RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 HLA-DQB1P01920 261 aa12.24□□□□□ -0.45
CHCHD3-202ENST00000423635 REG1AP05451 166 aa12.24□□□□□ -0.45
CHCHD3-202ENST00000423635 RANBP1P43487 201 aa12.24□□□□□ -0.45
CHCHD3-202ENST00000423635 CMC4P56277 68 aaPredicted RBP12.24□□□□□ -0.45
CHCHD3-202ENST00000423635 CLDN12P56749 244 aa12.24□□□□□ -0.45
CHCHD3-202ENST00000423635 RPL8P62917 257 aaKnown RBP12.24□□□□□ -0.45
CHCHD3-202ENST00000423635 OR2B11Q5JQS5 317 aa12.24□□□□□ -0.45
CHCHD3-202ENST00000423635 APRG1Q8IVJ8 170 aa12.24□□□□□ -0.45
CHCHD3-202ENST00000423635 OR4S2Q8NH73 311 aa12.24□□□□□ -0.45
CHCHD3-202ENST00000423635 CYGBQ8WWM9 190 aa12.24□□□□□ -0.45
CHCHD3-202ENST00000423635 THYN1Q9P016 225 aa12.24□□□□□ -0.45
CHCHD3-202ENST00000423635 IGKV1D-8A0A087WSZ0 117 aa12.23□□□□□ -0.45
CHCHD3-202ENST00000423635 TMEM272A0A1B0GTI8 110 aa12.23□□□□□ -0.45
CHCHD3-202ENST00000423635 ERICH4A6NGS2 130 aa12.23□□□□□ -0.45
CHCHD3-202ENST00000423635 K7EMT4 169 aa12.23□□□□□ -0.45
CHCHD3-202ENST00000423635 MFNGO00587 321 aa12.23□□□□□ -0.45
CHCHD3-202ENST00000423635 XRCC3O43542 346 aa12.23□□□□□ -0.45
CHCHD3-202ENST00000423635 RPA2P15927 270 aa12.23□□□□□ -0.45
CHCHD3-202ENST00000423635 GNB3P16520 340 aa12.23□□□□□ -0.45
CHCHD3-202ENST00000423635 CD36P16671 472 aa12.23□□□□□ -0.45
CHCHD3-202ENST00000423635 PLA2G7Q13093 441 aa12.23□□□□□ -0.45
CHCHD3-202ENST00000423635 EIF4EBP1Q13541 118 aaPredicted RBP12.23□□□□□ -0.45
CHCHD3-202ENST00000423635 OR10R2Q8NGX6 335 aa12.23□□□□□ -0.45
CHCHD3-202ENST00000423635 VN1R17PQ8TDU5 208 aa12.23□□□□□ -0.45
CHCHD3-202ENST00000423635 HSD17B10Q99714 261 aaKnown RBP12.23□□□□□ -0.45
CHCHD3-202ENST00000423635 KRTAP4-5Q9BYR2 181 aa12.23□□□□□ -0.45
CHCHD3-202ENST00000423635 HRH4Q9H3N8 390 aa12.23□□□□□ -0.45
CHCHD3-202ENST00000423635 OR2W1Q9Y3N9 320 aa12.23□□□□□ -0.45
CHCHD3-202ENST00000423635 J3QRK9 145 aa12.22□□□□□ -0.45
CHCHD3-202ENST00000423635 CTSDP07339 412 aaPredicted RBP12.22□□□□□ -0.45
CHCHD3-202ENST00000423635 HLA-GP17693 338 aa12.22□□□□□ -0.45
CHCHD3-202ENST00000423635 CRHBPP24387 322 aa12.22□□□□□ -0.45
CHCHD3-202ENST00000423635 TMEM91Q6ZNR0 172 aa12.22□□□□□ -0.45
CHCHD3-202ENST00000423635 SSX9Q7RTT3 188 aa12.22□□□□□ -0.45
CHCHD3-202ENST00000423635 OR4A5Q8NH83 315 aa12.22□□□□□ -0.45
CHCHD3-202ENST00000423635 MND1Q9BWT6 205 aa12.22□□□□□ -0.45
CHCHD3-202ENST00000423635 BET1LQ9NYM9 111 aa12.22□□□□□ -0.45
CHCHD3-202ENST00000423635 PRSS29PA6NIE9 313 aa12.21□□□□□ -0.45
CHCHD3-202ENST00000423635 RAB27BO00194 218 aa12.21□□□□□ -0.45
CHCHD3-202ENST00000423635 NDUFA4O00483 81 aa12.21□□□□□ -0.45
CHCHD3-202ENST00000423635 DEFB4AO15263 64 aa12.21□□□□□ -0.45
CHCHD3-202ENST00000423635 HRASP01112 189 aa12.21□□□□□ -0.45
CHCHD3-202ENST00000423635 OR2B8PP59922 312 aa12.21□□□□□ -0.45
CHCHD3-202ENST00000423635 SPHARQ15513 63 aa12.21□□□□□ -0.45
CHCHD3-202ENST00000423635 ZNF124Q15973 351 aa12.21□□□□□ -0.45
CHCHD3-202ENST00000423635 MFSD4AQ8N468 514 aa12.21□□□□□ -0.45
CHCHD3-202ENST00000423635 DHRSXQ8N5I4 330 aa12.21□□□□□ -0.45
CHCHD3-202ENST00000423635 BSCL2Q96G97 398 aaPredicted RBP12.21□□□□□ -0.45
CHCHD3-202ENST00000423635 ATP6V0BQ99437 205 aa12.21□□□□□ -0.45
CHCHD3-202ENST00000423635 SRSF8Q9BRL6 282 aaKnown RBP12.21□□□□□ -0.45
CHCHD3-202ENST00000423635 LSM2Q9Y333 95 aaKnown RBP12.21□□□□□ -0.45
CHCHD3-202ENST00000423635 ETV7Q9Y603 341 aa12.21□□□□□ -0.45
CHCHD3-202ENST00000423635 IGLC7A0M8Q6 106 aa12.2□□□□□ -0.46
CHCHD3-202ENST00000423635 CTXN2P0C2S0 81 aa12.2□□□□□ -0.46
CHCHD3-202ENST00000423635 HIST1H1DP16402 221 aaKnown RBP12.2□□□□□ -0.46
CHCHD3-202ENST00000423635 GADD45AP24522 165 aa12.2□□□□□ -0.46
CHCHD3-202ENST00000423635 BPIFB6Q8NFQ5 453 aa12.2□□□□□ -0.46
CHCHD3-202ENST00000423635 TCTEX1D2Q8WW35 142 aa12.2□□□□□ -0.46
CHCHD3-202ENST00000423635 TMEM203Q969S6 136 aa12.2□□□□□ -0.46
CHCHD3-202ENST00000423635 V9GY05 133 aa12.2□□□□□ -0.46
CHCHD3-202ENST00000423635 OR2T8A6NH00 312 aa12.19□□□□□ -0.46
CHCHD3-202ENST00000423635 RTL8CO15255 209 aa12.19□□□□□ -0.46
CHCHD3-202ENST00000423635 ARL6IP5O75915 188 aa12.19□□□□□ -0.46
CHCHD3-202ENST00000423635 NFYAP23511 347 aaPredicted RBP12.19□□□□□ -0.46
CHCHD3-202ENST00000423635 TALDO1P37837 337 aa12.19□□□□□ -0.46
CHCHD3-202ENST00000423635 SPSB3Q6PJ21 355 aa12.19□□□□□ -0.46
CHCHD3-202ENST00000423635 ZNF66Q6ZN08 573 aa12.19□□□□□ -0.46
CHCHD3-202ENST00000423635 AIFM2Q9BRQ8 373 aa12.19□□□□□ -0.46
CHCHD3-202ENST00000423635 SMPXQ9UHP9 88 aa12.19□□□□□ -0.46
CHCHD3-202ENST00000423635 SPATA2Q9UM82 520 aa12.19□□□□□ -0.46
CHCHD3-202ENST00000423635 A0A075B6Q4 140 aa12.18□□□□□ -0.46
CHCHD3-202ENST00000423635 IGKV1D-13A0A0B4J2D9 117 aa12.18□□□□□ -0.46
CHCHD3-202ENST00000423635 C15orf62A8K5M9 175 aa12.18□□□□□ -0.46
CHCHD3-202ENST00000423635 MRPS14O60783 128 aaKnown RBP12.18□□□□□ -0.46
CHCHD3-202ENST00000423635 IGKV1-13P0DP09 117 aa12.18□□□□□ -0.46
CHCHD3-202ENST00000423635 DTYMKP23919 212 aa12.18□□□□□ -0.46
CHCHD3-202ENST00000423635 TMEM187Q14656 261 aa12.18□□□□□ -0.46
CHCHD3-202ENST00000423635 LIPKQ5VXJ0 399 aa12.18□□□□□ -0.46
CHCHD3-202ENST00000423635 NR2C2APQ86WQ0 139 aa12.18□□□□□ -0.46
CHCHD3-202ENST00000423635 C8orf59Q8N0T1 100 aaPredicted RBP12.18□□□□□ -0.46
CHCHD3-202ENST00000423635 RNF2Q99496 336 aa12.18□□□□□ -0.46
CHCHD3-202ENST00000423635 CHRDL1Q9BU40 450 aa12.18□□□□□ -0.46
CHCHD3-202ENST00000423635 C20orf24Q9BUV8 137 aa12.18□□□□□ -0.46
CHCHD3-202ENST00000423635 HSPG2P98160 4391 aa12.18□□□□□ -0.46
CHCHD3-202ENST00000423635 IGHV4-4A0A075B6R2 117 aa12.17□□□□□ -0.46
CHCHD3-202ENST00000423635 GNAO1P09471 354 aa12.17□□□□□ -0.46
CHCHD3-202ENST00000423635 TRAM1Q15629 374 aa12.17□□□□□ -0.46
CHCHD3-202ENST00000423635 TIMM50Q3ZCQ8 353 aa12.17□□□□□ -0.46
CHCHD3-202ENST00000423635 Q8NAQ8 132 aa12.17□□□□□ -0.46
CHCHD3-202ENST00000423635 UFD1Q92890 307 aa12.17□□□□□ -0.46
CHCHD3-202ENST00000423635 C8orf4Q9NR00 106 aa12.17□□□□□ -0.46
CHCHD3-202ENST00000423635 C15orf61A6NNL5 157 aa12.16□□□□□ -0.46
CHCHD3-202ENST00000423635 F8W735 103 aaPredicted RBP12.16□□□□□ -0.46
CHCHD3-202ENST00000423635 CHEK1O14757 476 aa12.16□□□□□ -0.46
CHCHD3-202ENST00000423635 CYB5BO43169 146 aa12.16□□□□□ -0.46
CHCHD3-202ENST00000423635 CA1P00915 261 aaPredicted RBP12.16□□□□□ -0.46
CHCHD3-202ENST00000423635 FGF2P09038 288 aa12.16□□□□□ -0.46
CHCHD3-202ENST00000423635 RAB6AP20340 208 aa12.16□□□□□ -0.46
CHCHD3-202ENST00000423635 HES5Q5TA89 166 aa12.16□□□□□ -0.46
CHCHD3-202ENST00000423635 FAM90A2PQ658T7 463 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms