RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 LGALS1P09382 135 aaKnown RBP13.97□□□□□ -0.17
SEMA3B-201ENST00000416295 PI3P19957 117 aa13.97□□□□□ -0.17
SEMA3B-201ENST00000416295 ETV6P41212 452 aa13.97□□□□□ -0.17
SEMA3B-201ENST00000416295 AP3S2P59780 193 aa13.97□□□□□ -0.17
SEMA3B-201ENST00000416295 ZNF616Q08AN1 781 aa13.97□□□□□ -0.17
SEMA3B-201ENST00000416295 FHL3Q13643 280 aa13.97□□□□□ -0.17
SEMA3B-201ENST00000416295 ZNF79Q15937 498 aa13.97□□□□□ -0.17
SEMA3B-201ENST00000416295 C1QL4Q86Z23 238 aa13.97□□□□□ -0.17
SEMA3B-201ENST00000416295 OR11H1Q8NG94 326 aa13.97□□□□□ -0.17
SEMA3B-201ENST00000416295 MARCH1Q8TCQ1 289 aa13.97□□□□□ -0.17
SEMA3B-201ENST00000416295 FYTTD1Q96QD9 318 aaKnown RBP13.97□□□□□ -0.17
SEMA3B-201ENST00000416295 MCRIP2Q9BUT9 160 aaKnown RBP13.97□□□□□ -0.17
SEMA3B-201ENST00000416295 GPR61Q9BZJ8 451 aa13.97□□□□□ -0.17
SEMA3B-201ENST00000416295 COMMD5Q9GZQ3 224 aa13.97□□□□□ -0.17
SEMA3B-201ENST00000416295 SLC2A8Q9NY64 477 aa13.97□□□□□ -0.17
SEMA3B-201ENST00000416295 COPZ2Q9P299 210 aa13.97□□□□□ -0.17
SEMA3B-201ENST00000416295 C14orf166Q9Y224 244 aaKnown RBP13.97□□□□□ -0.17
SEMA3B-201ENST00000416295 C13orf42A0A1B0GVH6 325 aa13.96□□□□□ -0.17
SEMA3B-201ENST00000416295 TEX22C9J3V5 150 aa13.96□□□□□ -0.17
SEMA3B-201ENST00000416295 H0Y980 276 aa13.96□□□□□ -0.17
SEMA3B-201ENST00000416295 SERPINE2P07093 398 aa13.96□□□□□ -0.17
SEMA3B-201ENST00000416295 CTSDP07339 412 aaPredicted RBP13.96□□□□□ -0.17
SEMA3B-201ENST00000416295 OR8U8P0C7N1 319 aa13.96□□□□□ -0.17
SEMA3B-201ENST00000416295 IGLL1P15814 213 aa13.96□□□□□ -0.17
SEMA3B-201ENST00000416295 RPA2P15927 270 aa13.96□□□□□ -0.17
SEMA3B-201ENST00000416295 FAUP35544 74 aaKnown RBP13.96□□□□□ -0.17
SEMA3B-201ENST00000416295 G6PCP35575 357 aa13.96□□□□□ -0.17
SEMA3B-201ENST00000416295 RAB25P57735 213 aa13.96□□□□□ -0.17
SEMA3B-201ENST00000416295 OXLD1Q5BKU9 147 aa13.96□□□□□ -0.17
SEMA3B-201ENST00000416295 FOXB2Q5VYV0 432 aa13.96□□□□□ -0.17
SEMA3B-201ENST00000416295 TTC9CQ8N5M4 171 aa13.96□□□□□ -0.17
SEMA3B-201ENST00000416295 OR51S1Q8NGJ8 323 aa13.96□□□□□ -0.17
SEMA3B-201ENST00000416295 OR6Q1Q8NGQ2 317 aa13.96□□□□□ -0.17
SEMA3B-201ENST00000416295 OR1N2Q8NGR9 330 aa13.96□□□□□ -0.17
SEMA3B-201ENST00000416295 DPF1Q92782 380 aa13.96□□□□□ -0.17
SEMA3B-201ENST00000416295 TRIM63Q969Q1 353 aa13.96□□□□□ -0.17
SEMA3B-201ENST00000416295 SCP2D1Q9UJQ7 156 aa13.96□□□□□ -0.17
SEMA3B-201ENST00000416295 ZNF257Q9Y2Q1 563 aa13.96□□□□□ -0.17
SEMA3B-201ENST00000416295 B3GALNT1O75752 331 aa13.95□□□□□ -0.18
SEMA3B-201ENST00000416295 SNAPC5O75971 98 aa13.95□□□□□ -0.18
SEMA3B-201ENST00000416295 BEAN1Q3B7T3 259 aa13.95□□□□□ -0.18
SEMA3B-201ENST00000416295 KPRPQ5T749 579 aaPredicted RBP13.95□□□□□ -0.18
SEMA3B-201ENST00000416295 DEDD2Q8WXF8 326 aa13.95□□□□□ -0.18
SEMA3B-201ENST00000416295 MRGPRFQ96AM1 343 aa13.95□□□□□ -0.18
SEMA3B-201ENST00000416295 USMG5Q96IX5 58 aa13.95□□□□□ -0.18
SEMA3B-201ENST00000416295 TSC22D3Q99576 134 aa13.95□□□□□ -0.18
SEMA3B-201ENST00000416295 SRSF8Q9BRL6 282 aaKnown RBP13.95□□□□□ -0.18
SEMA3B-201ENST00000416295 MCUBQ9NWR8 336 aa13.95□□□□□ -0.18
SEMA3B-201ENST00000416295 TRAV3A0A0B4J244 114 aa13.94□□□□□ -0.18
SEMA3B-201ENST00000416295 C3orf85A0A1B0GTC6 90 aa13.94□□□□□ -0.18
SEMA3B-201ENST00000416295 HMX3A6NHT5 357 aa13.94□□□□□ -0.18
SEMA3B-201ENST00000416295 FAM223BA6NKX1 122 aa13.94□□□□□ -0.18
SEMA3B-201ENST00000416295 NPIPB5A8MRT5 1133 aa13.94□□□□□ -0.18
SEMA3B-201ENST00000416295 E7EUB6 86 aa13.94□□□□□ -0.18
SEMA3B-201ENST00000416295 DHFRP00374 187 aa13.94□□□□□ -0.18
SEMA3B-201ENST00000416295 IGHV3-11P01762 117 aa13.94□□□□□ -0.18
SEMA3B-201ENST00000416295 OR2B8PP59922 312 aa13.94□□□□□ -0.18
SEMA3B-201ENST00000416295 THOC7Q6I9Y2 204 aaKnown RBP13.94□□□□□ -0.18
SEMA3B-201ENST00000416295 FAM223AQ8IWN6 122 aa13.94□□□□□ -0.18
SEMA3B-201ENST00000416295 TOMM5Q8N4H5 51 aa13.94□□□□□ -0.18
SEMA3B-201ENST00000416295 SCGB3A2Q96PL1 93 aa13.94□□□□□ -0.18
SEMA3B-201ENST00000416295 TNCP24821 2201 aa13.94□□□□□ -0.18
SEMA3B-201ENST00000416295 A0A1B0GW64 132 aa13.93□□□□□ -0.18
SEMA3B-201ENST00000416295 LINC01619G3V211 115 aa13.93□□□□□ -0.18
SEMA3B-201ENST00000416295 ATG12O94817 140 aa13.93□□□□□ -0.18
SEMA3B-201ENST00000416295 KLF9Q13886 244 aaPredicted RBP13.93□□□□□ -0.18
SEMA3B-201ENST00000416295 H2BFWTQ7Z2G1 175 aa13.93□□□□□ -0.18
SEMA3B-201ENST00000416295 SEC22AQ96IW7 307 aa13.93□□□□□ -0.18
SEMA3B-201ENST00000416295 TP53RKQ96S44 253 aa13.93□□□□□ -0.18
SEMA3B-201ENST00000416295 QTRT1Q9BXR0 403 aaKnown RBP13.93□□□□□ -0.18
SEMA3B-201ENST00000416295 ALX4Q9H161 411 aaPredicted RBP13.93□□□□□ -0.18
SEMA3B-201ENST00000416295 FKBP11Q9NYL4 201 aa13.93□□□□□ -0.18
SEMA3B-201ENST00000416295 PRNDQ9UKY0 176 aa13.93□□□□□ -0.18
SEMA3B-201ENST00000416295 TRBV9A0A0B4J1U6 114 aa13.92□□□□□ -0.18
SEMA3B-201ENST00000416295 IGKV1-39P01597 117 aa13.92□□□□□ -0.18
SEMA3B-201ENST00000416295 IGKV1D-39P04432 117 aa13.92□□□□□ -0.18
SEMA3B-201ENST00000416295 HSPB1P04792 205 aaKnown RBP13.92□□□□□ -0.18
SEMA3B-201ENST00000416295 MYOD1P15172 320 aa13.92□□□□□ -0.18
SEMA3B-201ENST00000416295 PSMB6P28072 239 aa13.92□□□□□ -0.18
SEMA3B-201ENST00000416295 RHOGP84095 191 aa13.92□□□□□ -0.18
SEMA3B-201ENST00000416295 HSD17B13Q7Z5P4 300 aaPredicted RBP13.92□□□□□ -0.18
SEMA3B-201ENST00000416295 GDPD1Q8N9F7 314 aa13.92□□□□□ -0.18
SEMA3B-201ENST00000416295 NECAP1Q8NC96 275 aa13.92□□□□□ -0.18
SEMA3B-201ENST00000416295 OR1L8Q8NGR8 309 aa13.92□□□□□ -0.18
SEMA3B-201ENST00000416295 RTBDNQ9BSG5 229 aaPredicted RBP13.92□□□□□ -0.18
SEMA3B-201ENST00000416295 SRRQ9GZT4 340 aa13.92□□□□□ -0.18
SEMA3B-201ENST00000416295 C5orf66Q9H5L9 145 aa13.92□□□□□ -0.18
SEMA3B-201ENST00000416295 GPR132Q9UNW8 380 aa13.92□□□□□ -0.18
SEMA3B-201ENST00000416295 IGHV4OR15-8A0A075B7B6 117 aa13.91□□□□□ -0.18
SEMA3B-201ENST00000416295 A0A087WW49 117 aa13.91□□□□□ -0.18
SEMA3B-201ENST00000416295 TEX13DA0A0J9YY54 714 aaPredicted RBP13.91□□□□□ -0.18
SEMA3B-201ENST00000416295 CGB1A6NKQ9 187 aa13.91□□□□□ -0.18
SEMA3B-201ENST00000416295 PRH1P02810 166 aa13.91□□□□□ -0.18
SEMA3B-201ENST00000416295 CRYGCP07315 174 aa13.91□□□□□ -0.18
SEMA3B-201ENST00000416295 TRAPPC2P0DI81 140 aa13.91□□□□□ -0.18
SEMA3B-201ENST00000416295 TRAPPC2BP0DI82 140 aa13.91□□□□□ -0.18
SEMA3B-201ENST00000416295 AREGP15514 252 aa13.91□□□□□ -0.18
SEMA3B-201ENST00000416295 ZNF45Q02386 682 aa13.91□□□□□ -0.18
SEMA3B-201ENST00000416295 TRIM16LQ309B1 348 aa13.91□□□□□ -0.18
SEMA3B-201ENST00000416295 OR5B3Q8NH48 314 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms