RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 C5orf56Q8N8D9 126 aa10.66□□□□□ -0.7
PRPF39-202ENST00000424478 SSMEM1Q8WWF3 244 aa10.66□□□□□ -0.7
PRPF39-202ENST00000424478 IL22RA2Q969J5 263 aa10.66□□□□□ -0.7
PRPF39-202ENST00000424478 FAM181BA6NEQ2 426 aa10.65□□□□□ -0.7
PRPF39-202ENST00000424478 CGB1A6NKQ9 187 aa10.65□□□□□ -0.7
PRPF39-202ENST00000424478 CNIH1O95406 144 aa10.65□□□□□ -0.7
PRPF39-202ENST00000424478 MBPP02686 304 aaPredicted RBP10.65□□□□□ -0.7
PRPF39-202ENST00000424478 RPL8P62917 257 aaKnown RBP10.65□□□□□ -0.7
PRPF39-202ENST00000424478 PRSS8Q16651 343 aa10.65□□□□□ -0.7
PRPF39-202ENST00000424478 PPP1R1CQ8WVI7 109 aa10.65□□□□□ -0.7
PRPF39-202ENST00000424478 ST6GAL2Q96JF0 529 aa10.65□□□□□ -0.7
PRPF39-202ENST00000424478 NOL4LQ96MY1 436 aaPredicted RBP10.65□□□□□ -0.7
PRPF39-202ENST00000424478 VPREB3Q9UKI3 123 aa10.65□□□□□ -0.7
PRPF39-202ENST00000424478 OR51B2Q9Y5P1 312 aa10.65□□□□□ -0.7
PRPF39-202ENST00000424478 FBN1P35555 2871 aaKnown RBP10.65□□□□□ -0.7
PRPF39-202ENST00000424478 SSSCA1O60232 199 aa10.65□□□□□ -0.7
PRPF39-202ENST00000424478 SNAPC5O75971 98 aa10.65□□□□□ -0.7
PRPF39-202ENST00000424478 CX3CL1P78423 397 aa10.65□□□□□ -0.7
PRPF39-202ENST00000424478 LSM10Q969L4 123 aaKnown RBP10.65□□□□□ -0.7
PRPF39-202ENST00000424478 TEX50A0A1B0GTY4 177 aa10.65□□□□□ -0.71
PRPF39-202ENST00000424478 BTBD17A6NE02 478 aa10.65□□□□□ -0.71
PRPF39-202ENST00000424478 WRBO00258 174 aa10.65□□□□□ -0.71
PRPF39-202ENST00000424478 B3GALNT1O75752 331 aa10.65□□□□□ -0.71
PRPF39-202ENST00000424478 NDUFA3O95167 84 aa10.65□□□□□ -0.71
PRPF39-202ENST00000424478 NPBQ8NG41 125 aa10.65□□□□□ -0.71
PRPF39-202ENST00000424478 OR2T35Q8NGX2 323 aa10.65□□□□□ -0.71
PRPF39-202ENST00000424478 C2orf50Q96LR7 162 aa10.65□□□□□ -0.71
PRPF39-202ENST00000424478 RASL11BQ9BPW5 248 aa10.65□□□□□ -0.71
PRPF39-202ENST00000424478 NEURL2Q9BR09 285 aa10.65□□□□□ -0.71
PRPF39-202ENST00000424478 WSB1Q9Y6I7 421 aa10.65□□□□□ -0.71
PRPF39-202ENST00000424478 C15orf61A6NNL5 157 aa10.64□□□□□ -0.71
PRPF39-202ENST00000424478 CRLF1O75462 422 aa10.64□□□□□ -0.71
PRPF39-202ENST00000424478 DYNLT3P51808 116 aa10.64□□□□□ -0.71
PRPF39-202ENST00000424478 OR4D5Q8NGN0 318 aa10.64□□□□□ -0.71
PRPF39-202ENST00000424478 TMEM167AQ8TBQ9 72 aa10.64□□□□□ -0.71
PRPF39-202ENST00000424478 PARP11Q9NR21 331 aa10.64□□□□□ -0.71
PRPF39-202ENST00000424478 TMEM160Q9NX00 188 aa10.64□□□□□ -0.71
PRPF39-202ENST00000424478 BET1LQ9NYM9 111 aa10.64□□□□□ -0.71
PRPF39-202ENST00000424478 OR5AC2Q9NZP5 309 aa10.64□□□□□ -0.71
PRPF39-202ENST00000424478 MOB4Q9Y3A3 225 aa10.64□□□□□ -0.71
PRPF39-202ENST00000424478 H0YIZ8 118 aa10.64□□□□□ -0.71
PRPF39-202ENST00000424478 GPR137BO60478 399 aa10.64□□□□□ -0.71
PRPF39-202ENST00000424478 PRH1P02810 166 aa10.64□□□□□ -0.71
PRPF39-202ENST00000424478 IL6RP08887 468 aaPredicted RBP10.64□□□□□ -0.71
PRPF39-202ENST00000424478 AREGP15514 252 aa10.64□□□□□ -0.71
PRPF39-202ENST00000424478 HLA-GP17693 338 aa10.64□□□□□ -0.71
PRPF39-202ENST00000424478 POU2AF1Q16633 256 aa10.64□□□□□ -0.71
PRPF39-202ENST00000424478 THNSL2Q86YJ6 484 aa10.64□□□□□ -0.71
PRPF39-202ENST00000424478 IGHV7-81A0A0B4J1V7 117 aa10.63□□□□□ -0.71
PRPF39-202ENST00000424478 MSGN1A6NI15 193 aa10.63□□□□□ -0.71
PRPF39-202ENST00000424478 G3V318 75 aa10.63□□□□□ -0.71
PRPF39-202ENST00000424478 ACTL6BO94805 426 aa10.63□□□□□ -0.71
PRPF39-202ENST00000424478 TMEM50AO95807 157 aa10.63□□□□□ -0.71
PRPF39-202ENST00000424478 NKX2-5P52952 324 aaPredicted RBP10.63□□□□□ -0.71
PRPF39-202ENST00000424478 FXYD3Q14802 87 aa10.63□□□□□ -0.71
PRPF39-202ENST00000424478 AKAP14Q86UN6 197 aa10.63□□□□□ -0.71
PRPF39-202ENST00000424478 COMMD5Q9GZQ3 224 aa10.63□□□□□ -0.71
PRPF39-202ENST00000424478 RBKSQ9H477 322 aa10.63□□□□□ -0.71
PRPF39-202ENST00000424478 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.63□□□□□ -0.71
PRPF39-202ENST00000424478 FAM212BQ9NTI7 297 aaPredicted RBP10.63□□□□□ -0.71
PRPF39-202ENST00000424478 PAIP2BQ9ULR5 123 aaKnown RBP10.63□□□□□ -0.71
PRPF39-202ENST00000424478 G3V3Q6 166 aa10.63□□□□□ -0.71
PRPF39-202ENST00000424478 PITX3O75364 302 aa10.63□□□□□ -0.71
PRPF39-202ENST00000424478 TMEM14BQ9NUH8 114 aa10.63□□□□□ -0.71
PRPF39-202ENST00000424478 RCL1Q9Y2P8 373 aaKnown RBP10.63□□□□□ -0.71
PRPF39-202ENST00000424478 TRAV14DV4A0A0A6YYC5 116 aa10.63□□□□□ -0.71
PRPF39-202ENST00000424478 CEBPZOSA8MTT3 80 aa10.63□□□□□ -0.71
PRPF39-202ENST00000424478 PFDN1O60925 122 aa10.63□□□□□ -0.71
PRPF39-202ENST00000424478 NKX2-1P43699 371 aaPredicted RBP10.63□□□□□ -0.71
PRPF39-202ENST00000424478 ECSCRQ19T08 205 aa10.63□□□□□ -0.71
PRPF39-202ENST00000424478 C10orf99Q6UWK7 81 aa10.63□□□□□ -0.71
PRPF39-202ENST00000424478 TEX45Q8NA69 505 aa10.63□□□□□ -0.71
PRPF39-202ENST00000424478 LFNGQ8NES3 379 aa10.63□□□□□ -0.71
PRPF39-202ENST00000424478 SRSF12Q8WXF0 261 aaKnown RBP10.63□□□□□ -0.71
PRPF39-202ENST00000424478 A0A1B0GU03 582 aa10.62□□□□□ -0.71
PRPF39-202ENST00000424478 ATP6V0E1O15342 81 aa10.62□□□□□ -0.71
PRPF39-202ENST00000424478 TNFRSF9Q07011 255 aa10.62□□□□□ -0.71
PRPF39-202ENST00000424478 LCNL1Q6ZST4 164 aa10.62□□□□□ -0.71
PRPF39-202ENST00000424478 PRDM13Q9H4Q3 707 aa10.62□□□□□ -0.71
PRPF39-202ENST00000424478 K7EPK0 472 aa10.62□□□□□ -0.71
PRPF39-202ENST00000424478 FAM157CP0CG43 387 aa10.62□□□□□ -0.71
PRPF39-202ENST00000424478 IL15RAQ13261 267 aa10.62□□□□□ -0.71
PRPF39-202ENST00000424478 OR11H4Q8NGC9 324 aa10.62□□□□□ -0.71
PRPF39-202ENST00000424478 BOLA2-SMG1P6H3BVE0 249 aa10.61□□□□□ -0.71
PRPF39-202ENST00000424478 ATG12O94817 140 aa10.61□□□□□ -0.71
PRPF39-202ENST00000424478 IGHV3-48P01763 117 aa10.61□□□□□ -0.71
PRPF39-202ENST00000424478 WT1-ASQ06250 92 aa10.61□□□□□ -0.71
PRPF39-202ENST00000424478 VSTM2AQ8TAG5 236 aa10.61□□□□□ -0.71
PRPF39-202ENST00000424478 PITPNC1Q9UKF7 332 aa10.61□□□□□ -0.71
PRPF39-202ENST00000424478 DUXBA0A1W2PPF3 345 aa10.61□□□□□ -0.71
PRPF39-202ENST00000424478 HOXA1P49639 335 aaPredicted RBP10.61□□□□□ -0.71
PRPF39-202ENST00000424478 COMPP49747 757 aaPredicted RBP10.61□□□□□ -0.71
PRPF39-202ENST00000424478 TUSC1Q2TAM9 212 aa10.61□□□□□ -0.71
PRPF39-202ENST00000424478 MMD2Q8IY49 270 aa10.61□□□□□ -0.71
PRPF39-202ENST00000424478 TEX29Q8N6K0 151 aa10.61□□□□□ -0.71
PRPF39-202ENST00000424478 OR5T1Q8NG75 326 aa10.61□□□□□ -0.71
PRPF39-202ENST00000424478 OR5R1Q8NH85 324 aa10.61□□□□□ -0.71
PRPF39-202ENST00000424478 ZNF418Q8TF45 676 aaPredicted RBP10.61□□□□□ -0.71
PRPF39-202ENST00000424478 C1RLQ9NZP8 487 aa10.61□□□□□ -0.71
PRPF39-202ENST00000424478 MBD2Q9UBB5 411 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms