RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 FGF12P61328 243 aa9.41□□□□□ -0.9
SEC61A1-202ENST00000424880 PSG9Q00887 426 aa9.41□□□□□ -0.9
SEC61A1-202ENST00000424880 GABRA6Q16445 453 aa9.41□□□□□ -0.9
SEC61A1-202ENST00000424880 SMIM21Q3B7S5 101 aa9.41□□□□□ -0.9
SEC61A1-202ENST00000424880 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.41□□□□□ -0.9
SEC61A1-202ENST00000424880 YRDCQ86U90 279 aaKnown RBP9.41□□□□□ -0.9
SEC61A1-202ENST00000424880 MKXQ8IYA7 352 aa9.41□□□□□ -0.9
SEC61A1-202ENST00000424880 Q8N7P7 452 aa9.41□□□□□ -0.9
SEC61A1-202ENST00000424880 ABHD3Q8WU67 409 aa9.41□□□□□ -0.9
SEC61A1-202ENST00000424880 SGK494Q96LW2 274 aa9.41□□□□□ -0.9
SEC61A1-202ENST00000424880 LINC00479Q96M42 142 aa9.41□□□□□ -0.9
SEC61A1-202ENST00000424880 KCNIP2Q9NS61 270 aa9.41□□□□□ -0.9
SEC61A1-202ENST00000424880 V9GYV3 84 aa9.41□□□□□ -0.9
SEC61A1-202ENST00000424880 EXPH5Q8NEV8 1989 aa9.41□□□□□ -0.9
SEC61A1-202ENST00000424880 C9orf172C9J069 976 aa9.41□□□□□ -0.9
SEC61A1-202ENST00000424880 CORTO00230 105 aa9.41□□□□□ -0.9
SEC61A1-202ENST00000424880 PRB4P10163 310 aaPredicted RBP9.41□□□□□ -0.9
SEC61A1-202ENST00000424880 NPY1RP25929 384 aa9.41□□□□□ -0.9
SEC61A1-202ENST00000424880 CD1BP29016 333 aa9.41□□□□□ -0.9
SEC61A1-202ENST00000424880 FOXG1P55316 489 aaPredicted RBP9.41□□□□□ -0.9
SEC61A1-202ENST00000424880 TRIM61Q5EBN2 209 aa9.41□□□□□ -0.9
SEC61A1-202ENST00000424880 C10orf128Q5T292 105 aa9.41□□□□□ -0.9
SEC61A1-202ENST00000424880 VWA1Q6PCB0 445 aa9.41□□□□□ -0.9
SEC61A1-202ENST00000424880 WDR74Q6RFH5 385 aaPredicted RBP9.41□□□□□ -0.9
SEC61A1-202ENST00000424880 TMEM136Q6ZRR5 245 aa9.41□□□□□ -0.9
SEC61A1-202ENST00000424880 OR2T6Q8NHC8 308 aa9.41□□□□□ -0.9
SEC61A1-202ENST00000424880 TMEM54Q969K7 222 aa9.41□□□□□ -0.9
SEC61A1-202ENST00000424880 LSM10Q969L4 123 aaKnown RBP9.41□□□□□ -0.9
SEC61A1-202ENST00000424880 OR8B2Q96RD0 313 aa9.41□□□□□ -0.9
SEC61A1-202ENST00000424880 SFXN3Q9BWM7 321 aa9.41□□□□□ -0.9
SEC61A1-202ENST00000424880 ABCA1O95477 2261 aa9.41□□□□□ -0.9
SEC61A1-202ENST00000424880 ICE1Q9Y2F5 2266 aa9.41□□□□□ -0.9
SEC61A1-202ENST00000424880 J3QR06 171 aa9.41□□□□□ -0.9
SEC61A1-202ENST00000424880 OR10J4P0C629 311 aa9.41□□□□□ -0.9
SEC61A1-202ENST00000424880 FOXA3P55318 350 aaPredicted RBP9.41□□□□□ -0.9
SEC61A1-202ENST00000424880 PDLIM3Q53GG5 364 aaPredicted RBP9.41□□□□□ -0.9
SEC61A1-202ENST00000424880 CENPWQ5EE01 88 aa9.41□□□□□ -0.9
SEC61A1-202ENST00000424880 FAM71F2Q6NXP2 309 aa9.41□□□□□ -0.9
SEC61A1-202ENST00000424880 ABHD12Q8N2K0 398 aa9.41□□□□□ -0.9
SEC61A1-202ENST00000424880 RFESDQ8TAC1 157 aa9.41□□□□□ -0.9
SEC61A1-202ENST00000424880 EAF1Q96JC9 268 aaPredicted RBP9.41□□□□□ -0.9
SEC61A1-202ENST00000424880 COL25A1Q9BXS0 654 aaPredicted RBP9.41□□□□□ -0.9
SEC61A1-202ENST00000424880 FNDC4Q9H6D8 234 aaPredicted RBP9.41□□□□□ -0.9
SEC61A1-202ENST00000424880 LRRC30A6NM36 301 aa9.4□□□□□ -0.9
SEC61A1-202ENST00000424880 DLL1O00548 723 aa9.4□□□□□ -0.9
SEC61A1-202ENST00000424880 ZNF207O43670 478 aaKnown RBP9.4□□□□□ -0.9
SEC61A1-202ENST00000424880 VAMP5O95183 116 aa9.4□□□□□ -0.9
SEC61A1-202ENST00000424880 FASLGP48023 281 aa9.4□□□□□ -0.9
SEC61A1-202ENST00000424880 Q6ZS49 121 aa9.4□□□□□ -0.9
SEC61A1-202ENST00000424880 OR4P4Q8NGL7 312 aa9.4□□□□□ -0.9
SEC61A1-202ENST00000424880 OR4S2Q8NH73 311 aa9.4□□□□□ -0.9
SEC61A1-202ENST00000424880 STRADBQ9C0K7 418 aa9.4□□□□□ -0.9
SEC61A1-202ENST00000424880 OR2H1Q9GZK4 316 aa9.4□□□□□ -0.9
SEC61A1-202ENST00000424880 DLL3Q9NYJ7 618 aa9.4□□□□□ -0.9
SEC61A1-202ENST00000424880 BOD1L1Q8NFC6 3051 aa9.4□□□□□ -0.9
SEC61A1-202ENST00000424880 TNCP24821 2201 aa9.4□□□□□ -0.9
SEC61A1-202ENST00000424880 A0A1W2PR77 199 aa9.4□□□□□ -0.91
SEC61A1-202ENST00000424880 DEGS1O15121 323 aa9.4□□□□□ -0.91
SEC61A1-202ENST00000424880 TOX4O94842 621 aa9.4□□□□□ -0.91
SEC61A1-202ENST00000424880 NFAM1Q8NET5 270 aaPredicted RBP9.4□□□□□ -0.91
SEC61A1-202ENST00000424880 FOXB1Q99853 325 aa9.4□□□□□ -0.91
SEC61A1-202ENST00000424880 TRAV9-2A0A087WT02 112 aa9.39□□□□□ -0.91
SEC61A1-202ENST00000424880 FAM181BA6NEQ2 426 aa9.39□□□□□ -0.91
SEC61A1-202ENST00000424880 J3QW42 95 aa9.39□□□□□ -0.91
SEC61A1-202ENST00000424880 GNG7O60262 68 aa9.39□□□□□ -0.91
SEC61A1-202ENST00000424880 CCL3P10147 92 aa9.39□□□□□ -0.91
SEC61A1-202ENST00000424880 OR52L2PQ8NGH6 319 aa9.39□□□□□ -0.91
SEC61A1-202ENST00000424880 TMEM38BQ9NVV0 291 aa9.39□□□□□ -0.91
SEC61A1-202ENST00000424880 KALRNO60229 2985 aa9.39□□□□□ -0.91
SEC61A1-202ENST00000424880 PPIAL4DF5H284 164 aa9.39□□□□□ -0.91
SEC61A1-202ENST00000424880 TNFSF15O95150 251 aa9.39□□□□□ -0.91
SEC61A1-202ENST00000424880 OR10J3Q5JRS4 329 aa9.39□□□□□ -0.91
SEC61A1-202ENST00000424880 C18orf32Q8TCD1 76 aa9.39□□□□□ -0.91
SEC61A1-202ENST00000424880 C5orf30Q96GV9 206 aa9.39□□□□□ -0.91
SEC61A1-202ENST00000424880 PRRG4Q9BZD6 226 aa9.39□□□□□ -0.91
SEC61A1-202ENST00000424880 WDR54Q9H977 334 aa9.39□□□□□ -0.91
SEC61A1-202ENST00000424880 LIN7CQ9NUP9 197 aaKnown RBP9.39□□□□□ -0.91
SEC61A1-202ENST00000424880 TRBV9A0A0B4J1U6 114 aa9.39□□□□□ -0.91
SEC61A1-202ENST00000424880 C17orf112F2Z3M2 114 aa9.39□□□□□ -0.91
SEC61A1-202ENST00000424880 APCSP02743 223 aa9.39□□□□□ -0.91
SEC61A1-202ENST00000424880 USF1P22415 310 aaPredicted RBP9.39□□□□□ -0.91
SEC61A1-202ENST00000424880 ZNF138P52744 262 aa9.39□□□□□ -0.91
SEC61A1-202ENST00000424880 SUMO3P55854 103 aaPredicted RBP9.39□□□□□ -0.91
SEC61A1-202ENST00000424880 CLDN15P56746 228 aa9.39□□□□□ -0.91
SEC61A1-202ENST00000424880 BRWD1-AS2P59051 145 aa9.39□□□□□ -0.91
SEC61A1-202ENST00000424880 TRIP6Q15654 476 aaKnown RBP9.39□□□□□ -0.91
SEC61A1-202ENST00000424880 DEFB126Q9BYW3 111 aa9.39□□□□□ -0.91
SEC61A1-202ENST00000424880 C19orf67A6NJJ6 358 aa9.38□□□□□ -0.91
SEC61A1-202ENST00000424880 GNG4P50150 75 aa9.38□□□□□ -0.91
SEC61A1-202ENST00000424880 C19orf35Q6ZS72 473 aa9.38□□□□□ -0.91
SEC61A1-202ENST00000424880 AAED1Q7RTV5 226 aa9.38□□□□□ -0.91
SEC61A1-202ENST00000424880 MS4A5Q9H3V2 200 aa9.38□□□□□ -0.91
SEC61A1-202ENST00000424880 SMPXQ9UHP9 88 aa9.38□□□□□ -0.91
SEC61A1-202ENST00000424880 LRP5LA4QPB2 252 aa9.38□□□□□ -0.91
SEC61A1-202ENST00000424880 OR4C46A6NHA9 309 aa9.38□□□□□ -0.91
SEC61A1-202ENST00000424880 CD27P26842 260 aa9.38□□□□□ -0.91
SEC61A1-202ENST00000424880 H2BFWTQ7Z2G1 175 aa9.38□□□□□ -0.91
SEC61A1-202ENST00000424880 MRPL21Q7Z2W9 205 aaKnown RBP9.38□□□□□ -0.91
SEC61A1-202ENST00000424880 CXorf67Q86X51 503 aaPredicted RBP9.38□□□□□ -0.91
SEC61A1-202ENST00000424880 DEFB125Q8N687 156 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms