RNA–Protein interactions for RNA: ENST00000421870.1

LINC01840-201, Transcript of long intergenic non-protein coding RNA 1840, humanhuman

TSL 4 BASIC

Gene LINC01840, Length 571 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01840-201ENST00000421870 CTRB2Q6GPI1 263 aa11.35□□□□□ -0.59
LINC01840-201ENST00000421870 IL34Q6ZMJ4 242 aa11.35□□□□□ -0.59
LINC01840-201ENST00000421870 CLVS1Q8IUQ0 354 aaPredicted RBP11.35□□□□□ -0.59
LINC01840-201ENST00000421870 RAB2BQ8WUD1 216 aa11.35□□□□□ -0.59
LINC01840-201ENST00000421870 FCAMRQ8WWV6 532 aa11.35□□□□□ -0.59
LINC01840-201ENST00000421870 FANCD2OSQ96PS1 177 aa11.35□□□□□ -0.59
LINC01840-201ENST00000421870 FYTTD1Q96QD9 318 aaKnown RBP11.35□□□□□ -0.59
LINC01840-201ENST00000421870 OR4C12Q96R67 309 aa11.35□□□□□ -0.59
LINC01840-201ENST00000421870 HRASLSQ9HDD0 168 aa11.35□□□□□ -0.59
LINC01840-201ENST00000421870 MTFP1Q9UDX5 166 aa11.35□□□□□ -0.59
LINC01840-201ENST00000421870 DMRT1Q9Y5R6 373 aa11.35□□□□□ -0.59
LINC01840-201ENST00000421870 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.34□□□□□ -0.59
LINC01840-201ENST00000421870 CTDSP2O14595 271 aa11.34□□□□□ -0.59
LINC01840-201ENST00000421870 MYOD1P15172 320 aa11.34□□□□□ -0.59
LINC01840-201ENST00000421870 LPAR6P43657 344 aa11.34□□□□□ -0.59
LINC01840-201ENST00000421870 RPL5P46777 297 aaKnown RBP11.34□□□□□ -0.59
LINC01840-201ENST00000421870 OR9G4Q8NGQ1 327 aa11.34□□□□□ -0.59
LINC01840-201ENST00000421870 OR6Q1Q8NGQ2 317 aa11.34□□□□□ -0.59
LINC01840-201ENST00000421870 OR52I2Q8NH67 350 aa11.34□□□□□ -0.59
LINC01840-201ENST00000421870 DYNC2LI1Q8TCX1 351 aa11.34□□□□□ -0.59
LINC01840-201ENST00000421870 SRSF8Q9BRL6 282 aaKnown RBP11.34□□□□□ -0.59
LINC01840-201ENST00000421870 ELOVL1Q9BW60 279 aa11.34□□□□□ -0.59
LINC01840-201ENST00000421870 TMEM140Q9NV12 185 aa11.34□□□□□ -0.59
LINC01840-201ENST00000421870 OR2J3O76001 311 aa11.33□□□□□ -0.6
LINC01840-201ENST00000421870 IGLV1-51P01701 117 aa11.33□□□□□ -0.6
LINC01840-201ENST00000421870 AREGP15514 252 aa11.33□□□□□ -0.6
LINC01840-201ENST00000421870 SPNP16150 400 aa11.33□□□□□ -0.6
LINC01840-201ENST00000421870 TATDN3Q17R31 274 aa11.33□□□□□ -0.6
LINC01840-201ENST00000421870 C15orf32Q32M92 178 aa11.33□□□□□ -0.6
LINC01840-201ENST00000421870 FAM209BQ5JX69 171 aa11.33□□□□□ -0.6
LINC01840-201ENST00000421870 LHFPL1Q86WI0 220 aa11.33□□□□□ -0.6
LINC01840-201ENST00000421870 DMBX1Q8NFW5 382 aa11.33□□□□□ -0.6
LINC01840-201ENST00000421870 SIGLEC8Q9NYZ4 499 aa11.33□□□□□ -0.6
LINC01840-201ENST00000421870 TEX50A0A1B0GTY4 177 aa11.32□□□□□ -0.6
LINC01840-201ENST00000421870 IGLC7A0M8Q6 106 aa11.32□□□□□ -0.6
LINC01840-201ENST00000421870 DPPA5A6NC42 116 aa11.32□□□□□ -0.6
LINC01840-201ENST00000421870 MARCH11A6NNE9 402 aa11.32□□□□□ -0.6
LINC01840-201ENST00000421870 GABARAPH6UMI1 98 aa11.32□□□□□ -0.6
LINC01840-201ENST00000421870 M0QYG6 137 aa11.32□□□□□ -0.6
LINC01840-201ENST00000421870 RGS5O15539 181 aa11.32□□□□□ -0.6
LINC01840-201ENST00000421870 DHFRP00374 187 aa11.32□□□□□ -0.6
LINC01840-201ENST00000421870 KRASP01116 189 aa11.32□□□□□ -0.6
LINC01840-201ENST00000421870 CD3DP04234 171 aa11.32□□□□□ -0.6
LINC01840-201ENST00000421870 TBPP20226 339 aa11.32□□□□□ -0.6
LINC01840-201ENST00000421870 PTBP1P26599 531 aaKnown RBP eCLIP11.32□□□□□ -0.6
LINC01840-201ENST00000421870 SYNJ2BPP57105 145 aa11.32□□□□□ -0.6
LINC01840-201ENST00000421870 CD69Q07108 199 aa11.32□□□□□ -0.6
LINC01840-201ENST00000421870 PHLDA2Q53GA4 152 aa11.32□□□□□ -0.6
LINC01840-201ENST00000421870 C19orf35Q6ZS72 473 aa11.32□□□□□ -0.6
LINC01840-201ENST00000421870 LAX1Q8IWV1 398 aa11.32□□□□□ -0.6
LINC01840-201ENST00000421870 SLC38A6Q8IZM9 456 aa11.32□□□□□ -0.6
LINC01840-201ENST00000421870 ARRDC1Q8N5I2 433 aa11.32□□□□□ -0.6
LINC01840-201ENST00000421870 COMMD5Q9GZQ3 224 aa11.32□□□□□ -0.6
LINC01840-201ENST00000421870 FBXL7Q9UJT9 491 aa11.32□□□□□ -0.6
LINC01840-201ENST00000421870 IGLV11-55A0A075B6I3 123 aa11.31□□□□□ -0.6
LINC01840-201ENST00000421870 BMPR1BO00238 502 aa11.31□□□□□ -0.6
LINC01840-201ENST00000421870 NDUFB8O95169 186 aa11.31□□□□□ -0.6
LINC01840-201ENST00000421870 IFNA6P05013 189 aa11.31□□□□□ -0.6
LINC01840-201ENST00000421870 CSN3P07498 182 aa11.31□□□□□ -0.6
LINC01840-201ENST00000421870 GP9P14770 177 aa11.31□□□□□ -0.6
LINC01840-201ENST00000421870 HIST1H1BP16401 226 aaKnown RBP11.31□□□□□ -0.6
LINC01840-201ENST00000421870 S100GP29377 79 aa11.31□□□□□ -0.6
LINC01840-201ENST00000421870 MECP2P51608 486 aaKnown RBP11.31□□□□□ -0.6
LINC01840-201ENST00000421870 ERVK-16P61578 105 aa11.31□□□□□ -0.6
LINC01840-201ENST00000421870 SSBP1Q04837 148 aaKnown RBP11.31□□□□□ -0.6
LINC01840-201ENST00000421870 EXOSC2Q13868 293 aaKnown RBP11.31□□□□□ -0.6
LINC01840-201ENST00000421870 RPEL1Q2QD12 228 aa11.31□□□□□ -0.6
LINC01840-201ENST00000421870 RNASE10Q5GAN6 216 aaKnown RBP11.31□□□□□ -0.6
LINC01840-201ENST00000421870 TBC1D26Q86UD7 250 aa11.31□□□□□ -0.6
LINC01840-201ENST00000421870 TMEM229BQ8NBD8 167 aa11.31□□□□□ -0.6
LINC01840-201ENST00000421870 QTRT1Q9BXR0 403 aaKnown RBP11.31□□□□□ -0.6
LINC01840-201ENST00000421870 CCDC59Q9P031 241 aaKnown RBP11.31□□□□□ -0.6
LINC01840-201ENST00000421870 CTDSPLO15194 276 aa11.3□□□□□ -0.6
LINC01840-201ENST00000421870 LY86O95711 162 aa11.3□□□□□ -0.6
LINC01840-201ENST00000421870 CD74P04233 296 aa11.3□□□□□ -0.6
LINC01840-201ENST00000421870 REG1AP05451 166 aa11.3□□□□□ -0.6
LINC01840-201ENST00000421870 NHLRC4P0CG21 123 aaPredicted RBP11.3□□□□□ -0.6
LINC01840-201ENST00000421870 TRAPPC2P0DI81 140 aa11.3□□□□□ -0.6
LINC01840-201ENST00000421870 TRAPPC2BP0DI82 140 aa11.3□□□□□ -0.6
LINC01840-201ENST00000421870 RPA2P15927 270 aa11.3□□□□□ -0.6
LINC01840-201ENST00000421870 G6PCP35575 357 aa11.3□□□□□ -0.6
LINC01840-201ENST00000421870 RND3P61587 244 aa11.3□□□□□ -0.6
LINC01840-201ENST00000421870 MRPS10P82664 201 aaKnown RBP11.3□□□□□ -0.6
LINC01840-201ENST00000421870 RNASE12Q5GAN4 147 aaKnown RBP11.3□□□□□ -0.6
LINC01840-201ENST00000421870 THOC7Q6I9Y2 204 aaKnown RBP11.3□□□□□ -0.6
LINC01840-201ENST00000421870 HSD17B13Q7Z5P4 300 aaPredicted RBP11.3□□□□□ -0.6
LINC01840-201ENST00000421870 OR10W1Q8NGF6 305 aa11.3□□□□□ -0.6
LINC01840-201ENST00000421870 OR1L8Q8NGR8 309 aa11.3□□□□□ -0.6
LINC01840-201ENST00000421870 ZNF486Q96H40 463 aaPredicted RBP11.3□□□□□ -0.6
LINC01840-201ENST00000421870 SLIRPQ9GZT3 109 aaKnown RBP11.3□□□□□ -0.6
LINC01840-201ENST00000421870 NDUFA4L2Q9NRX3 87 aa11.3□□□□□ -0.6
LINC01840-201ENST00000421870 GGCTO75223 188 aaKnown RBP11.29□□□□□ -0.6
LINC01840-201ENST00000421870 IGKV1-39P01597 117 aa11.29□□□□□ -0.6
LINC01840-201ENST00000421870 IGKV1D-39P04432 117 aa11.29□□□□□ -0.6
LINC01840-201ENST00000421870 SERPINE2P07093 398 aa11.29□□□□□ -0.6
LINC01840-201ENST00000421870 DEFA4P12838 97 aa11.29□□□□□ -0.6
LINC01840-201ENST00000421870 TAS2R19P59542 299 aa11.29□□□□□ -0.6
LINC01840-201ENST00000421870 GPHB5Q86YW7 130 aa11.29□□□□□ -0.6
LINC01840-201ENST00000421870 TERB2Q8NHR7 220 aa11.29□□□□□ -0.6
LINC01840-201ENST00000421870 SEC22AQ96IW7 307 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms