RNA–Protein interactions for RNA: ENST00000417012.5

LRRTM1-205, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 3,021 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-205ENST00000417012 ADH4P08319 380 aa10.62□□□□□ -0.71
LRRTM1-205ENST00000417012 DUTP33316 252 aaKnown RBP10.62□□□□□ -0.71
LRRTM1-205ENST00000417012 TMEM183BQ1AE95 376 aa10.62□□□□□ -0.71
LRRTM1-205ENST00000417012 Q6ZWC4 215 aa10.62□□□□□ -0.71
LRRTM1-205ENST00000417012 CNEP1R1Q8N9A8 125 aa10.62□□□□□ -0.71
LRRTM1-205ENST00000417012 CXXC4Q9H2H0 198 aa10.62□□□□□ -0.71
LRRTM1-205ENST00000417012 RIF1Q5UIP0 2472 aaKnown RBP10.62□□□□□ -0.71
LRRTM1-205ENST00000417012 INTS1Q8N201 2190 aaKnown RBP10.61□□□□□ -0.71
LRRTM1-205ENST00000417012 SERF1AO75920 110 aa10.61□□□□□ -0.71
LRRTM1-205ENST00000417012 MT-CO2P00403 227 aa10.61□□□□□ -0.71
LRRTM1-205ENST00000417012 RPL31P62899 125 aaKnown RBP10.61□□□□□ -0.71
LRRTM1-205ENST00000417012 SMIM21Q3B7S5 101 aa10.61□□□□□ -0.71
LRRTM1-205ENST00000417012 TRAT1Q6PIZ9 186 aa10.61□□□□□ -0.71
LRRTM1-205ENST00000417012 C20orf144Q9BQM9 153 aa10.61□□□□□ -0.71
LRRTM1-205ENST00000417012 YTHDF2Q9Y5A9 579 aaKnown RBP10.61□□□□□ -0.71
LRRTM1-205ENST00000417012 AQP7O14520 342 aa10.61□□□□□ -0.71
LRRTM1-205ENST00000417012 RPLP1P05386 114 aaKnown RBP10.61□□□□□ -0.71
LRRTM1-205ENST00000417012 CD33P20138 364 aa10.61□□□□□ -0.71
LRRTM1-205ENST00000417012 GCHFRP30047 84 aa10.61□□□□□ -0.71
LRRTM1-205ENST00000417012 HTD2P86397 168 aa10.61□□□□□ -0.71
LRRTM1-205ENST00000417012 EDDM3AQ14507 147 aa10.61□□□□□ -0.71
LRRTM1-205ENST00000417012 ZNF718Q3SXZ3 478 aa10.61□□□□□ -0.71
LRRTM1-205ENST00000417012 CLEC2AQ6UVW9 174 aa10.61□□□□□ -0.71
LRRTM1-205ENST00000417012 BAGE3Q86Y29 109 aa10.61□□□□□ -0.71
LRRTM1-205ENST00000417012 BAGE2Q86Y30 109 aa10.61□□□□□ -0.71
LRRTM1-205ENST00000417012 C11orf53Q8IXP5 236 aa10.61□□□□□ -0.71
LRRTM1-205ENST00000417012 OR1L6Q8NGR2 347 aa10.61□□□□□ -0.71
LRRTM1-205ENST00000417012 SSMEM1Q8WWF3 244 aa10.61□□□□□ -0.71
LRRTM1-205ENST00000417012 HSPB9Q9BQS6 159 aa10.61□□□□□ -0.71
LRRTM1-205ENST00000417012 FAM234AQ9H0X4 552 aa10.61□□□□□ -0.71
LRRTM1-205ENST00000417012 GNG12Q9UBI6 72 aa10.61□□□□□ -0.71
LRRTM1-205ENST00000417012 METRNQ9UJH8 293 aa10.61□□□□□ -0.71
LRRTM1-205ENST00000417012 TP53TG3Q9ULZ0 132 aa10.61□□□□□ -0.71
LRRTM1-205ENST00000417012 SLC17A3O00476 420 aa10.6□□□□□ -0.71
LRRTM1-205ENST00000417012 TNFSF13O75888 250 aa10.6□□□□□ -0.71
LRRTM1-205ENST00000417012 AGFG2O95081 481 aa10.6□□□□□ -0.71
LRRTM1-205ENST00000417012 TMPRSS3P57727 454 aa10.6□□□□□ -0.71
LRRTM1-205ENST00000417012 ATMQ13315 3056 aa10.6□□□□□ -0.71
LRRTM1-205ENST00000417012 TPTE2P1Q5T6R2 138 aa10.6□□□□□ -0.71
LRRTM1-205ENST00000417012 WDR82Q6UXN9 313 aa10.6□□□□□ -0.71
LRRTM1-205ENST00000417012 TEX43Q6ZNM6 134 aa10.6□□□□□ -0.71
LRRTM1-205ENST00000417012 PIP4P1Q86T03 277 aa10.6□□□□□ -0.71
LRRTM1-205ENST00000417012 OR5AU1Q8NGC0 362 aa10.6□□□□□ -0.71
LRRTM1-205ENST00000417012 OR52E5Q8NH55 327 aa10.6□□□□□ -0.71
LRRTM1-205ENST00000417012 UHRF2Q96PU4 802 aa10.6□□□□□ -0.71
LRRTM1-205ENST00000417012 SAMD10Q9BYL1 202 aa10.6□□□□□ -0.71
LRRTM1-205ENST00000417012 AKAP13Q12802 2813 aa10.6□□□□□ -0.71
LRRTM1-205ENST00000417012 HEATR1Q9H583 2144 aaKnown RBP10.6□□□□□ -0.71
LRRTM1-205ENST00000417012 M0R1X1 148 aa10.6□□□□□ -0.71
LRRTM1-205ENST00000417012 FCN1O00602 326 aa10.6□□□□□ -0.71
LRRTM1-205ENST00000417012 GFRA3O60609 400 aa10.6□□□□□ -0.71
LRRTM1-205ENST00000417012 ESDP10768 282 aa10.6□□□□□ -0.71
LRRTM1-205ENST00000417012 VDAC2P45880 294 aaPredicted RBP10.6□□□□□ -0.71
LRRTM1-205ENST00000417012 RHOBP62745 196 aa10.6□□□□□ -0.71
LRRTM1-205ENST00000417012 PLPPR2Q96GM1 343 aa10.6□□□□□ -0.71
LRRTM1-205ENST00000417012 MIEN1Q9BRT3 115 aa10.6□□□□□ -0.71
LRRTM1-205ENST00000417012 VAMP8Q9BV40 100 aa10.6□□□□□ -0.71
LRRTM1-205ENST00000417012 DCHS1Q96JQ0 3298 aa10.6□□□□□ -0.71
LRRTM1-205ENST00000417012 PRSS46E5RG02 174 aa10.6□□□□□ -0.71
LRRTM1-205ENST00000417012 YPEL1O60688 119 aa10.6□□□□□ -0.71
LRRTM1-205ENST00000417012 RPEL1Q2QD12 228 aa10.6□□□□□ -0.71
LRRTM1-205ENST00000417012 HLA-DRB5Q30154 266 aa10.6□□□□□ -0.71
LRRTM1-205ENST00000417012 VKORC1L1Q8N0U8 176 aa10.6□□□□□ -0.71
LRRTM1-205ENST00000417012 YPEL2Q96QA6 119 aa10.6□□□□□ -0.71
LRRTM1-205ENST00000417012 DCTN5Q9BTE1 182 aa10.6□□□□□ -0.71
LRRTM1-205ENST00000417012 NPVFQ9HCQ7 196 aa10.6□□□□□ -0.71
LRRTM1-205ENST00000417012 PAM16Q9Y3D7 125 aa10.6□□□□□ -0.71
LRRTM1-205ENST00000417012 C9JCJ5 164 aa10.59□□□□□ -0.71
LRRTM1-205ENST00000417012 C15orf65H3BRN8 121 aa10.59□□□□□ -0.71
LRRTM1-205ENST00000417012 K7EN84 100 aa10.59□□□□□ -0.71
LRRTM1-205ENST00000417012 TIMM8AO60220 97 aaPredicted RBP10.59□□□□□ -0.71
LRRTM1-205ENST00000417012 IL6RP08887 468 aaPredicted RBP10.59□□□□□ -0.71
LRRTM1-205ENST00000417012 IER3P46695 156 aa10.59□□□□□ -0.71
LRRTM1-205ENST00000417012 LINC00310P59036 64 aa10.59□□□□□ -0.71
LRRTM1-205ENST00000417012 VWA1Q6PCB0 445 aa10.59□□□□□ -0.71
LRRTM1-205ENST00000417012 LRP11Q86VZ4 500 aa10.59□□□□□ -0.71
LRRTM1-205ENST00000417012 ABHD12Q8N2K0 398 aa10.59□□□□□ -0.71
LRRTM1-205ENST00000417012 ASCL3Q9NQ33 180 aa10.59□□□□□ -0.71
LRRTM1-205ENST00000417012 ZNF292O60281 2723 aa10.59□□□□□ -0.71
LRRTM1-205ENST00000417012 MAP1BP46821 2468 aaKnown RBP10.59□□□□□ -0.71
LRRTM1-205ENST00000417012 SNURFLB1AK76 121 aa10.59□□□□□ -0.71
LRRTM1-205ENST00000417012 LGALS4P56470 323 aa10.59□□□□□ -0.71
LRRTM1-205ENST00000417012 EFNB3Q15768 340 aa10.59□□□□□ -0.71
LRRTM1-205ENST00000417012 INO80CQ6PI98 192 aaPredicted RBP10.59□□□□□ -0.71
LRRTM1-205ENST00000417012 Q8TCH9 128 aa10.59□□□□□ -0.71
LRRTM1-205ENST00000417012 C11orf52Q96A22 123 aa10.59□□□□□ -0.71
LRRTM1-205ENST00000417012 LY96Q9Y6Y9 160 aa10.59□□□□□ -0.71
LRRTM1-205ENST00000417012 HCFC1P51610 2035 aa10.59□□□□□ -0.71
LRRTM1-205ENST00000417012 RP1L1Q8IWN7 2480 aaPredicted RBP10.59□□□□□ -0.71
LRRTM1-205ENST00000417012 ZNF318Q5VUA4 2279 aa10.58□□□□□ -0.71
LRRTM1-205ENST00000417012 RPL19P84098 196 aaKnown RBP10.58□□□□□ -0.72
LRRTM1-205ENST00000417012 RAB31Q13636 194 aa10.58□□□□□ -0.72
LRRTM1-205ENST00000417012 STPG3Q8N7X2 389 aa10.58□□□□□ -0.72
LRRTM1-205ENST00000417012 VN1R17PQ8TDU5 208 aa10.58□□□□□ -0.72
LRRTM1-205ENST00000417012 S1PR3Q99500 378 aa10.58□□□□□ -0.72
LRRTM1-205ENST00000417012 TMEM140Q9NV12 185 aa10.58□□□□□ -0.72
LRRTM1-205ENST00000417012 CLCF1Q9UBD9 225 aa10.58□□□□□ -0.72
LRRTM1-205ENST00000417012 FZR1Q9UM11 496 aa10.58□□□□□ -0.72
LRRTM1-205ENST00000417012 TCF19Q9Y242 345 aa10.58□□□□□ -0.72
LRRTM1-205ENST00000417012 LSM4Q9Y4Z0 139 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms