RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 HMX3A6NHT5 357 aa12.29□□□□□ -0.44
BRAT1-202ENST00000421712 CENPXA8MT69 81 aa12.29□□□□□ -0.44
BRAT1-202ENST00000421712 TRGV3P03979 118 aa12.29□□□□□ -0.44
BRAT1-202ENST00000421712 MYOD1P15172 320 aa12.29□□□□□ -0.44
BRAT1-202ENST00000421712 AKR1C4P17516 323 aa12.29□□□□□ -0.44
BRAT1-202ENST00000421712 CDX1P47902 265 aaPredicted RBP12.29□□□□□ -0.44
BRAT1-202ENST00000421712 SGPP2Q8IWX5 399 aa12.29□□□□□ -0.44
BRAT1-202ENST00000421712 RNASE11Q8TAA1 199 aaKnown RBP12.29□□□□□ -0.44
BRAT1-202ENST00000421712 S100ZQ8WXG8 99 aa12.29□□□□□ -0.44
BRAT1-202ENST00000421712 OR5B12Q96R08 314 aa12.29□□□□□ -0.44
BRAT1-202ENST00000421712 SDHCQ99643 169 aaPredicted RBP12.29□□□□□ -0.44
BRAT1-202ENST00000421712 NAA60Q9H7X0 242 aa12.29□□□□□ -0.44
BRAT1-202ENST00000421712 VSIG4Q9Y279 399 aa12.29□□□□□ -0.44
BRAT1-202ENST00000421712 NSG2Q9Y328 171 aa12.29□□□□□ -0.44
BRAT1-202ENST00000421712 RBMXL2O75526 392 aaKnown RBP12.28□□□□□ -0.44
BRAT1-202ENST00000421712 B3GALNT1O75752 331 aa12.28□□□□□ -0.44
BRAT1-202ENST00000421712 ATG12O94817 140 aa12.28□□□□□ -0.44
BRAT1-202ENST00000421712 OR5AC1P0C628 307 aa12.28□□□□□ -0.44
BRAT1-202ENST00000421712 OR9G9P0C7N8 305 aa12.28□□□□□ -0.44
BRAT1-202ENST00000421712 IL7P13232 177 aa12.28□□□□□ -0.44
BRAT1-202ENST00000421712 SLC6A1P30531 599 aa12.28□□□□□ -0.44
BRAT1-202ENST00000421712 AKR1C2P52895 323 aa12.28□□□□□ -0.44
BRAT1-202ENST00000421712 ASPHD1Q5U4P2 390 aa12.28□□□□□ -0.44
BRAT1-202ENST00000421712 LINC00299Q6ZSB3 139 aa12.28□□□□□ -0.44
BRAT1-202ENST00000421712 TMED4Q7Z7H5 227 aa12.28□□□□□ -0.44
BRAT1-202ENST00000421712 SLC25A42Q86VD7 318 aa12.28□□□□□ -0.44
BRAT1-202ENST00000421712 ZNF491Q8N8L2 437 aa12.28□□□□□ -0.44
BRAT1-202ENST00000421712 ADAD2Q8NCV1 583 aaKnown RBP12.28□□□□□ -0.44
BRAT1-202ENST00000421712 OR4A16Q8NH70 328 aa12.28□□□□□ -0.44
BRAT1-202ENST00000421712 UBE2E2Q96LR5 201 aa12.28□□□□□ -0.44
BRAT1-202ENST00000421712 TSC22D3Q99576 134 aa12.28□□□□□ -0.44
BRAT1-202ENST00000421712 HINT2Q9BX68 163 aa12.28□□□□□ -0.44
BRAT1-202ENST00000421712 SLA2Q9H6Q3 261 aa12.28□□□□□ -0.44
BRAT1-202ENST00000421712 AKIP1Q9NQ31 210 aa12.28□□□□□ -0.44
BRAT1-202ENST00000421712 KCNIP3Q9Y2W7 256 aa12.28□□□□□ -0.44
BRAT1-202ENST00000421712 NAP1L6A6NFF2 107 aa12.27□□□□□ -0.45
BRAT1-202ENST00000421712 CRYM-AS1A6NIL9 109 aa12.27□□□□□ -0.45
BRAT1-202ENST00000421712 IGKV1-39P01597 117 aa12.27□□□□□ -0.45
BRAT1-202ENST00000421712 IGKV1D-39P04432 117 aa12.27□□□□□ -0.45
BRAT1-202ENST00000421712 IL6RP08887 468 aaPredicted RBP12.27□□□□□ -0.45
BRAT1-202ENST00000421712 RAB25P57735 213 aa12.27□□□□□ -0.45
BRAT1-202ENST00000421712 OR2B8PP59922 312 aa12.27□□□□□ -0.45
BRAT1-202ENST00000421712 DHODHQ02127 395 aa12.27□□□□□ -0.45
BRAT1-202ENST00000421712 C4orf3Q8WVX3 66 aa12.27□□□□□ -0.45
BRAT1-202ENST00000421712 SEC22AQ96IW7 307 aa12.27□□□□□ -0.45
BRAT1-202ENST00000421712 DUX3Q96PT4 197 aa12.27□□□□□ -0.45
BRAT1-202ENST00000421712 SLC25A21Q9BQT8 299 aaPredicted RBP12.27□□□□□ -0.45
BRAT1-202ENST00000421712 GNB4Q9HAV0 340 aa12.27□□□□□ -0.45
BRAT1-202ENST00000421712 FKBP11Q9NYL4 201 aa12.27□□□□□ -0.45
BRAT1-202ENST00000421712 PRNDQ9UKY0 176 aa12.27□□□□□ -0.45
BRAT1-202ENST00000421712 OR51B2Q9Y5P1 312 aa12.27□□□□□ -0.45
BRAT1-202ENST00000421712 C13orf42A0A1B0GVH6 325 aa12.26□□□□□ -0.45
BRAT1-202ENST00000421712 E7EUB6 86 aa12.26□□□□□ -0.45
BRAT1-202ENST00000421712 H3BUA1 57 aa12.26□□□□□ -0.45
BRAT1-202ENST00000421712 CCL24O00175 119 aa12.26□□□□□ -0.45
BRAT1-202ENST00000421712 IGHV3-11P01762 117 aa12.26□□□□□ -0.45
BRAT1-202ENST00000421712 TRAPPC2P0DI81 140 aa12.26□□□□□ -0.45
BRAT1-202ENST00000421712 TRAPPC2BP0DI82 140 aa12.26□□□□□ -0.45
BRAT1-202ENST00000421712 CD33P20138 364 aa12.26□□□□□ -0.45
BRAT1-202ENST00000421712 UCP1P25874 307 aa12.26□□□□□ -0.45
BRAT1-202ENST00000421712 CCR6P51684 374 aa12.26□□□□□ -0.45
BRAT1-202ENST00000421712 KIAA0141Q14154 515 aaPredicted RBP12.26□□□□□ -0.45
BRAT1-202ENST00000421712 DEFB136Q30KP8 78 aa12.26□□□□□ -0.45
BRAT1-202ENST00000421712 OR1L8Q8NGR8 309 aa12.26□□□□□ -0.45
BRAT1-202ENST00000421712 RRNAD1Q96FB5 475 aaKnown RBP12.26□□□□□ -0.45
BRAT1-202ENST00000421712 TRRAPQ9Y4A5 3859 aa12.26□□□□□ -0.45
BRAT1-202ENST00000421712 A0A0G2JLM5 398 aa12.25□□□□□ -0.45
BRAT1-202ENST00000421712 TEX50A0A1B0GTY4 177 aa12.25□□□□□ -0.45
BRAT1-202ENST00000421712 TEX22C9J3V5 150 aa12.25□□□□□ -0.45
BRAT1-202ENST00000421712 PRH1P02810 166 aa12.25□□□□□ -0.45
BRAT1-202ENST00000421712 REG1AP05451 166 aa12.25□□□□□ -0.45
BRAT1-202ENST00000421712 ANXA3P12429 323 aa12.25□□□□□ -0.45
BRAT1-202ENST00000421712 DEFA4P12838 97 aa12.25□□□□□ -0.45
BRAT1-202ENST00000421712 MYCNOSP40205 109 aa12.25□□□□□ -0.45
BRAT1-202ENST00000421712 MECP2P51608 486 aaKnown RBP12.25□□□□□ -0.45
BRAT1-202ENST00000421712 RBMS2Q15434 407 aaKnown RBP12.25□□□□□ -0.45
BRAT1-202ENST00000421712 CADM3Q8N126 398 aa12.25□□□□□ -0.45
BRAT1-202ENST00000421712 TTC9CQ8N5M4 171 aa12.25□□□□□ -0.45
BRAT1-202ENST00000421712 MYOZ3Q8TDC0 251 aa12.25□□□□□ -0.45
BRAT1-202ENST00000421712 DPF1Q92782 380 aa12.25□□□□□ -0.45
BRAT1-202ENST00000421712 QTRT1Q9BXR0 403 aaKnown RBP12.25□□□□□ -0.45
BRAT1-202ENST00000421712 TMEM222Q9H0R3 208 aa12.25□□□□□ -0.45
BRAT1-202ENST00000421712 DHFRP00374 187 aa12.24□□□□□ -0.45
BRAT1-202ENST00000421712 FGF2P09038 288 aa12.24□□□□□ -0.45
BRAT1-202ENST00000421712 AREGP15514 252 aa12.24□□□□□ -0.45
BRAT1-202ENST00000421712 ZNF846Q147U1 533 aa12.24□□□□□ -0.45
BRAT1-202ENST00000421712 IZUMO4Q1ZYL8 232 aa12.24□□□□□ -0.45
BRAT1-202ENST00000421712 TMEM268Q5VZI3 342 aa12.24□□□□□ -0.45
BRAT1-202ENST00000421712 OR11H1Q8NG94 326 aa12.24□□□□□ -0.45
BRAT1-202ENST00000421712 GLYATL2Q8WU03 294 aa12.24□□□□□ -0.45
BRAT1-202ENST00000421712 TMEM230Q96A57 120 aa12.24□□□□□ -0.45
BRAT1-202ENST00000421712 RAX2Q96IS3 184 aa12.24□□□□□ -0.45
BRAT1-202ENST00000421712 C7orf50Q9BRJ6 194 aaKnown RBP12.24□□□□□ -0.45
BRAT1-202ENST00000421712 CCDC32Q9BV29 185 aa12.24□□□□□ -0.45
BRAT1-202ENST00000421712 WDR12Q9GZL7 423 aaKnown RBP12.24□□□□□ -0.45
BRAT1-202ENST00000421712 ZNF257Q9Y2Q1 563 aa12.24□□□□□ -0.45
BRAT1-202ENST00000421712 A0A1B0GW64 132 aa12.23□□□□□ -0.45
BRAT1-202ENST00000421712 C15orf61A6NNL5 157 aa12.23□□□□□ -0.45
BRAT1-202ENST00000421712 CDS2O95674 445 aa12.23□□□□□ -0.45
BRAT1-202ENST00000421712 IGKV1-5P01602 117 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms