RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 DHFRP00374 187 aa11.75□□□□□ -0.53
NUP50-204ENST00000417702 IL6RP08887 468 aaPredicted RBP11.75□□□□□ -0.53
NUP50-204ENST00000417702 ZNF735P0CB33 412 aa11.75□□□□□ -0.53
NUP50-204ENST00000417702 SPNP16150 400 aa11.75□□□□□ -0.53
NUP50-204ENST00000417702 ERVK-16P61578 105 aa11.75□□□□□ -0.53
NUP50-204ENST00000417702 ZNF45Q02386 682 aa11.75□□□□□ -0.53
NUP50-204ENST00000417702 EXOSC2Q13868 293 aaKnown RBP11.75□□□□□ -0.53
NUP50-204ENST00000417702 KLF5Q13887 457 aaPredicted RBP11.75□□□□□ -0.53
NUP50-204ENST00000417702 IL18Q14116 193 aa11.75□□□□□ -0.53
NUP50-204ENST00000417702 RPEL1Q2QD12 228 aa11.75□□□□□ -0.53
NUP50-204ENST00000417702 FAM209BQ5JX69 171 aa11.75□□□□□ -0.53
NUP50-204ENST00000417702 DMBX1Q8NFW5 382 aa11.75□□□□□ -0.53
NUP50-204ENST00000417702 FCAMRQ8WWV6 532 aa11.75□□□□□ -0.53
NUP50-204ENST00000417702 GABARAPH6UMI1 98 aa11.74□□□□□ -0.53
NUP50-204ENST00000417702 GPR31O00270 319 aa11.74□□□□□ -0.53
NUP50-204ENST00000417702 RBMXL2O75526 392 aaKnown RBP11.74□□□□□ -0.53
NUP50-204ENST00000417702 PGLYRP1O75594 196 aaPredicted RBP11.74□□□□□ -0.53
NUP50-204ENST00000417702 OR2J3O76001 311 aa11.74□□□□□ -0.53
NUP50-204ENST00000417702 TRBV12-3P01733 135 aa11.74□□□□□ -0.53
NUP50-204ENST00000417702 RLN1P04808 185 aa11.74□□□□□ -0.53
NUP50-204ENST00000417702 S100GP29377 79 aa11.74□□□□□ -0.53
NUP50-204ENST00000417702 S100A5P33763 92 aa11.74□□□□□ -0.53
NUP50-204ENST00000417702 SYNJ2BPP57105 145 aa11.74□□□□□ -0.53
NUP50-204ENST00000417702 POU2AF1Q16633 256 aa11.74□□□□□ -0.53
NUP50-204ENST00000417702 RNASE12Q5GAN4 147 aaKnown RBP11.74□□□□□ -0.53
NUP50-204ENST00000417702 VAX1Q5SQQ9 334 aa11.74□□□□□ -0.53
NUP50-204ENST00000417702 LPCAT3Q6P1A2 487 aa11.74□□□□□ -0.53
NUP50-204ENST00000417702 OR9G4Q8NGQ1 327 aa11.74□□□□□ -0.53
NUP50-204ENST00000417702 OR52I2Q8NH67 350 aa11.74□□□□□ -0.53
NUP50-204ENST00000417702 COMMD9Q9P000 198 aa11.74□□□□□ -0.53
NUP50-204ENST00000417702 SMAD5-AS1Q9Y6J3 95 aa11.74□□□□□ -0.53
NUP50-204ENST00000417702 E7EUB6 86 aa11.73□□□□□ -0.53
NUP50-204ENST00000417702 UPK2O00526 184 aa11.73□□□□□ -0.53
NUP50-204ENST00000417702 CTDSPLO15194 276 aa11.73□□□□□ -0.53
NUP50-204ENST00000417702 S1PR2O95136 353 aa11.73□□□□□ -0.53
NUP50-204ENST00000417702 GP9P14770 177 aa11.73□□□□□ -0.53
NUP50-204ENST00000417702 F2RP25116 425 aa11.73□□□□□ -0.53
NUP50-204ENST00000417702 PSMB6P28072 239 aa11.73□□□□□ -0.53
NUP50-204ENST00000417702 TNFSF8P32971 234 aa11.73□□□□□ -0.53
NUP50-204ENST00000417702 SSBP1Q04837 148 aaKnown RBP11.73□□□□□ -0.53
NUP50-204ENST00000417702 C15orf32Q32M92 178 aa11.73□□□□□ -0.53
NUP50-204ENST00000417702 COMMD5Q9GZQ3 224 aa11.73□□□□□ -0.53
NUP50-204ENST00000417702 FXYD6Q9H0Q3 95 aa11.73□□□□□ -0.53
NUP50-204ENST00000417702 TMEM140Q9NV12 185 aa11.73□□□□□ -0.53
NUP50-204ENST00000417702 KLK11Q9UBX7 282 aa11.73□□□□□ -0.53
NUP50-204ENST00000417702 MTFP1Q9UDX5 166 aa11.73□□□□□ -0.53
NUP50-204ENST00000417702 FBXL7Q9UJT9 491 aa11.73□□□□□ -0.53
NUP50-204ENST00000417702 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.72□□□□□ -0.53
NUP50-204ENST00000417702 A0A1B0GW64 132 aa11.72□□□□□ -0.53
NUP50-204ENST00000417702 FABP12A6NFH5 140 aa11.72□□□□□ -0.53
NUP50-204ENST00000417702 CRYGCP07315 174 aa11.72□□□□□ -0.53
NUP50-204ENST00000417702 NHLRC4P0CG21 123 aaPredicted RBP11.72□□□□□ -0.53
NUP50-204ENST00000417702 DEFA4P12838 97 aa11.72□□□□□ -0.53
NUP50-204ENST00000417702 AREGP15514 252 aa11.72□□□□□ -0.53
NUP50-204ENST00000417702 HIST1H1BP16401 226 aaKnown RBP11.72□□□□□ -0.53
NUP50-204ENST00000417702 OR2B8PP59922 312 aa11.72□□□□□ -0.53
NUP50-204ENST00000417702 C11orf87Q6NUJ2 197 aa11.72□□□□□ -0.53
NUP50-204ENST00000417702 TRAV3A0A0B4J244 114 aa11.71□□□□□ -0.53
NUP50-204ENST00000417702 MARCH11A6NNE9 402 aa11.71□□□□□ -0.53
NUP50-204ENST00000417702 IGLV1-51P01701 117 aa11.71□□□□□ -0.53
NUP50-204ENST00000417702 IFNA6P05013 189 aa11.71□□□□□ -0.53
NUP50-204ENST00000417702 FGF2P09038 288 aa11.71□□□□□ -0.53
NUP50-204ENST00000417702 MYOD1P15172 320 aa11.71□□□□□ -0.53
NUP50-204ENST00000417702 RPA2P15927 270 aa11.71□□□□□ -0.53
NUP50-204ENST00000417702 CTRB1P17538 263 aa11.71□□□□□ -0.53
NUP50-204ENST00000417702 TBPP20226 339 aa11.71□□□□□ -0.53
NUP50-204ENST00000417702 LPAR6P43657 344 aa11.71□□□□□ -0.53
NUP50-204ENST00000417702 TAS2R19P59542 299 aa11.71□□□□□ -0.53
NUP50-204ENST00000417702 PHLDA2Q53GA4 152 aa11.71□□□□□ -0.53
NUP50-204ENST00000417702 CTRB2Q6GPI1 263 aa11.71□□□□□ -0.53
NUP50-204ENST00000417702 TMEM229BQ8NBD8 167 aa11.71□□□□□ -0.53
NUP50-204ENST00000417702 SMIM4Q8WVI0 70 aa11.71□□□□□ -0.53
NUP50-204ENST00000417702 SRSF8Q9BRL6 282 aaKnown RBP11.71□□□□□ -0.53
NUP50-204ENST00000417702 PEMTQ9UBM1 199 aa11.71□□□□□ -0.53
NUP50-204ENST00000417702 H0Y980 276 aa11.7□□□□□ -0.54
NUP50-204ENST00000417702 BMPR1BO00238 502 aa11.7□□□□□ -0.54
NUP50-204ENST00000417702 SNAPC5O75971 98 aa11.7□□□□□ -0.54
NUP50-204ENST00000417702 RNASE10Q5GAN6 216 aaKnown RBP11.7□□□□□ -0.54
NUP50-204ENST00000417702 THOC7Q6I9Y2 204 aaKnown RBP11.7□□□□□ -0.54
NUP50-204ENST00000417702 C19orf35Q6ZS72 473 aa11.7□□□□□ -0.54
NUP50-204ENST00000417702 HAPLN4Q86UW8 402 aa11.7□□□□□ -0.54
NUP50-204ENST00000417702 SLC38A6Q8IZM9 456 aa11.7□□□□□ -0.54
NUP50-204ENST00000417702 FANCD2OSQ96PS1 177 aa11.7□□□□□ -0.54
NUP50-204ENST00000417702 SOSTQ9BQB4 213 aa11.7□□□□□ -0.54
NUP50-204ENST00000417702 QTRT1Q9BXR0 403 aaKnown RBP11.7□□□□□ -0.54
NUP50-204ENST00000417702 CGB1A6NKQ9 187 aa11.69□□□□□ -0.54
NUP50-204ENST00000417702 M0QYG6 137 aa11.69□□□□□ -0.54
NUP50-204ENST00000417702 GSTZ1O43708 216 aaPredicted RBP11.69□□□□□ -0.54
NUP50-204ENST00000417702 NDUFB8O95169 186 aa11.69□□□□□ -0.54
NUP50-204ENST00000417702 KRASP01116 189 aa11.69□□□□□ -0.54
NUP50-204ENST00000417702 CD3DP04234 171 aa11.69□□□□□ -0.54
NUP50-204ENST00000417702 REG1AP05451 166 aa11.69□□□□□ -0.54
NUP50-204ENST00000417702 UCP3P55916 312 aa11.69□□□□□ -0.54
NUP50-204ENST00000417702 IL34Q6ZMJ4 242 aa11.69□□□□□ -0.54
NUP50-204ENST00000417702 HSD17B13Q7Z5P4 300 aaPredicted RBP11.69□□□□□ -0.54
NUP50-204ENST00000417702 OR1L8Q8NGR8 309 aa11.69□□□□□ -0.54
NUP50-204ENST00000417702 EEF1AKMT3Q96AZ1 226 aa11.69□□□□□ -0.54
NUP50-204ENST00000417702 SIGLEC8Q9NYZ4 499 aa11.69□□□□□ -0.54
NUP50-204ENST00000417702 IGLC7A0M8Q6 106 aa11.68□□□□□ -0.54
NUP50-204ENST00000417702 CYB5BO43169 146 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms