RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 ASH1LQ9NR48 2969 aaKnown RBP8.83□□□□□ -1
CUX1-205ENST00000425244 ABCA4P78363 2273 aa8.82□□□□□ -1
CUX1-205ENST00000425244 SRRM5B3KS81 715 aa8.82□□□□□ -1
CUX1-205ENST00000425244 PROP1O75360 226 aa8.82□□□□□ -1
CUX1-205ENST00000425244 HTD2P86397 168 aa8.82□□□□□ -1
CUX1-205ENST00000425244 CLEC12BQ2HXU8 276 aa8.82□□□□□ -1
CUX1-205ENST00000425244 MORN2Q502X0 79 aa8.82□□□□□ -1
CUX1-205ENST00000425244 UTF1Q5T230 341 aa8.82□□□□□ -1
CUX1-205ENST00000425244 GFI1BQ5VTD9 330 aa8.82□□□□□ -1
CUX1-205ENST00000425244 GCSAMQ8N6F7 178 aa8.82□□□□□ -1
CUX1-205ENST00000425244 DEFB108BQ8NET1 73 aa8.82□□□□□ -1
CUX1-205ENST00000425244 HEYLQ9NQ87 328 aaPredicted RBP8.82□□□□□ -1
CUX1-205ENST00000425244 TUBG2Q9NRH3 451 aa8.82□□□□□ -1
CUX1-205ENST00000425244 RALYQ9UKM9 306 aaKnown RBP8.82□□□□□ -1
CUX1-205ENST00000425244 GOLT1BQ9Y3E0 138 aa8.82□□□□□ -1
CUX1-205ENST00000425244 ANKHD1Q8IWZ3 2542 aaKnown RBP8.82□□□□□ -1
CUX1-205ENST00000425244 C15orf62A8K5M9 175 aa8.82□□□□□ -1
CUX1-205ENST00000425244 MGST3O14880 152 aa8.82□□□□□ -1
CUX1-205ENST00000425244 PAGE4O60829 102 aa8.82□□□□□ -1
CUX1-205ENST00000425244 GZMHP20718 246 aa8.82□□□□□ -1
CUX1-205ENST00000425244 HOXA5P20719 270 aa8.82□□□□□ -1
CUX1-205ENST00000425244 S100A2P29034 98 aa8.82□□□□□ -1
CUX1-205ENST00000425244 ERVK-16P61578 105 aa8.82□□□□□ -1
CUX1-205ENST00000425244 TMEM241Q24JQ0 296 aa8.82□□□□□ -1
CUX1-205ENST00000425244 DNLZQ5SXM8 178 aa8.82□□□□□ -1
CUX1-205ENST00000425244 TRAT1Q6PIZ9 186 aa8.82□□□□□ -1
CUX1-205ENST00000425244 TCTEX1D1Q8N7M0 179 aa8.82□□□□□ -1
CUX1-205ENST00000425244 PPP1R35Q8TAP8 253 aa8.82□□□□□ -1
CUX1-205ENST00000425244 PRO1933Q9H354 126 aa8.82□□□□□ -1
CUX1-205ENST00000425244 NAT8Q9UHE5 227 aa8.82□□□□□ -1
CUX1-205ENST00000425244 TRAV3A0A0B4J244 114 aa8.81□□□□□ -1
CUX1-205ENST00000425244 PRB1P04280 392 aa8.81□□□□□ -1
CUX1-205ENST00000425244 ZNF134P52741 427 aa8.81□□□□□ -1
CUX1-205ENST00000425244 KLF3P57682 345 aaPredicted RBP8.81□□□□□ -1
CUX1-205ENST00000425244 GAMTQ14353 236 aa8.81□□□□□ -1
CUX1-205ENST00000425244 C16orf82Q7Z2V1 217 aa8.81□□□□□ -1
CUX1-205ENST00000425244 ITLN1Q8WWA0 313 aa8.81□□□□□ -1
CUX1-205ENST00000425244 SDSLQ96GA7 329 aa8.81□□□□□ -1
CUX1-205ENST00000425244 ATG101Q9BSB4 218 aa8.81□□□□□ -1
CUX1-205ENST00000425244 OR6C3Q9NZP0 311 aa8.81□□□□□ -1
CUX1-205ENST00000425244 TACC2O95359 2948 aa8.81□□□□□ -1
CUX1-205ENST00000425244 TRAV38-1A0A0B4J264 116 aa8.81□□□□□ -1
CUX1-205ENST00000425244 IFITM10A6NMD0 228 aa8.81□□□□□ -1
CUX1-205ENST00000425244 C17orf112F2Z3M2 114 aa8.81□□□□□ -1
CUX1-205ENST00000425244 KBTBD11O94819 623 aa8.81□□□□□ -1
CUX1-205ENST00000425244 TRGC1P0CF51 173 aa8.81□□□□□ -1
CUX1-205ENST00000425244 CDX1P47902 265 aaPredicted RBP8.81□□□□□ -1
CUX1-205ENST00000425244 UBE2G2P60604 165 aa8.81□□□□□ -1
CUX1-205ENST00000425244 CENPVQ7Z7K6 275 aaPredicted RBP8.81□□□□□ -1
CUX1-205ENST00000425244 LINC01560Q8TB33 94 aa8.81□□□□□ -1
CUX1-205ENST00000425244 Q8TCH9 128 aa8.81□□□□□ -1
CUX1-205ENST00000425244 FRZBQ92765 325 aa8.81□□□□□ -1
CUX1-205ENST00000425244 SNX22Q96L94 193 aa8.81□□□□□ -1
CUX1-205ENST00000425244 WFIKKN1Q96NZ8 548 aa8.81□□□□□ -1
CUX1-205ENST00000425244 S1PR3Q99500 378 aa8.81□□□□□ -1
CUX1-205ENST00000425244 PARLQ9H300 379 aa8.81□□□□□ -1
CUX1-205ENST00000425244 JPT1Q9UK76 154 aa8.81□□□□□ -1
CUX1-205ENST00000425244 PPP1R2P9O14990 202 aa8.8□□□□□ -1
CUX1-205ENST00000425244 HPRT1P00492 218 aa8.8□□□□□ -1
CUX1-205ENST00000425244 ZNF25P17030 456 aaPredicted RBP8.8□□□□□ -1
CUX1-205ENST00000425244 GNLYP22749 145 aa8.8□□□□□ -1
CUX1-205ENST00000425244 CD1BP29016 333 aa8.8□□□□□ -1
CUX1-205ENST00000425244 CDC34P49427 236 aaPredicted RBP8.8□□□□□ -1
CUX1-205ENST00000425244 ADORA2A-AS1P86434 159 aa8.8□□□□□ -1
CUX1-205ENST00000425244 BSXQ3C1V8 233 aa8.8□□□□□ -1
CUX1-205ENST00000425244 DUX4L9Q6RFH8 374 aaPredicted RBP8.8□□□□□ -1
CUX1-205ENST00000425244 PATZ1Q9HBE1 687 aaKnown RBP8.8□□□□□ -1
CUX1-205ENST00000425244 CALYQ9NYX4 217 aa8.8□□□□□ -1
CUX1-205ENST00000425244 HCFC1P51610 2035 aa8.8□□□□□ -1
CUX1-205ENST00000425244 OPN1MWP04001 364 aa8.8□□□□□ -1
CUX1-205ENST00000425244 LINC00614P0C842 121 aa8.8□□□□□ -1
CUX1-205ENST00000425244 OPN1MW2P0DN77 364 aa8.8□□□□□ -1
CUX1-205ENST00000425244 OPN1MW3P0DN78 364 aa8.8□□□□□ -1
CUX1-205ENST00000425244 RND2P52198 227 aa8.8□□□□□ -1
CUX1-205ENST00000425244 GNB2P62879 340 aa8.8□□□□□ -1
CUX1-205ENST00000425244 ACOT6Q3I5F7 207 aaPredicted RBP8.8□□□□□ -1
CUX1-205ENST00000425244 CST9LP1Q5W188 147 aa8.8□□□□□ -1
CUX1-205ENST00000425244 CYP2G1PQ6ZSU1 146 aa8.8□□□□□ -1
CUX1-205ENST00000425244 IFI27L2Q9H2X8 130 aa8.8□□□□□ -1
CUX1-205ENST00000425244 ELOVL5Q9NYP7 299 aa8.8□□□□□ -1
CUX1-205ENST00000425244 HRNRQ86YZ3 2850 aaPredicted RBP8.8□□□□□ -1
CUX1-205ENST00000425244 ZNF462Q96JM2 2506 aa8.8□□□□□ -1
CUX1-205ENST00000425244 H7BYZ3 331 aa8.79□□□□□ -1
CUX1-205ENST00000425244 RRHO14718 337 aa8.79□□□□□ -1
CUX1-205ENST00000425244 SNRPCP09234 159 aaKnown RBP8.79□□□□□ -1
CUX1-205ENST00000425244 CD40P25942 277 aa8.79□□□□□ -1
CUX1-205ENST00000425244 LOXL3P58215 753 aa8.79□□□□□ -1
CUX1-205ENST00000425244 RPL23P62829 140 aaKnown RBP8.79□□□□□ -1
CUX1-205ENST00000425244 BSPH1Q075Z2 132 aa8.79□□□□□ -1
CUX1-205ENST00000425244 ABHD12Q8N2K0 398 aa8.79□□□□□ -1
CUX1-205ENST00000425244 OR10D4PQ8NGN7 298 aa8.79□□□□□ -1
CUX1-205ENST00000425244 ABHD5Q8WTS1 349 aa8.79□□□□□ -1
CUX1-205ENST00000425244 HINT2Q9BX68 163 aa8.79□□□□□ -1
CUX1-205ENST00000425244 MANBALQ9NQG1 85 aa8.79□□□□□ -1
CUX1-205ENST00000425244 TMEM140Q9NV12 185 aa8.79□□□□□ -1
CUX1-205ENST00000425244 TMEM242Q9NWH2 141 aa8.79□□□□□ -1
CUX1-205ENST00000425244 AURKAIP1Q9NWT8 199 aaPredicted RBP8.79□□□□□ -1
CUX1-205ENST00000425244 GAR1Q9NY12 217 aaKnown RBP8.79□□□□□ -1
CUX1-205ENST00000425244 A0A1W2PPV4 95 aa8.79□□□□□ -1
CUX1-205ENST00000425244 C11orf94C9JXX5 98 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms