RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 A0A0U1RQK1 487 aa11.39□□□□□ -0.59
SHMT1P1-201ENST00000419974 A0A1W2PRD5 423 aa11.39□□□□□ -0.59
SHMT1P1-201ENST00000419974 A0A1W2PRF3 423 aa11.39□□□□□ -0.59
SHMT1P1-201ENST00000419974 A0A1W2PRM7 423 aa11.39□□□□□ -0.59
SHMT1P1-201ENST00000419974 SMLR1H3BR10 107 aa11.39□□□□□ -0.59
SHMT1P1-201ENST00000419974 RRHO14718 337 aa11.39□□□□□ -0.59
SHMT1P1-201ENST00000419974 NBR2O15453 112 aa11.39□□□□□ -0.59
SHMT1P1-201ENST00000419974 CHST1O43916 411 aa11.39□□□□□ -0.59
SHMT1P1-201ENST00000419974 GPR137BO60478 399 aa11.39□□□□□ -0.59
SHMT1P1-201ENST00000419974 TSC22D2O75157 780 aa11.39□□□□□ -0.59
SHMT1P1-201ENST00000419974 EIF2B2P49770 351 aaKnown RBP11.39□□□□□ -0.59
SHMT1P1-201ENST00000419974 POLR2GP62487 172 aaKnown RBP eCLIP11.39□□□□□ -0.59
SHMT1P1-201ENST00000419974 LRRC37A5PQ49AS3 106 aa11.39□□□□□ -0.59
SHMT1P1-201ENST00000419974 BRD3OSQ6XYD6 125 aa11.39□□□□□ -0.59
SHMT1P1-201ENST00000419974 ACOT7LQ6ZUV0 252 aa11.39□□□□□ -0.59
SHMT1P1-201ENST00000419974 C16orf82Q7Z2V1 217 aa11.39□□□□□ -0.59
SHMT1P1-201ENST00000419974 NDUFA4L2Q9NRX3 87 aa11.39□□□□□ -0.59
SHMT1P1-201ENST00000419974 OR5AC2Q9NZP5 309 aa11.39□□□□□ -0.59
SHMT1P1-201ENST00000419974 FAM96BQ9Y3D0 163 aa11.39□□□□□ -0.59
SHMT1P1-201ENST00000419974 ABCA1O95477 2261 aa11.39□□□□□ -0.59
SHMT1P1-201ENST00000419974 WNK2Q9Y3S1 2297 aa11.39□□□□□ -0.59
SHMT1P1-201ENST00000419974 JMJD1CQ15652 2540 aa11.39□□□□□ -0.59
SHMT1P1-201ENST00000419974 TRAV3A0A0B4J244 114 aa11.38□□□□□ -0.59
SHMT1P1-201ENST00000419974 A0A0D9SG52 128 aa11.38□□□□□ -0.59
SHMT1P1-201ENST00000419974 FGF16O43320 207 aa11.38□□□□□ -0.59
SHMT1P1-201ENST00000419974 SLC25A17O43808 307 aa11.38□□□□□ -0.59
SHMT1P1-201ENST00000419974 C4BPBP20851 252 aa11.38□□□□□ -0.59
SHMT1P1-201ENST00000419974 PAX9P55771 341 aa11.38□□□□□ -0.59
SHMT1P1-201ENST00000419974 PRCDQ00LT1 54 aa11.38□□□□□ -0.59
SHMT1P1-201ENST00000419974 LRRC75BQ2VPJ9 315 aa11.38□□□□□ -0.59
SHMT1P1-201ENST00000419974 RUSC1-AS1Q66K80 236 aa11.38□□□□□ -0.59
SHMT1P1-201ENST00000419974 LAMTOR1Q6IAA8 161 aa11.38□□□□□ -0.59
SHMT1P1-201ENST00000419974 SSX9Q7RTT3 188 aa11.38□□□□□ -0.59
SHMT1P1-201ENST00000419974 HSD17B13Q7Z5P4 300 aaPredicted RBP11.38□□□□□ -0.59
SHMT1P1-201ENST00000419974 C9orf62Q8N4C0 152 aa11.38□□□□□ -0.59
SHMT1P1-201ENST00000419974 QTRT1Q9BXR0 403 aaKnown RBP11.38□□□□□ -0.59
SHMT1P1-201ENST00000419974 ZNF430Q9H8G1 570 aaPredicted RBP11.38□□□□□ -0.59
SHMT1P1-201ENST00000419974 LYRM2Q9NU23 88 aaPredicted RBP11.38□□□□□ -0.59
SHMT1P1-201ENST00000419974 OR51B2Q9Y5P1 312 aa11.38□□□□□ -0.59
SHMT1P1-201ENST00000419974 FXYD6-FXYD2A0A087WZ82 144 aa11.37□□□□□ -0.59
SHMT1P1-201ENST00000419974 RNF222A6NCQ9 220 aa11.37□□□□□ -0.59
SHMT1P1-201ENST00000419974 WRBO00258 174 aa11.37□□□□□ -0.59
SHMT1P1-201ENST00000419974 TMEM50AO95807 157 aa11.37□□□□□ -0.59
SHMT1P1-201ENST00000419974 VDAC2P45880 294 aaPredicted RBP11.37□□□□□ -0.59
SHMT1P1-201ENST00000419974 F2RL1P55085 397 aa11.37□□□□□ -0.59
SHMT1P1-201ENST00000419974 S100A10P60903 97 aa11.37□□□□□ -0.59
SHMT1P1-201ENST00000419974 BAXQ07812 192 aa11.37□□□□□ -0.59
SHMT1P1-201ENST00000419974 C5orf64Q2M2E5 130 aa11.37□□□□□ -0.59
SHMT1P1-201ENST00000419974 LGALSLQ3ZCW2 172 aaPredicted RBP11.37□□□□□ -0.59
SHMT1P1-201ENST00000419974 ZNF562Q6V9R5 426 aa11.37□□□□□ -0.59
SHMT1P1-201ENST00000419974 STPG2Q8N412 459 aa11.37□□□□□ -0.59
SHMT1P1-201ENST00000419974 KCNRGQ8N5I3 272 aa11.37□□□□□ -0.59
SHMT1P1-201ENST00000419974 OR2C3Q8N628 320 aa11.37□□□□□ -0.59
SHMT1P1-201ENST00000419974 INO80EQ8NBZ0 244 aaPredicted RBP11.37□□□□□ -0.59
SHMT1P1-201ENST00000419974 OR1L8Q8NGR8 309 aa11.37□□□□□ -0.59
SHMT1P1-201ENST00000419974 DTD1Q8TEA8 209 aa11.37□□□□□ -0.59
SHMT1P1-201ENST00000419974 RBM14Q96PK6 669 aaKnown RBP11.37□□□□□ -0.59
SHMT1P1-201ENST00000419974 KIAA1456Q9P272 454 aa11.37□□□□□ -0.59
SHMT1P1-201ENST00000419974 METTL1Q9UBP6 276 aaKnown RBP11.37□□□□□ -0.59
SHMT1P1-201ENST00000419974 PITPNC1Q9UKF7 332 aa11.37□□□□□ -0.59
SHMT1P1-201ENST00000419974 TCF19Q9Y242 345 aa11.37□□□□□ -0.59
SHMT1P1-201ENST00000419974 TEX50A0A1B0GTY4 177 aa11.36□□□□□ -0.59
SHMT1P1-201ENST00000419974 INAFM1C9JVW0 142 aa11.36□□□□□ -0.59
SHMT1P1-201ENST00000419974 CRLF1O75462 422 aa11.36□□□□□ -0.59
SHMT1P1-201ENST00000419974 HKR1P10072 659 aa11.36□□□□□ -0.59
SHMT1P1-201ENST00000419974 TMEM11P17152 192 aa11.36□□□□□ -0.59
SHMT1P1-201ENST00000419974 COMPP49747 757 aaPredicted RBP11.36□□□□□ -0.59
SHMT1P1-201ENST00000419974 MMDQ15546 238 aa11.36□□□□□ -0.59
SHMT1P1-201ENST00000419974 BSXQ3C1V8 233 aa11.36□□□□□ -0.59
SHMT1P1-201ENST00000419974 OR5R1Q8NH85 324 aa11.36□□□□□ -0.59
SHMT1P1-201ENST00000419974 DCUN1D4Q92564 292 aa11.36□□□□□ -0.59
SHMT1P1-201ENST00000419974 COMMD5Q9GZQ3 224 aa11.36□□□□□ -0.59
SHMT1P1-201ENST00000419974 MFFQ9GZY8 342 aa11.36□□□□□ -0.59
SHMT1P1-201ENST00000419974 SLC25A31Q9H0C2 315 aa11.36□□□□□ -0.59
SHMT1P1-201ENST00000419974 RBKSQ9H477 322 aa11.36□□□□□ -0.59
SHMT1P1-201ENST00000419974 LSM5Q9Y4Y9 91 aaKnown RBP11.36□□□□□ -0.59
SHMT1P1-201ENST00000419974 U3KQ87 197 aa11.36□□□□□ -0.59
SHMT1P1-201ENST00000419974 ANK3Q12955 4377 aaKnown RBP11.36□□□□□ -0.59
SHMT1P1-201ENST00000419974 A0A1W2PN81 502 aa11.35□□□□□ -0.59
SHMT1P1-201ENST00000419974 A6NDX4 124 aa11.35□□□□□ -0.59
SHMT1P1-201ENST00000419974 M0QZK8 103 aa11.35□□□□□ -0.59
SHMT1P1-201ENST00000419974 TAAR5O14804 337 aa11.35□□□□□ -0.59
SHMT1P1-201ENST00000419974 ARPC5O15511 151 aa11.35□□□□□ -0.59
SHMT1P1-201ENST00000419974 RBMXL2O75526 392 aaKnown RBP11.35□□□□□ -0.59
SHMT1P1-201ENST00000419974 SCGB1D2O95969 90 aa11.35□□□□□ -0.59
SHMT1P1-201ENST00000419974 IFNA17P01571 189 aa11.35□□□□□ -0.59
SHMT1P1-201ENST00000419974 HLA-DRB1P01911 266 aa11.35□□□□□ -0.59
SHMT1P1-201ENST00000419974 CXCL2P19875 107 aa11.35□□□□□ -0.59
SHMT1P1-201ENST00000419974 CNTFRP26992 372 aa11.35□□□□□ -0.59
SHMT1P1-201ENST00000419974 CHRNA7P36544 502 aa11.35□□□□□ -0.59
SHMT1P1-201ENST00000419974 NUP62P37198 522 aaPredicted RBP11.35□□□□□ -0.59
SHMT1P1-201ENST00000419974 OR2B8PP59922 312 aa11.35□□□□□ -0.59
SHMT1P1-201ENST00000419974 RPL23AP62750 156 aaKnown RBP11.35□□□□□ -0.59
SHMT1P1-201ENST00000419974 RPP30P78346 268 aaKnown RBP11.35□□□□□ -0.59
SHMT1P1-201ENST00000419974 TMEM14EPQ6UXP3 125 aa11.35□□□□□ -0.59
SHMT1P1-201ENST00000419974 Q6YL49 198 aa11.35□□□□□ -0.59
SHMT1P1-201ENST00000419974 MRPL41Q8IXM3 137 aaKnown RBP11.35□□□□□ -0.59
SHMT1P1-201ENST00000419974 Q8N9W7 124 aa11.35□□□□□ -0.59
SHMT1P1-201ENST00000419974 SSX3Q99909 188 aa11.35□□□□□ -0.59
SHMT1P1-201ENST00000419974 SONP18583 2426 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms