RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 MINOS1-NBL1R4GNA1 71 aa9.01□□□□□ -0.97
PTCH1-206ENST00000421141 NSUN5P1Q3KNT7 163 aa9.01□□□□□ -0.97
PTCH1-206ENST00000421141 HLA-DQB1P01920 261 aa9.01□□□□□ -0.97
PTCH1-206ENST00000421141 UNC119Q13432 240 aa9.01□□□□□ -0.97
PTCH1-206ENST00000421141 TMEM177Q53S58 311 aa9.01□□□□□ -0.97
PTCH1-206ENST00000421141 ZNF525Q8N782 197 aa9.01□□□□□ -0.97
PTCH1-206ENST00000421141 NEURL2Q9BR09 285 aa9.01□□□□□ -0.97
PTCH1-206ENST00000421141 RBFOX3A6NFN3 312 aa9□□□□□ -0.97
PTCH1-206ENST00000421141 MFNGO00587 321 aa9□□□□□ -0.97
PTCH1-206ENST00000421141 SLC16A13Q7RTY0 426 aa9□□□□□ -0.97
PTCH1-206ENST00000421141 C19orf24Q9BVV8 132 aa9□□□□□ -0.97
PTCH1-206ENST00000421141 PRO3102Q9H379 93 aa9□□□□□ -0.97
PTCH1-206ENST00000421141 CCL3L1P16619 93 aa9□□□□□ -0.97
PTCH1-206ENST00000421141 TCF19Q9Y242 345 aa9□□□□□ -0.97
PTCH1-206ENST00000421141 C1QL2Q7Z5L3 287 aa9□□□□□ -0.97
PTCH1-206ENST00000421141 FAM210BQ96KR6 192 aa9□□□□□ -0.97
PTCH1-206ENST00000421141 MRPL20Q9BYC9 149 aaKnown RBP9□□□□□ -0.97
PTCH1-206ENST00000421141 LYRM2Q9NU23 88 aaPredicted RBP9□□□□□ -0.97
PTCH1-206ENST00000421141 ZNF586Q9NXT0 402 aa9□□□□□ -0.97
PTCH1-206ENST00000421141 AP4M1O00189 453 aa9□□□□□ -0.97
PTCH1-206ENST00000421141 SIAH2O43255 324 aa9□□□□□ -0.97
PTCH1-206ENST00000421141 KBTBD11O94819 623 aa9□□□□□ -0.97
PTCH1-206ENST00000421141 RNF212Q495C1 297 aa9□□□□□ -0.97
PTCH1-206ENST00000421141 IL36RNQ9UBH0 155 aa9□□□□□ -0.97
PTCH1-206ENST00000421141 EML5Q05BV3 1969 aa9□□□□□ -0.97
PTCH1-206ENST00000421141 ZNF250P15622 560 aa9□□□□□ -0.97
PTCH1-206ENST00000421141 CCL1P22362 96 aa9□□□□□ -0.97
PTCH1-206ENST00000421141 WDR73Q6P4I2 378 aa9□□□□□ -0.97
PTCH1-206ENST00000421141 SOSTQ9BQB4 213 aa9□□□□□ -0.97
PTCH1-206ENST00000421141 YTHDF2Q9Y5A9 579 aaKnown RBP9□□□□□ -0.97
PTCH1-206ENST00000421141 PSMB11A5LHX3 300 aa8.99□□□□□ -0.97
PTCH1-206ENST00000421141 WISP1O95388 367 aa8.99□□□□□ -0.97
PTCH1-206ENST00000421141 IL4P05112 153 aa8.99□□□□□ -0.97
PTCH1-206ENST00000421141 OR51G1Q8NGK1 321 aa8.99□□□□□ -0.97
PTCH1-206ENST00000421141 PRSS3P2Q8NHM4 247 aa8.99□□□□□ -0.97
PTCH1-206ENST00000421141 ANAPC16Q96DE5 110 aa8.99□□□□□ -0.97
PTCH1-206ENST00000421141 BPESC1Q9GZL8 116 aa8.99□□□□□ -0.97
PTCH1-206ENST00000421141 TRAPPC1Q9Y5R8 145 aa8.99□□□□□ -0.97
PTCH1-206ENST00000421141 LOC102723971A0A1B0GUV8 181 aa8.99□□□□□ -0.97
PTCH1-206ENST00000421141 PHLDA3Q9Y5J5 127 aa8.99□□□□□ -0.97
PTCH1-206ENST00000421141 RNF223E7ERA6 249 aa8.99□□□□□ -0.97
PTCH1-206ENST00000421141 TDGF1P13385 188 aa8.99□□□□□ -0.97
PTCH1-206ENST00000421141 BATFQ16520 125 aa8.99□□□□□ -0.97
PTCH1-206ENST00000421141 MOB4Q9Y3A3 225 aa8.99□□□□□ -0.97
PTCH1-206ENST00000421141 TWIST1Q15672 202 aa8.99□□□□□ -0.97
PTCH1-206ENST00000421141 E7EQL1 145 aa8.99□□□□□ -0.97
PTCH1-206ENST00000421141 PIN1P1O15428 100 aa8.99□□□□□ -0.97
PTCH1-206ENST00000421141 EFNA2O43921 213 aa8.99□□□□□ -0.97
PTCH1-206ENST00000421141 LGALSLQ3ZCW2 172 aaPredicted RBP8.99□□□□□ -0.97
PTCH1-206ENST00000421141 NOL4LQ96MY1 436 aaPredicted RBP8.99□□□□□ -0.97
PTCH1-206ENST00000421141 NAT8BQ9UHF3 227 aa8.99□□□□□ -0.97
PTCH1-206ENST00000421141 MSGN1A6NI15 193 aa8.99□□□□□ -0.97
PTCH1-206ENST00000421141 GPR183P32249 361 aa8.99□□□□□ -0.97
PTCH1-206ENST00000421141 EIF4E3Q8N5X7 224 aaKnown RBP8.99□□□□□ -0.97
PTCH1-206ENST00000421141 FGFBP3Q8TAT2 258 aa8.99□□□□□ -0.97
PTCH1-206ENST00000421141 ITLN2Q8WWU7 325 aaPredicted RBP8.99□□□□□ -0.97
PTCH1-206ENST00000421141 SPG11Q96JI7 2443 aa8.99□□□□□ -0.97
PTCH1-206ENST00000421141 SAA2-SAA4A0A096LPE2 208 aa8.98□□□□□ -0.97
PTCH1-206ENST00000421141 SRRM5B3KS81 715 aa8.98□□□□□ -0.97
PTCH1-206ENST00000421141 SAA2P0DJI9 122 aaPredicted RBP8.98□□□□□ -0.97
PTCH1-206ENST00000421141 MORN2Q502X0 79 aa8.98□□□□□ -0.97
PTCH1-206ENST00000421141 H1FOOQ8IZA3 346 aaPredicted RBP8.98□□□□□ -0.97
PTCH1-206ENST00000421141 GPR61Q9BZJ8 451 aa8.98□□□□□ -0.97
PTCH1-206ENST00000421141 RBM38Q9H0Z9 239 aaKnown RBP8.98□□□□□ -0.97
PTCH1-206ENST00000421141 TBL2Q9Y4P3 447 aaKnown RBP8.98□□□□□ -0.97
PTCH1-206ENST00000421141 MED19A0JLT2 244 aaPredicted RBP8.98□□□□□ -0.97
PTCH1-206ENST00000421141 IGKV3-15P01624 115 aa8.98□□□□□ -0.97
PTCH1-206ENST00000421141 GPX1P07203 203 aa8.98□□□□□ -0.97
PTCH1-206ENST00000421141 RPL35P42766 123 aaKnown RBP8.98□□□□□ -0.97
PTCH1-206ENST00000421141 GPHA2Q96T91 129 aa8.98□□□□□ -0.97
PTCH1-206ENST00000421141 C21orf62Q9NYP8 219 aa8.98□□□□□ -0.97
PTCH1-206ENST00000421141 GPR132Q9UNW8 380 aa8.98□□□□□ -0.97
PTCH1-206ENST00000421141 NABP1Q96AH0 204 aa8.98□□□□□ -0.97
PTCH1-206ENST00000421141 ZP3P21754 424 aa8.98□□□□□ -0.97
PTCH1-206ENST00000421141 PNRC1Q12796 327 aaPredicted RBP8.98□□□□□ -0.97
PTCH1-206ENST00000421141 CLEC19AQ6UXS0 136 aa8.98□□□□□ -0.97
PTCH1-206ENST00000421141 NAT8Q9UHE5 227 aa8.98□□□□□ -0.97
PTCH1-206ENST00000421141 A0A1B0GTI1 187 aa8.98□□□□□ -0.97
PTCH1-206ENST00000421141 CD33P20138 364 aa8.98□□□□□ -0.97
PTCH1-206ENST00000421141 IGHV2-26A0A0B4J1V2 119 aa8.98□□□□□ -0.97
PTCH1-206ENST00000421141 RNASEH2CQ8TDP1 164 aaKnown RBP8.98□□□□□ -0.97
PTCH1-206ENST00000421141 C5orf66Q9H5L9 145 aa8.98□□□□□ -0.97
PTCH1-206ENST00000421141 RNF114Q9Y508 228 aa8.98□□□□□ -0.97
PTCH1-206ENST00000421141 IGHV3-23P01764 117 aa8.97□□□□□ -0.97
PTCH1-206ENST00000421141 CAMPP49913 170 aa8.97□□□□□ -0.97
PTCH1-206ENST00000421141 ZP1P60852 638 aa8.97□□□□□ -0.97
PTCH1-206ENST00000421141 F12P00748 615 aaPredicted RBP8.97□□□□□ -0.97
PTCH1-206ENST00000421141 NHLH2Q02577 135 aa8.97□□□□□ -0.97
PTCH1-206ENST00000421141 LYZL4Q96KX0 146 aa8.97□□□□□ -0.97
PTCH1-206ENST00000421141 PLSCR2Q9NRY7 297 aa8.97□□□□□ -0.97
PTCH1-206ENST00000421141 PRB3Q04118 309 aaPredicted RBP8.97□□□□□ -0.97
PTCH1-206ENST00000421141 TMEM155Q4W5P6 130 aa8.97□□□□□ -0.97
PTCH1-206ENST00000421141 WDR25Q64LD2 544 aaPredicted RBP8.97□□□□□ -0.97
PTCH1-206ENST00000421141 TMEM200BQ69YZ2 307 aa8.97□□□□□ -0.97
PTCH1-206ENST00000421141 PQLC2Q6ZP29 291 aa8.97□□□□□ -0.97
PTCH1-206ENST00000421141 SPINK4O60575 86 aa8.97□□□□□ -0.97
PTCH1-206ENST00000421141 MSMBP08118 114 aa8.97□□□□□ -0.97
PTCH1-206ENST00000421141 HKR1P10072 659 aa8.97□□□□□ -0.97
PTCH1-206ENST00000421141 CD69Q07108 199 aa8.97□□□□□ -0.97
PTCH1-206ENST00000421141 C12orf54Q6X4T0 127 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms