RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 NCR3LG1Q68D85 454 aa11.85□□□□□ -0.51
SGCE-202ENST00000415788 SSX9Q7RTT3 188 aa11.85□□□□□ -0.51
SGCE-202ENST00000415788 Q8N7P7 452 aa11.85□□□□□ -0.51
SGCE-202ENST00000415788 C14orf144Q96I85 54 aa11.85□□□□□ -0.51
SGCE-202ENST00000415788 ZNF286AQ9HBT8 521 aa11.85□□□□□ -0.51
SGCE-202ENST00000415788 YAE1D1Q9NRH1 226 aa11.85□□□□□ -0.51
SGCE-202ENST00000415788 TMEM242Q9NWH2 141 aa11.85□□□□□ -0.51
SGCE-202ENST00000415788 ABCA2Q9BZC7 2435 aa11.85□□□□□ -0.51
SGCE-202ENST00000415788 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.85□□□□□ -0.515e-9■■■■■ 37
SGCE-202ENST00000415788 CXCL1P09341 107 aa11.85□□□□□ -0.51
SGCE-202ENST00000415788 IGHV1-8P0DP01 117 aa11.85□□□□□ -0.51
SGCE-202ENST00000415788 BAXQ07812 192 aa11.85□□□□□ -0.51
SGCE-202ENST00000415788 PNRC1Q12796 327 aaPredicted RBP11.85□□□□□ -0.51
SGCE-202ENST00000415788 ICAM4Q14773 271 aa11.85□□□□□ -0.51
SGCE-202ENST00000415788 VMO1Q7Z5L0 202 aa11.85□□□□□ -0.51
SGCE-202ENST00000415788 GALMQ96C23 342 aa11.85□□□□□ -0.51
SGCE-202ENST00000415788 SMR3AQ99954 134 aa11.85□□□□□ -0.51
SGCE-202ENST00000415788 PCGF1Q9BSM1 259 aa11.85□□□□□ -0.51
SGCE-202ENST00000415788 IDI2-AS1Q9NZ38 188 aa11.85□□□□□ -0.51
SGCE-202ENST00000415788 WSB1Q9Y6I7 421 aa11.85□□□□□ -0.51
SGCE-202ENST00000415788 DUXBA0A1W2PPF3 345 aa11.84□□□□□ -0.51
SGCE-202ENST00000415788 ZNF727A8MUV8 499 aa11.84□□□□□ -0.51
SGCE-202ENST00000415788 TRDCB7Z8K6 153 aa11.84□□□□□ -0.51
SGCE-202ENST00000415788 ST8SIA5O15466 376 aa11.84□□□□□ -0.51
SGCE-202ENST00000415788 HBZP02008 142 aa11.84□□□□□ -0.51
SGCE-202ENST00000415788 RD3LP0DJH9 198 aa11.84□□□□□ -0.51
SGCE-202ENST00000415788 HLA-DRB3P79483 266 aa11.84□□□□□ -0.51
SGCE-202ENST00000415788 Q6ZPA2 131 aa11.84□□□□□ -0.51
SGCE-202ENST00000415788 STX12Q86Y82 276 aa11.84□□□□□ -0.51
SGCE-202ENST00000415788 OR5R1Q8NH85 324 aa11.84□□□□□ -0.51
SGCE-202ENST00000415788 TBX15Q96SF7 602 aa11.84□□□□□ -0.51
SGCE-202ENST00000415788 LYRM2Q9NU23 88 aaPredicted RBP11.84□□□□□ -0.51
SGCE-202ENST00000415788 OTOGQ6ZRI0 2925 aa11.84□□□□□ -0.51
SGCE-202ENST00000415788 ABCA1O95477 2261 aa11.83□□□□□ -0.52
SGCE-202ENST00000415788 F2RL2O00254 374 aa11.83□□□□□ -0.52
SGCE-202ENST00000415788 NKX2-1P43699 371 aaPredicted RBP11.83□□□□□ -0.52
SGCE-202ENST00000415788 FXYD4P59646 89 aa11.83□□□□□ -0.52
SGCE-202ENST00000415788 HERV-K104P61576 105 aa11.83□□□□□ -0.52
SGCE-202ENST00000415788 CCL20P78556 96 aa11.83□□□□□ -0.52
SGCE-202ENST00000415788 HTD2P86397 168 aa11.83□□□□□ -0.52
SGCE-202ENST00000415788 PHLDA2Q53GA4 152 aa11.83□□□□□ -0.52
SGCE-202ENST00000415788 PRAMEF5Q5TYX0 476 aa11.83□□□□□ -0.52
SGCE-202ENST00000415788 PRR18Q8N4B5 295 aa11.83□□□□□ -0.52
SGCE-202ENST00000415788 RFESDQ8TAC1 157 aa11.83□□□□□ -0.52
SGCE-202ENST00000415788 RCC1LQ96I51 464 aaKnown RBP11.83□□□□□ -0.52
SGCE-202ENST00000415788 AKAP9Q99996 3911 aa11.83□□□□□ -0.52
SGCE-202ENST00000415788 A0A087X0M5 115 aa11.83□□□□□ -0.52
SGCE-202ENST00000415788 TRAV1-1A0A0B4J248 108 aa11.83□□□□□ -0.52
SGCE-202ENST00000415788 A0A1B0GV50 99 aa11.83□□□□□ -0.52
SGCE-202ENST00000415788 A0A1B0GX30 115 aa11.83□□□□□ -0.52
SGCE-202ENST00000415788 FAM24AA6NFZ4 105 aa11.83□□□□□ -0.52
SGCE-202ENST00000415788 CYB5BO43169 146 aa11.83□□□□□ -0.52
SGCE-202ENST00000415788 HNF1AP20823 631 aa11.83□□□□□ -0.52
SGCE-202ENST00000415788 OMGP23515 440 aa11.83□□□□□ -0.52
SGCE-202ENST00000415788 RND2P52198 227 aa11.83□□□□□ -0.52
SGCE-202ENST00000415788 VAMP2P63027 116 aa11.83□□□□□ -0.52
SGCE-202ENST00000415788 AKR1C8PQ5T2L2 129 aa11.83□□□□□ -0.52
SGCE-202ENST00000415788 SLC35G3Q8N808 338 aa11.83□□□□□ -0.52
SGCE-202ENST00000415788 TMEM133Q9H2Q1 129 aa11.83□□□□□ -0.52
SGCE-202ENST00000415788 IGSF23A1L1A6 192 aa11.82□□□□□ -0.52
SGCE-202ENST00000415788 DDTP30046 118 aa11.82□□□□□ -0.52
SGCE-202ENST00000415788 HAGHQ16775 308 aa11.82□□□□□ -0.52
SGCE-202ENST00000415788 ZNF343Q6P1L6 599 aa11.82□□□□□ -0.52
SGCE-202ENST00000415788 TMEM252Q8N6L7 170 aa11.82□□□□□ -0.52
SGCE-202ENST00000415788 CYB561D1Q8N8Q1 229 aa11.82□□□□□ -0.52
SGCE-202ENST00000415788 OR1L1Q8NH94 360 aa11.82□□□□□ -0.52
SGCE-202ENST00000415788 TNFRSF14Q92956 283 aa11.82□□□□□ -0.52
SGCE-202ENST00000415788 FAM210BQ96KR6 192 aa11.82□□□□□ -0.52
SGCE-202ENST00000415788 TMEM56Q96MV1 263 aa11.82□□□□□ -0.52
SGCE-202ENST00000415788 JPT1Q9UK76 154 aa11.82□□□□□ -0.52
SGCE-202ENST00000415788 TMEM56-RWDD3S4R434 201 aa11.82□□□□□ -0.52
SGCE-202ENST00000415788 FLNAP21333 2647 aaKnown RBP11.82□□□□□ -0.52
SGCE-202ENST00000415788 VPS13CQ709C8 3753 aa11.82□□□□□ -0.52
SGCE-202ENST00000415788 ARHGAP32A7KAX9 2087 aa11.81□□□□□ -0.52
SGCE-202ENST00000415788 TGIF2-C20orf24A0A0A6YYL0 155 aa11.81□□□□□ -0.52
SGCE-202ENST00000415788 C3orf85A0A1B0GTC6 90 aa11.81□□□□□ -0.52
SGCE-202ENST00000415788 SLC31A2O15432 143 aa11.81□□□□□ -0.52
SGCE-202ENST00000415788 MPPED1O15442 326 aa11.81□□□□□ -0.52
SGCE-202ENST00000415788 MMP23AO75900 390 aa11.81□□□□□ -0.52
SGCE-202ENST00000415788 AVPP01185 164 aa11.81□□□□□ -0.52
SGCE-202ENST00000415788 TRGC2P03986 189 aa11.81□□□□□ -0.52
SGCE-202ENST00000415788 CTXN2P0C2S0 81 aa11.81□□□□□ -0.52
SGCE-202ENST00000415788 TAS2R60P59551 318 aa11.81□□□□□ -0.52
SGCE-202ENST00000415788 BPIFB3P59826 476 aa11.81□□□□□ -0.52
SGCE-202ENST00000415788 FAM120AOSQ5T036 256 aa11.81□□□□□ -0.52
SGCE-202ENST00000415788 C1orf229Q6ZS94 237 aaPredicted RBP11.81□□□□□ -0.52
SGCE-202ENST00000415788 IL1F10Q8WWZ1 152 aa11.81□□□□□ -0.52
SGCE-202ENST00000415788 CABLES2Q9BTV7 478 aa11.81□□□□□ -0.52
SGCE-202ENST00000415788 GPR61Q9BZJ8 451 aa11.81□□□□□ -0.52
SGCE-202ENST00000415788 TMEM222Q9H0R3 208 aa11.81□□□□□ -0.52
SGCE-202ENST00000415788 GNG12Q9UBI6 72 aa11.81□□□□□ -0.52
SGCE-202ENST00000415788 PIGBOS1A0A0B4J2F0 54 aa11.8□□□□□ -0.52
SGCE-202ENST00000415788 LOC102723971A0A1B0GUV8 181 aa11.8□□□□□ -0.52
SGCE-202ENST00000415788 CLDN34H7C241 214 aa11.8□□□□□ -0.52
SGCE-202ENST00000415788 LY86O95711 162 aa11.8□□□□□ -0.52
SGCE-202ENST00000415788 SCTP09683 121 aa11.8□□□□□ -0.52
SGCE-202ENST00000415788 TRGC1P0CF51 173 aa11.8□□□□□ -0.52
SGCE-202ENST00000415788 HOXB4P17483 251 aaPredicted RBP11.8□□□□□ -0.52
SGCE-202ENST00000415788 UBE2E1P51965 193 aa11.8□□□□□ -0.52
SGCE-202ENST00000415788 LOXL3P58215 753 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms