RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 SLC25A42Q86VD7 318 aa18.02■□□□□ 0.48
SMARCB1-205ENST00000417137 SGPP2Q8IWX5 399 aa18.02■□□□□ 0.48
SMARCB1-205ENST00000417137 KLHL30-AS1Q8NEE0 82 aa18.02■□□□□ 0.48
SMARCB1-205ENST00000417137 UBE2E2Q96LR5 201 aa18.02■□□□□ 0.48
SMARCB1-205ENST00000417137 NAA60Q9H7X0 242 aa18.02■□□□□ 0.48
SMARCB1-205ENST00000417137 AKIP1Q9NQ31 210 aa18.02■□□□□ 0.48
SMARCB1-205ENST00000417137 VSIG4Q9Y279 399 aa18.02■□□□□ 0.48
SMARCB1-205ENST00000417137 KCNIP3Q9Y2W7 256 aa18.02■□□□□ 0.48
SMARCB1-205ENST00000417137 WIPF1O43516 503 aa18.01■□□□□ 0.47
SMARCB1-205ENST00000417137 IL7P13232 177 aa18.01■□□□□ 0.47
SMARCB1-205ENST00000417137 DHODHQ02127 395 aa18.01■□□□□ 0.47
SMARCB1-205ENST00000417137 ZNF491Q8N8L2 437 aa18.01■□□□□ 0.47
SMARCB1-205ENST00000417137 MYOZ3Q8TDC0 251 aa18.01■□□□□ 0.47
SMARCB1-205ENST00000417137 SEC22AQ96IW7 307 aa18.01■□□□□ 0.47
SMARCB1-205ENST00000417137 FYTTD1Q96QD9 318 aaKnown RBP18.01■□□□□ 0.47
SMARCB1-205ENST00000417137 C7orf50Q9BRJ6 194 aaKnown RBP18.01■□□□□ 0.47
SMARCB1-205ENST00000417137 FKBP11Q9NYL4 201 aa18.01■□□□□ 0.47
SMARCB1-205ENST00000417137 TRAV3A0A0B4J244 114 aa18■□□□□ 0.47
SMARCB1-205ENST00000417137 CRYM-AS1A6NIL9 109 aa18■□□□□ 0.47
SMARCB1-205ENST00000417137 PLXNB1O43157 2135 aa18■□□□□ 0.47
SMARCB1-205ENST00000417137 BRI3O95415 125 aa18■□□□□ 0.47
SMARCB1-205ENST00000417137 PF4P02776 101 aa18■□□□□ 0.47
SMARCB1-205ENST00000417137 OR9G9P0C7N8 305 aa18■□□□□ 0.47
SMARCB1-205ENST00000417137 UCP1P25874 307 aa18■□□□□ 0.47
SMARCB1-205ENST00000417137 SP6Q3SY56 376 aa18■□□□□ 0.47
SMARCB1-205ENST00000417137 C10orf55Q5SWW7 151 aa18■□□□□ 0.47
SMARCB1-205ENST00000417137 ASPHD1Q5U4P2 390 aa18■□□□□ 0.47
SMARCB1-205ENST00000417137 MS4A10Q96PG2 267 aa18■□□□□ 0.47
SMARCB1-205ENST00000417137 CCDC32Q9BV29 185 aa18■□□□□ 0.47
SMARCB1-205ENST00000417137 COA4Q9NYJ1 87 aa18■□□□□ 0.47
SMARCB1-205ENST00000417137 PRNDQ9UKY0 176 aa18■□□□□ 0.47
SMARCB1-205ENST00000417137 IGKV1-39P01597 117 aa17.99■□□□□ 0.47
SMARCB1-205ENST00000417137 TRGV3P03979 118 aa17.99■□□□□ 0.47
SMARCB1-205ENST00000417137 IGKV1D-39P04432 117 aa17.99■□□□□ 0.47
SMARCB1-205ENST00000417137 APELAP0DMC3 54 aa17.99■□□□□ 0.47
SMARCB1-205ENST00000417137 TPPP2P59282 170 aa17.99■□□□□ 0.47
SMARCB1-205ENST00000417137 C8orf86Q6ZUL3 223 aa17.99■□□□□ 0.47
SMARCB1-205ENST00000417137 TTC9CQ8N5M4 171 aa17.99■□□□□ 0.47
SMARCB1-205ENST00000417137 C4orf3Q8WVX3 66 aa17.99■□□□□ 0.47
SMARCB1-205ENST00000417137 TMEM222Q9H0R3 208 aa17.99■□□□□ 0.47
SMARCB1-205ENST00000417137 LINC00854A0A1B0GVQ3 168 aa17.98■□□□□ 0.47
SMARCB1-205ENST00000417137 OR5AC1P0C628 307 aa17.98■□□□□ 0.47
SMARCB1-205ENST00000417137 AKR1C4P17516 323 aa17.98■□□□□ 0.47
SMARCB1-205ENST00000417137 MYCNOSP40205 109 aa17.98■□□□□ 0.47
SMARCB1-205ENST00000417137 KIAA0141Q14154 515 aaPredicted RBP17.98■□□□□ 0.47
SMARCB1-205ENST00000417137 THOC7Q6I9Y2 204 aaKnown RBP17.98■□□□□ 0.47
SMARCB1-205ENST00000417137 C18orf65Q6ZTR6 163 aa17.98■□□□□ 0.47
SMARCB1-205ENST00000417137 OR1L8Q8NGR8 309 aa17.98■□□□□ 0.47
SMARCB1-205ENST00000417137 OR4A16Q8NH70 328 aa17.98■□□□□ 0.47
SMARCB1-205ENST00000417137 SRSF8Q9BRL6 282 aaKnown RBP17.98■□□□□ 0.47
SMARCB1-205ENST00000417137 A0A0G2JLM5 398 aa17.97■□□□□ 0.47
SMARCB1-205ENST00000417137 HMX3A6NHT5 357 aa17.97■□□□□ 0.47
SMARCB1-205ENST00000417137 TEX22C9J3V5 150 aa17.97■□□□□ 0.47
SMARCB1-205ENST00000417137 AKR1C2P52895 323 aa17.97■□□□□ 0.47
SMARCB1-205ENST00000417137 OR2B8PP59922 312 aa17.97■□□□□ 0.47
SMARCB1-205ENST00000417137 RBMS2Q15434 407 aaKnown RBP17.97■□□□□ 0.47
SMARCB1-205ENST00000417137 ADAD2Q8NCV1 583 aaKnown RBP17.97■□□□□ 0.47
SMARCB1-205ENST00000417137 CASTOR1Q8WTX7 329 aa17.97■□□□□ 0.47
SMARCB1-205ENST00000417137 GLYATL2Q8WU03 294 aa17.97■□□□□ 0.47
SMARCB1-205ENST00000417137 RRNAD1Q96FB5 475 aaKnown RBP17.97■□□□□ 0.47
SMARCB1-205ENST00000417137 GALNT14Q96FL9 552 aa17.97■□□□□ 0.47
SMARCB1-205ENST00000417137 QTRT1Q9BXR0 403 aaKnown RBP17.97■□□□□ 0.47
SMARCB1-205ENST00000417137 WDR12Q9GZL7 423 aaKnown RBP17.97■□□□□ 0.47
SMARCB1-205ENST00000417137 OR51B2Q9Y5P1 312 aa17.97■□□□□ 0.47
SMARCB1-205ENST00000417137 E7EUB6 86 aa17.96■□□□□ 0.47
SMARCB1-205ENST00000417137 CDS2O95674 445 aa17.96■□□□□ 0.47
SMARCB1-205ENST00000417137 DHFRP00374 187 aa17.96■□□□□ 0.47
SMARCB1-205ENST00000417137 TRAPPC2P0DI81 140 aa17.96■□□□□ 0.47
SMARCB1-205ENST00000417137 TRAPPC2BP0DI82 140 aa17.96■□□□□ 0.47
SMARCB1-205ENST00000417137 ANXA3P12429 323 aa17.96■□□□□ 0.47
SMARCB1-205ENST00000417137 HSD17B13Q7Z5P4 300 aaPredicted RBP17.96■□□□□ 0.47
SMARCB1-205ENST00000417137 TMED4Q7Z7H5 227 aa17.96■□□□□ 0.47
SMARCB1-205ENST00000417137 OR5B3Q8NH48 314 aa17.96■□□□□ 0.47
SMARCB1-205ENST00000417137 RNASE11Q8TAA1 199 aaKnown RBP17.96■□□□□ 0.47
SMARCB1-205ENST00000417137 ZNF257Q9Y2Q1 563 aa17.96■□□□□ 0.47
SMARCB1-205ENST00000417137 NSG2Q9Y328 171 aa17.96■□□□□ 0.47
SMARCB1-205ENST00000417137 PIGBOS1A0A0B4J2F0 54 aa17.95■□□□□ 0.46
SMARCB1-205ENST00000417137 TEX50A0A1B0GTY4 177 aa17.95■□□□□ 0.46
SMARCB1-205ENST00000417137 C13orf42A0A1B0GVH6 325 aa17.95■□□□□ 0.46
SMARCB1-205ENST00000417137 NPIPB5A8MRT5 1133 aa17.95■□□□□ 0.46
SMARCB1-205ENST00000417137 CCL24O00175 119 aa17.95■□□□□ 0.46
SMARCB1-205ENST00000417137 RBMXL2O75526 392 aaKnown RBP17.95■□□□□ 0.46
SMARCB1-205ENST00000417137 MYOD1P15172 320 aa17.95■□□□□ 0.46
SMARCB1-205ENST00000417137 RUNX1Q01196 453 aa17.95■□□□□ 0.46
SMARCB1-205ENST00000417137 ZNF846Q147U1 533 aa17.95■□□□□ 0.46
SMARCB1-205ENST00000417137 TMEM128Q5BJH2 165 aa17.95■□□□□ 0.46
SMARCB1-205ENST00000417137 TMEM230Q96A57 120 aa17.95■□□□□ 0.46
SMARCB1-205ENST00000417137 USMG5Q96IX5 58 aa17.95■□□□□ 0.46
SMARCB1-205ENST00000417137 C15orf61A6NNL5 157 aa17.94■□□□□ 0.46
SMARCB1-205ENST00000417137 PSMB6P28072 239 aa17.94■□□□□ 0.46
SMARCB1-205ENST00000417137 CCR6P51684 374 aa17.94■□□□□ 0.46
SMARCB1-205ENST00000417137 FAM219AQ8IW50 185 aa17.94■□□□□ 0.46
SMARCB1-205ENST00000417137 RBPMSQ93062 196 aaKnown RBP17.94■□□□□ 0.46
SMARCB1-205ENST00000417137 TMEM56Q96MV1 263 aa17.94■□□□□ 0.46
SMARCB1-205ENST00000417137 GNB4Q9HAV0 340 aa17.94■□□□□ 0.46
SMARCB1-205ENST00000417137 TMEM14BQ9NUH8 114 aa17.94■□□□□ 0.46
SMARCB1-205ENST00000417137 TNCP24821 2201 aa17.94■□□□□ 0.46
SMARCB1-205ENST00000417137 A0A1B0GW64 132 aa17.93■□□□□ 0.46
SMARCB1-205ENST00000417137 I3L521 148 aa17.93■□□□□ 0.46
SMARCB1-205ENST00000417137 IGKV1-5P01602 117 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 386.4 ms