5 3571 aa12.14□□□□□ -0.47
GINS3-203ENST00000426538 ACTL6BO94805 426 aa12.13□□□□□ -0.47
GINS3-203ENST00000426538 FAM106CPP0CH98 169 aa12.13□□□□□ -0.47
GINS3-203ENST00000426538 IGHV4-38-2P0DP08 117 aa12.13□□□□□ -0.47
GINS3-203ENST00000426538 CNTFRP26992 372 aa12.13□□□□□ -0.47
GINS3-203ENST00000426538 HOXA1P49639 335 aaPredicted RBP12.13□□□□□ -0.47
GINS3-203ENST00000426538 RPP30P78346 268 aaKnown RBP12.13□□□□□ -0.47
GINS3-203ENST00000426538 PLGLAQ15195 96 aa12.13□□□□□ -0.47
GINS3-203ENST00000426538 MMDQ15546 238 aa12.13□□□□□ -0.47
GINS3-203ENST00000426538 RUSC1-AS1Q66K80 236 aa12.13□□□□□ -0.47
GINS3-203ENST00000426538 CLEC9AQ6UXN8 241 aa12.13□□□□□ -0.47
GINS3-203ENST00000426538 BRD3OSQ6XYD6 125 aa12.13□□□□□ -0.47
GINS3-203ENST00000426538 OR5B3Q8NH48 314 aa12.13□□□□□ -0.47
GINS3-203ENST00000426538 EAF1Q96JC9 268 aaPredicted RBP12.13□□□□□ -0.47
GINS3-203ENST00000426538 HEYLQ9NQ87 328 aaPredicted RBP12.13□□□□□ -0.47
GINS3-203ENST00000426538 KIAA1456Q9P272 454 aa12.13□□□□□ -0.47
GINS3-203ENST00000426538 METTL1Q9UBP6 276 aaKnown RBP12.13□□□□□ -0.47
GINS3-203ENST00000426538 FAM96BQ9Y3D0 163 aa12.13□□□□□ -0.47
GINS3-203ENST00000426538 CSMD1Q96PZ7 3565 aa12.13□□□□□ -0.47
GINS3-203ENST00000426538 TEX50A0A1B0GTY4 177 aa12.12□□□□□ -0.47
GINS3-203ENST00000426538 IGSF23A1L1A6 192 aa12.12□□□□□ -0.47
GINS3-203ENST00000426538 SPDEFO95238 335 aa12.12□□□□□ -0.47
GINS3-203ENST00000426538 OPN1MWP04001 364 aa12.12□□□□□ -0.47
GINS3-203ENST00000426538 OPN1MW2P0DN77 364 aa12.12□□□□□ -0.47
GINS3-203ENST00000426538 OPN1MW3P0DN78 364 aa12.12□□□□□ -0.47
GINS3-203ENST00000426538 BAXQ07812 192 aa12.12□□□□□ -0.47
GINS3-203ENST00000426538 TEX261Q6UWH6 196 aa12.12□□□□□ -0.47
GINS3-203ENST00000426538 PPP1R27Q86WC6 154 aa12.12□□□□□ -0.47
GINS3-203ENST00000426538 MMD2Q8IY49 270 aa12.12□□□□□ -0.47
GINS3-203ENST00000426538 AJUBAQ96IF1 538 aa12.12□□□□□ -0.47
GINS3-203ENST00000426538 SMIM3Q9BZL3 60 aa12.12□□□□□ -0.47
GINS3-203ENST00000426538 ZNF430Q9H8G1 570 aaPredicted RBP12.12□□□□□ -0.47
GINS3-203ENST00000426538 PAIP2BQ9ULR5 123 aaKnown RBP12.12□□□□□ -0.47
GINS3-203ENST00000426538 STRAPQ9Y3F4 350 aaKnown RBP12.12□□□□□ -0.47
GINS3-203ENST00000426538 U3KQ87 197 aa12.12□□□□□ -0.47
GINS3-203ENST00000426538 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.12□□□□□ -0.472e-6■■□□□ 13.9
GINS3-203ENST00000426538 PRRC2AP48634 2157 aaKnown RBP12.11□□□□□ -0.47
GINS3-203ENST00000426538 CST7O76096 145 aa12.11□□□□□ -0.47
GINS3-203ENST00000426538 AVPP01185 164 aa12.11□□□□□ -0.47
GINS3-203ENST00000426538 SULT1A1P50225 295 aa12.11□□□□□ -0.47
GINS3-203ENST00000426538 F2RL1P55085 397 aa12.11□□□□□ -0.47
GINS3-203ENST00000426538 OR1L8Q8NGR8 309 aa12.11□□□□□ -0.47
GINS3-203ENST00000426538 PLEKHA3Q9HB20 300 aa12.11□□□□□ -0.47
GINS3-203ENST00000426538 SIGLEC9Q9Y336 463 aa12.11□□□□□ -0.47
GINS3-203ENST00000426538 UNC79Q9P2D8 2635 aa12.11□□□□□ -0.47
GINS3-203ENST00000426538 RRHO14718 337 aa12.11□□□□□ -0.47
GINS3-203ENST00000426538 NBR2O15453 112 aa12.11□□□□□ -0.47
GINS3-203ENST00000426538 MYOD1P15172 320 aa12.11□□□□□ -0.47
GINS3-203ENST00000426538 TMEM11P17152 192 aa12.11□□□□□ -0.47
GINS3-203ENST00000426538 PRCDQ00LT1 54 aa12.11□□□□□ -0.47
GINS3-203ENST00000426538 TMEM267Q0VDI3 215 aaPredicted RBP12.11□□□□□ -0.47
GINS3-203ENST00000426538 EBI3Q14213 229 aa12.11□□□□□ -0.47
GINS3-203ENST00000426538 THNSL2Q86YJ6 484 aa12.11□□□□□ -0.47
GINS3-203ENST00000426538 TMEM217Q8N7C4 229 aa12.11□□□□□ -0.47
GINS3-203ENST00000426538 FBXL17Q9UF56 701 aa12.11□□□□□ -0.47
GINS3-203ENST00000426538 ITGB1BP2Q9UKP3 347 aa12.11□□□□□ -0.47
GINS3-203ENST00000426538 CR1P17927 2039 aa12.1□□□□□ -0.47
GINS3-203ENST00000426538 NCBP2LA6PVI3 153 aaKnown RBP12.1□□□□□ -0.47
GINS3-203ENST00000426538 JTBO76095 146 aa12.1□□□□□ -0.47
GINS3-203ENST00000426538 IFNA10P01566 189 aa12.1□□□□□ -0.47
GINS3-203ENST00000426538 IFNA7P01567 189 aa12.1□□□□□ -0.47
GINS3-203ENST00000426538 CRYGBP07316 175 aa12.1□□□□□ -0.47
GINS3-203ENST00000426538 METTL15P1P0C7V9 234 aa12.1□□□□□ -0.47
GINS3-203ENST00000426538 MAS1LP35410 378 aa12.1□□□□□ -0.47
GINS3-203ENST00000426538 BPIFB3P59826 476 aa12.1□□□□□ -0.47
GINS3-203ENST00000426538 UBA52P62987 128 aaKnown RBP12.1□□□□□ -0.47
GINS3-203ENST00000426538 EIF5AP63241 154 aaKnown RBP12.1□□□□□ -0.47
GINS3-203ENST00000426538 HBG1P69891 147 aa12.1□□□□□ -0.47
GINS3-203ENST00000426538 HBG2P69892 147 aa12.1□□□□□ -0.47
GINS3-203ENST00000426538 PRSS8Q16651 343 aa12.1□□□□□ -0.47
GINS3-203ENST00000426538 NPBQ8NG41 125 aa12.1□□□□□ -0.47
GINS3-203ENST00000426538 OR5C1Q8NGR4 320 aa12.1□□□□□ -0.47
GINS3-203ENST00000426538 MEGF9Q9H1U4 602 aa12.1□□□□□ -0.47
GINS3-203ENST00000426538 FBXL15Q9H469 300 aa12.1□□□□□ -0.47
GINS3-203ENST00000426538 TPSG1Q9NRR2 321 aa12.1□□□□□ -0.47
GINS3-203ENST00000426538 SMAD7O15105 426 aaKnown RBP12.09□□□□□ -0.47
GINS3-203ENST00000426538 VDAC2P45880 294 aaPredicted RBP12.09□□□□□ -0.47
GINS3-203ENST00000426538 DYNLT3P51808 116 aa12.09□□□□□ -0.47
GINS3-203ENST00000426538 PJVKQ0ZLH3 352 aa12.09□□□□□ -0.47
GINS3-203ENST00000426538 TNXAQ16473 311 aa12.09□□□□□ -0.47
GINS3-203ENST00000426538 KLF17Q5JT82 389 aaPredicted RBP12.09□□□□□ -0.47
GINS3-203ENST00000426538 ZNF680Q8NEM1 530 aa12.09□□□□□ -0.47
GINS3-203ENST00000426538 OR1S2Q8NGQ3 325 aa12.09□□□□□ -0.47
GINS3-203ENST00000426538 ST8SIA2Q92186 375 aa12.09□□□□□ -0.47
GINS3-203ENST00000426538 BSCL2Q96G97 398 aaPredicted RBP12.09□□□□□ -0.47
GINS3-203ENST00000426538 CYTL1Q9NRR1 136 aa12.09□□□□□ -0.47
GINS3-203ENST00000426538 NDUFA4L2Q9NRX3 87 aa12.09□□□□□ -0.47
GINS3-203ENST00000426538 C1RLQ9NZP8 487 aa12.09□□□□□ -0.47
GINS3-203ENST00000426538 PDZD2O15018 2839 aa12.09□□□□□ -0.47
GINS3-203ENST00000426538 TET2Q6N021 2002 aaPredicted RBP12.09□□□□□ -0.47
GINS3-203ENST00000426538 BORCS7-ASMTA0A0B4J1R7 106 aa12.08□□□□□ -0.47
GINS3-203ENST00000426538 A0A0U1RQK1 487 aa12.08□□□□□ -0.47
GINS3-203ENST00000426538 A0A1W2PN81 502 aa12.08□□□□□ -0.47
GINS3-203ENST00000426538 RGS13O14921 159 aa12.08□□□□□ -0.47
GINS3-203ENST00000426538 FBP1P09467 338 aa12.08□□□□□ -0.47
GINS3-203ENST00000426538 TPT1P13693 172 aaKnown RBP12.08□□□□□ -0.47
GINS3-203ENST00000426538 CHRNA7P36544 502 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 153.2 ms