RNA–Protein interactions for RNA: ENST00000423061.5

SYNE1-212, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE1, Length 27,436 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-212ENST00000423061 OR2H2O95918 312 aa2.9□□□□□ -1.94
SYNE1-212ENST00000423061 RPL15P61313 204 aaKnown RBP2.9□□□□□ -1.94
SYNE1-212ENST00000423061 RPL18Q07020 188 aaKnown RBP2.9□□□□□ -1.94
SYNE1-212ENST00000423061 TMEM25Q86YD3 366 aa2.9□□□□□ -1.94
SYNE1-212ENST00000423061 FER1L6-AS2Q96M78 137 aa2.9□□□□□ -1.94
SYNE1-212ENST00000423061 FAM234AQ9H0X4 552 aa2.9□□□□□ -1.94
SYNE1-212ENST00000423061 TSACCQ96A04 125 aaPredicted RBP2.9□□□□□ -1.94
SYNE1-212ENST00000423061 IL36BQ9NZH7 164 aa2.9□□□□□ -1.94
SYNE1-212ENST00000423061 SCO2A0A1W2PP80 73 aa2.9□□□□□ -1.94
SYNE1-212ENST00000423061 DGAT2L6Q6ZPD8 337 aa2.9□□□□□ -1.94
SYNE1-212ENST00000423061 PTPRZ1P23471 2315 aaPredicted RBP2.9□□□□□ -1.94
SYNE1-212ENST00000423061 PRSS37A4D1T9 235 aa2.9□□□□□ -1.95
SYNE1-212ENST00000423061 SPATA12Q7Z6I5 190 aa2.9□□□□□ -1.95
SYNE1-212ENST00000423061 FLYWCH2Q96CP2 140 aaKnown RBP2.9□□□□□ -1.95
SYNE1-212ENST00000423061 DECR2Q9NUI1 292 aa2.9□□□□□ -1.95
SYNE1-212ENST00000423061 LINC01465Q8N7H1 131 aa2.9□□□□□ -1.95
SYNE1-212ENST00000423061 Q1RN00 199 aa2.9□□□□□ -1.95
SYNE1-212ENST00000423061 COLCA1Q6ZS62 124 aa2.9□□□□□ -1.95
SYNE1-212ENST00000423061 TMEM147Q9BVK8 224 aa2.9□□□□□ -1.95
SYNE1-212ENST00000423061 IGF2-ASQ6U949 168 aa2.9□□□□□ -1.95
SYNE1-212ENST00000423061 MKXQ8IYA7 352 aa2.9□□□□□ -1.95
SYNE1-212ENST00000423061 EAF1Q96JC9 268 aaPredicted RBP2.9□□□□□ -1.95
SYNE1-212ENST00000423061 GPR82Q96P67 336 aa2.9□□□□□ -1.95
SYNE1-212ENST00000423061 SCN10AQ9Y5Y9 1956 aa2.9□□□□□ -1.95
SYNE1-212ENST00000423061 TRAV38-1A0A0B4J264 116 aa2.9□□□□□ -1.95
SYNE1-212ENST00000423061 VDAC2P45880 294 aaPredicted RBP2.9□□□□□ -1.95
SYNE1-212ENST00000423061 HCFC2Q9Y5Z7 792 aa2.9□□□□□ -1.95
SYNE1-212ENST00000423061 H3BMG7 143 aa2.9□□□□□ -1.95
SYNE1-212ENST00000423061 MIC13Q5XKP0 118 aa2.9□□□□□ -1.95
SYNE1-212ENST00000423061 CENPVQ7Z7K6 275 aaPredicted RBP2.9□□□□□ -1.95
SYNE1-212ENST00000423061 FRG2CA6NGY1 282 aa2.9□□□□□ -1.95
SYNE1-212ENST00000423061 FOLR3P41439 243 aa2.9□□□□□ -1.95
SYNE1-212ENST00000423061 ST8SIA1Q92185 356 aa2.9□□□□□ -1.95
SYNE1-212ENST00000423061 SGK494Q96LW2 274 aa2.9□□□□□ -1.95
SYNE1-212ENST00000423061 OR2V2Q96R30 315 aa2.9□□□□□ -1.95
SYNE1-212ENST00000423061 AGMATQ9BSE5 352 aa2.9□□□□□ -1.95
SYNE1-212ENST00000423061 TMUB1Q9BVT8 246 aa2.9□□□□□ -1.95
SYNE1-212ENST00000423061 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.9□□□□□ -1.95
SYNE1-212ENST00000423061 JPT1Q9UK76 154 aa2.9□□□□□ -1.95
SYNE1-212ENST00000423061 TIAF1O95411 115 aa2.9□□□□□ -1.95
SYNE1-212ENST00000423061 OCC1Q8TAD7 63 aa2.9□□□□□ -1.95
SYNE1-212ENST00000423061 SMIM17P0DL12 118 aa2.9□□□□□ -1.95
SYNE1-212ENST00000423061 PMVKQ15126 192 aa2.9□□□□□ -1.95
SYNE1-212ENST00000423061 ZNF414Q96IQ9 312 aa2.9□□□□□ -1.95
SYNE1-212ENST00000423061 SYS1-DBNDD2H3BUS1 97 aa2.9□□□□□ -1.95
SYNE1-212ENST00000423061 GABRG2P18507 467 aa2.9□□□□□ -1.95
SYNE1-212ENST00000423061 TMEM155Q4W5P6 130 aa2.9□□□□□ -1.95
SYNE1-212ENST00000423061 DOCK9Q9BZ29 2069 aa2.9□□□□□ -1.95
SYNE1-212ENST00000423061 A0A1W2PQM1 296 aa2.9□□□□□ -1.95
SYNE1-212ENST00000423061 LEPROTL1O95214 131 aa2.9□□□□□ -1.95
SYNE1-212ENST00000423061 SPINT2O43291 252 aa2.9□□□□□ -1.95
SYNE1-212ENST00000423061 CRYGCP07315 174 aa2.9□□□□□ -1.95
SYNE1-212ENST00000423061 YPEL1O60688 119 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 CRYBB3P26998 211 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 GJC3Q8NFK1 279 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 YPEL2Q96QA6 119 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 ZNF138P52744 262 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 GAPTQ8N292 157 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 OR8B8Q15620 311 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 SPRY1O43609 319 aaPredicted RBP2.89□□□□□ -1.95
SYNE1-212ENST00000423061 ARL16Q0P5N6 197 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 TBC1D26Q86UD7 250 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 LSM10Q969L4 123 aaKnown RBP2.89□□□□□ -1.95
SYNE1-212ENST00000423061 TRPM7Q96QT4 1865 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 CD24P25063 80 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 FABP5P3A8MUU1 101 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 UPK3AO75631 287 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 CACNA1GO43497 2377 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 COL4A1P02462 1669 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 CXorf51AA0A1B0GTR3 108 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 STARD5Q9NSY2 213 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 COX7A2P2O60397 106 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 OR1D5P58170 312 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 SSBP2P81877 361 aaPredicted RBP2.89□□□□□ -1.95
SYNE1-212ENST00000423061 Q6ZNB5 142 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 PRSS41Q7RTY9 318 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 SSMEM1Q8WWF3 244 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 RNF125Q96EQ8 232 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 DUX5Q96PT3 197 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 TRIOBPQ9H2D6 2365 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 OTOSQ8NHW6 89 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 ZNF391Q9UJN7 358 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 NOTCH3Q9UM47 2321 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 IGLV3-16A0A075B6K0 115 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 DPTQ07507 201 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 WFDC5Q8TCV5 224 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 SAP30LQ9HAJ7 183 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 FRMPD3Q5JV73 1810 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 SLC23A3Q6PIS1 610 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 PPDPFLQ8WWR9 84 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 C18orf12Q96KH6 178 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 TRAV8-2A0A0B4J237 113 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 ATP5LO75964 103 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 RTL8AQ9BWD3 113 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 ARL14EPLP0DKL9 152 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 GNB1P62873 340 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 SPATA46Q5T0L3 261 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 COMMD5Q9GZQ3 224 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 RNF114Q9Y508 228 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 CXorf1O96002 111 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms