RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 IGKV3D-15A0A087WSY6 115 aa13.43□□□□□ -0.26
PKP4-205ENST00000426248 K7ENP7 123 aa13.43□□□□□ -0.26
PKP4-205ENST00000426248 ZNF718Q3SXZ3 478 aa13.43□□□□□ -0.26
PKP4-205ENST00000426248 INO80CQ6PI98 192 aaPredicted RBP13.43□□□□□ -0.26
PKP4-205ENST00000426248 DERL1Q9BUN8 251 aa13.43□□□□□ -0.26
PKP4-205ENST00000426248 PPP1R3CQ9UQK1 317 aa13.43□□□□□ -0.26
PKP4-205ENST00000426248 SYNGR2O43760 224 aa13.43□□□□□ -0.26
PKP4-205ENST00000426248 SYNGR3O43761 229 aa13.43□□□□□ -0.26
PKP4-205ENST00000426248 CELA3BP08861 270 aa13.43□□□□□ -0.26
PKP4-205ENST00000426248 IGHV1-2P23083 117 aa13.43□□□□□ -0.26
PKP4-205ENST00000426248 HIST3H3Q16695 136 aa13.43□□□□□ -0.26
PKP4-205ENST00000426248 Q6ZT83 130 aa13.43□□□□□ -0.26
PKP4-205ENST00000426248 TRAV30A0A087WSZ9 112 aa13.42□□□□□ -0.26
PKP4-205ENST00000426248 OR2T8A6NH00 312 aa13.42□□□□□ -0.26
PKP4-205ENST00000426248 FBLL1A6NHQ2 334 aaKnown RBP13.42□□□□□ -0.26
PKP4-205ENST00000426248 K7EP13 123 aa13.42□□□□□ -0.26
PKP4-205ENST00000426248 CCL21O00585 134 aa13.42□□□□□ -0.26
PKP4-205ENST00000426248 ZC2HC1AQ96GY0 325 aa13.42□□□□□ -0.26
PKP4-205ENST00000426248 RAB40CQ96S21 281 aa13.42□□□□□ -0.26
PKP4-205ENST00000426248 TMEM250H0YL14 139 aa13.42□□□□□ -0.26
PKP4-205ENST00000426248 FAM27E3Q08E93 113 aa13.42□□□□□ -0.26
PKP4-205ENST00000426248 SLC25A40Q8TBP6 338 aa13.42□□□□□ -0.26
PKP4-205ENST00000426248 C1orf147Q96MC9 270 aaPredicted RBP13.42□□□□□ -0.26
PKP4-205ENST00000426248 MYO9AB2RTY4 2548 aa13.42□□□□□ -0.26
PKP4-205ENST00000426248 FUT6P51993 359 aa13.42□□□□□ -0.26
PKP4-205ENST00000426248 RNASEKQ6P5S7 137 aaKnown RBP13.42□□□□□ -0.26
PKP4-205ENST00000426248 IGF2-ASQ6U949 168 aa13.42□□□□□ -0.26
PKP4-205ENST00000426248 PLPPR1Q8TBJ4 325 aa13.42□□□□□ -0.26
PKP4-205ENST00000426248 PYGO2Q9BRQ0 406 aa13.42□□□□□ -0.26
PKP4-205ENST00000426248 SEPSECSQ9HD40 501 aaKnown RBP13.42□□□□□ -0.26
PKP4-205ENST00000426248 ATP23Q9Y6H3 246 aa13.42□□□□□ -0.26
PKP4-205ENST00000426248 TLN2Q9Y4G6 2542 aa13.42□□□□□ -0.26
PKP4-205ENST00000426248 A0A0U1RQV5 110 aa13.41□□□□□ -0.26
PKP4-205ENST00000426248 SPINK9Q5DT21 86 aa13.41□□□□□ -0.26
PKP4-205ENST00000426248 LHFPL2Q6ZUX7 228 aa13.41□□□□□ -0.26
PKP4-205ENST00000426248 OR8I2Q8N0Y5 310 aa13.41□□□□□ -0.26
PKP4-205ENST00000426248 SPSB1Q96BD6 273 aa13.41□□□□□ -0.26
PKP4-205ENST00000426248 SFRP2Q96HF1 295 aa13.41□□□□□ -0.26
PKP4-205ENST00000426248 TRAPPC2LQ9UL33 140 aa13.41□□□□□ -0.26
PKP4-205ENST00000426248 ZFYVE26Q68DK2 2539 aa13.41□□□□□ -0.26
PKP4-205ENST00000426248 GAGE12BA1L429 117 aa13.41□□□□□ -0.26
PKP4-205ENST00000426248 GAGE10A6NGK3 116 aa13.41□□□□□ -0.26
PKP4-205ENST00000426248 NAPSAO96009 420 aa13.41□□□□□ -0.26
PKP4-205ENST00000426248 EDDM3BP56851 147 aa13.41□□□□□ -0.26
PKP4-205ENST00000426248 SERF2P84101 59 aa13.41□□□□□ -0.26
PKP4-205ENST00000426248 MPV17L2Q567V2 206 aa13.41□□□□□ -0.26
PKP4-205ENST00000426248 RFESDQ8TAC1 157 aa13.41□□□□□ -0.26
PKP4-205ENST00000426248 CHTOPQ9Y3Y2 248 aaKnown RBP13.41□□□□□ -0.26
PKP4-205ENST00000426248 LINC01551Q86U37 167 aa13.41□□□□□ -0.26
PKP4-205ENST00000426248 CLUHP3Q96NS8 147 aa13.41□□□□□ -0.26
PKP4-205ENST00000426248 IGHV2-70DA0A0C4DH43 119 aa13.41□□□□□ -0.26
PKP4-205ENST00000426248 ZNF818PQ6ZRF7 136 aa13.41□□□□□ -0.26
PKP4-205ENST00000426248 TAF15Q92804 592 aaKnown RBP eCLIP13.41□□□□□ -0.26
PKP4-205ENST00000426248 FBLN5Q9UBX5 448 aa13.41□□□□□ -0.26
PKP4-205ENST00000426248 CTXND1A0A1B0GTU2 59 aa13.4□□□□□ -0.26
PKP4-205ENST00000426248 IGHG3P01860 377 aa13.4□□□□□ -0.26
PKP4-205ENST00000426248 SRIP30626 198 aa13.4□□□□□ -0.26
PKP4-205ENST00000426248 KIR2DL2P43627 348 aaPredicted RBP13.4□□□□□ -0.26
PKP4-205ENST00000426248 ATP5G3P48201 142 aa13.4□□□□□ -0.26
PKP4-205ENST00000426248 OSR2Q8N2R0 312 aa13.4□□□□□ -0.26
PKP4-205ENST00000426248 RPP25LQ8N5L8 163 aaKnown RBP13.4□□□□□ -0.26
PKP4-205ENST00000426248 DYNLRB1Q9NP97 96 aa13.4□□□□□ -0.26
PKP4-205ENST00000426248 NGBQ9NPG2 151 aa13.4□□□□□ -0.26
PKP4-205ENST00000426248 TRAV1-1A0A0B4J248 108 aa13.4□□□□□ -0.26
PKP4-205ENST00000426248 SRSF10O75494 262 aaKnown RBP13.4□□□□□ -0.26
PKP4-205ENST00000426248 SLC25A6P12236 298 aa13.4□□□□□ -0.26
PKP4-205ENST00000426248 BMI1P35226 326 aa13.4□□□□□ -0.26
PKP4-205ENST00000426248 UQCRFS1P47985 274 aa13.4□□□□□ -0.26
PKP4-205ENST00000426248 OR10P1Q8NGE3 313 aa13.4□□□□□ -0.26
PKP4-205ENST00000426248 RTL8AQ9BWD3 113 aa13.4□□□□□ -0.26
PKP4-205ENST00000426248 M0R2Z0 102 aa13.4□□□□□ -0.26
PKP4-205ENST00000426248 SPRY3O43610 288 aa13.4□□□□□ -0.26
PKP4-205ENST00000426248 SAP30O75446 220 aa13.4□□□□□ -0.26
PKP4-205ENST00000426248 PRDM14Q9GZV8 571 aa13.4□□□□□ -0.26
PKP4-205ENST00000426248 ZNF391Q9UJN7 358 aa13.4□□□□□ -0.26
PKP4-205ENST00000426248 PSG2P11465 335 aa13.39□□□□□ -0.27
PKP4-205ENST00000426248 CTSSP25774 331 aa13.39□□□□□ -0.27
PKP4-205ENST00000426248 MT-CO2P00403 227 aa13.39□□□□□ -0.27
PKP4-205ENST00000426248 PRRX1P54821 245 aa13.39□□□□□ -0.27
PKP4-205ENST00000426248 SAMD13Q5VXD3 122 aa13.39□□□□□ -0.27
PKP4-205ENST00000426248 LYPD6Q86Y78 171 aa13.39□□□□□ -0.27
PKP4-205ENST00000426248 OR2Z1Q8NG97 314 aa13.39□□□□□ -0.27
PKP4-205ENST00000426248 FAM57AQ8TBR7 257 aa13.39□□□□□ -0.27
PKP4-205ENST00000426248 GPR146Q96CH1 333 aa13.39□□□□□ -0.27
PKP4-205ENST00000426248 CHRDL1Q9BU40 450 aa13.39□□□□□ -0.27
PKP4-205ENST00000426248 GNB4Q9HAV0 340 aa13.39□□□□□ -0.27
PKP4-205ENST00000426248 PNRC2Q9NPJ4 139 aaKnown RBP13.39□□□□□ -0.27
PKP4-205ENST00000426248 GTF2H5Q6ZYL4 71 aa13.39□□□□□ -0.27
PKP4-205ENST00000426248 MBD3L1Q8WWY6 194 aa13.39□□□□□ -0.27
PKP4-205ENST00000426248 NAA38Q9BRA0 125 aaKnown RBP13.39□□□□□ -0.27
PKP4-205ENST00000426248 C3orf79P0CE67 100 aa13.38□□□□□ -0.27
PKP4-205ENST00000426248 FAM89BQ8N5H3 189 aa13.38□□□□□ -0.27
PKP4-205ENST00000426248 C16orf97H3BN30 126 aa13.38□□□□□ -0.27
PKP4-205ENST00000426248 USF1P22415 310 aaPredicted RBP13.38□□□□□ -0.27
PKP4-205ENST00000426248 ELOVL5Q9NYP7 299 aa13.38□□□□□ -0.27
PKP4-205ENST00000426248 ANAPC10Q9UM13 185 aa13.38□□□□□ -0.27
PKP4-205ENST00000426248 DOPEY1Q5JWR5 2465 aa13.38□□□□□ -0.27
PKP4-205ENST00000426248 COL5A1P20908 1838 aaPredicted RBP13.38□□□□□ -0.27
PKP4-205ENST00000426248 SNAI2O43623 268 aa13.38□□□□□ -0.27
PKP4-205ENST00000426248 PPBPP02775 128 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms