RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 SPINT2O43291 252 aa9.55□□□□□ -0.88
RFFL-205ENST00000415395 GCGP01275 180 aa9.55□□□□□ -0.88
RFFL-205ENST00000415395 IGLV2-14P01704 120 aa9.55□□□□□ -0.88
RFFL-205ENST00000415395 CD99P14209 185 aa9.55□□□□□ -0.88
RFFL-205ENST00000415395 IL2RGP31785 369 aa9.55□□□□□ -0.88
RFFL-205ENST00000415395 MRPS11P82912 194 aaKnown RBP9.55□□□□□ -0.88
RFFL-205ENST00000415395 HTD2P86397 168 aa9.55□□□□□ -0.88
RFFL-205ENST00000415395 ARL16Q0P5N6 197 aa9.55□□□□□ -0.88
RFFL-205ENST00000415395 C11orf71Q6IPW1 123 aa9.55□□□□□ -0.88
RFFL-205ENST00000415395 ZNF600Q6ZNG1 722 aa9.55□□□□□ -0.88
RFFL-205ENST00000415395 C5orf24Q7Z6I8 188 aa9.55□□□□□ -0.88
RFFL-205ENST00000415395 HAPLN4Q86UW8 402 aa9.55□□□□□ -0.88
RFFL-205ENST00000415395 ZNF843Q8N446 348 aa9.55□□□□□ -0.88
RFFL-205ENST00000415395 OR1P1Q8NH06 330 aa9.55□□□□□ -0.88
RFFL-205ENST00000415395 BBC3Q96PG8 261 aaPredicted RBP9.55□□□□□ -0.88
RFFL-205ENST00000415395 HIST1H2BLQ99880 126 aa9.55□□□□□ -0.88
RFFL-205ENST00000415395 RAB1BQ9H0U4 201 aa9.55□□□□□ -0.88
RFFL-205ENST00000415395 PRDM13Q9H4Q3 707 aa9.55□□□□□ -0.88
RFFL-205ENST00000415395 KIAA2026Q5HYC2 2103 aa9.55□□□□□ -0.88
RFFL-205ENST00000415395 PKDREJQ9NTG1 2253 aa9.54□□□□□ -0.88
RFFL-205ENST00000415395 F6UZH7 168 aa9.54□□□□□ -0.88
RFFL-205ENST00000415395 PDE6DO43924 150 aa9.54□□□□□ -0.88
RFFL-205ENST00000415395 HBZP02008 142 aa9.54□□□□□ -0.88
RFFL-205ENST00000415395 GYPAP02724 150 aa9.54□□□□□ -0.88
RFFL-205ENST00000415395 TFF1P04155 84 aa9.54□□□□□ -0.88
RFFL-205ENST00000415395 PFN1P07737 140 aaKnown RBP9.54□□□□□ -0.88
RFFL-205ENST00000415395 DDTP30046 118 aa9.54□□□□□ -0.88
RFFL-205ENST00000415395 LCN2P80188 198 aa9.54□□□□□ -0.88
RFFL-205ENST00000415395 JOSD1Q15040 202 aaPredicted RBP9.54□□□□□ -0.88
RFFL-205ENST00000415395 TMEM30BQ3MIR4 351 aa9.54□□□□□ -0.88
RFFL-205ENST00000415395 PDZD11Q5EBL8 140 aa9.54□□□□□ -0.88
RFFL-205ENST00000415395 FFAR4Q5NUL3 377 aa9.54□□□□□ -0.88
RFFL-205ENST00000415395 FAM201AQ5SY85 155 aa9.54□□□□□ -0.88
RFFL-205ENST00000415395 ZNF66Q6ZN08 573 aa9.54□□□□□ -0.88
RFFL-205ENST00000415395 SSX9Q7RTT3 188 aa9.54□□□□□ -0.88
RFFL-205ENST00000415395 ZNRF1Q8ND25 227 aa9.54□□□□□ -0.88
RFFL-205ENST00000415395 OR4F5Q8NH21 305 aa9.54□□□□□ -0.88
RFFL-205ENST00000415395 OR4X1Q8NH49 305 aa9.54□□□□□ -0.88
RFFL-205ENST00000415395 CCL17Q92583 94 aa9.54□□□□□ -0.88
RFFL-205ENST00000415395 OR4F4Q96R69 305 aa9.54□□□□□ -0.88
RFFL-205ENST00000415395 CHODLQ9H9P2 273 aa9.54□□□□□ -0.88
RFFL-205ENST00000415395 KCNIP2Q9NS61 270 aa9.54□□□□□ -0.88
RFFL-205ENST00000415395 KAAG1Q9UBP8 84 aa9.54□□□□□ -0.88
RFFL-205ENST00000415395 GPX4P36969 197 aaPredicted RBP9.53□□□□□ -0.88
RFFL-205ENST00000415395 RPL23P62829 140 aaKnown RBP9.53□□□□□ -0.88
RFFL-205ENST00000415395 EDDM3AQ14507 147 aa9.53□□□□□ -0.88
RFFL-205ENST00000415395 IZUMO4Q1ZYL8 232 aa9.53□□□□□ -0.88
RFFL-205ENST00000415395 VWC2Q2TAL6 325 aa9.53□□□□□ -0.88
RFFL-205ENST00000415395 TMEM249Q2WGJ8 235 aa9.53□□□□□ -0.88
RFFL-205ENST00000415395 H2BFWTQ7Z2G1 175 aa9.53□□□□□ -0.88
RFFL-205ENST00000415395 RPP25LQ8N5L8 163 aaKnown RBP9.53□□□□□ -0.88
RFFL-205ENST00000415395 OR13A1Q8NGR1 328 aa9.53□□□□□ -0.88
RFFL-205ENST00000415395 OR2T10Q8NGZ9 312 aa9.53□□□□□ -0.88
RFFL-205ENST00000415395 MRGPRDQ8TDS7 321 aa9.53□□□□□ -0.88
RFFL-205ENST00000415395 DTD1Q8TEA8 209 aa9.53□□□□□ -0.88
RFFL-205ENST00000415395 TMEM170AQ8WVE7 144 aa9.53□□□□□ -0.88
RFFL-205ENST00000415395 NEU4Q8WWR8 484 aaPredicted RBP9.53□□□□□ -0.88
RFFL-205ENST00000415395 TMEM18Q96B42 140 aa9.53□□□□□ -0.88
RFFL-205ENST00000415395 RPUSD4Q96CM3 377 aaKnown RBP9.53□□□□□ -0.88
RFFL-205ENST00000415395 IMMP2LQ96T52 175 aa9.53□□□□□ -0.88
RFFL-205ENST00000415395 PARLQ9H300 379 aa9.53□□□□□ -0.88
RFFL-205ENST00000415395 TRAV39A0A0B4J263 110 aa9.53□□□□□ -0.88
RFFL-205ENST00000415395 XKRY2A2RUG3 117 aa9.53□□□□□ -0.88
RFFL-205ENST00000415395 FAM90A9PA6NNJ1 464 aa9.53□□□□□ -0.88
RFFL-205ENST00000415395 C15orf65H3BRN8 121 aa9.53□□□□□ -0.88
RFFL-205ENST00000415395 C19orf84I3L1E1 186 aa9.53□□□□□ -0.88
RFFL-205ENST00000415395 PHOX2AO14813 284 aa9.53□□□□□ -0.88
RFFL-205ENST00000415395 TNFRSF13BO14836 293 aaPredicted RBP9.53□□□□□ -0.88
RFFL-205ENST00000415395 MPDU1O75352 247 aa9.53□□□□□ -0.88
RFFL-205ENST00000415395 TYMSP04818 313 aa9.53□□□□□ -0.88
RFFL-205ENST00000415395 GNB2P62879 340 aa9.53□□□□□ -0.88
RFFL-205ENST00000415395 GAMTQ14353 236 aa9.53□□□□□ -0.88
RFFL-205ENST00000415395 GFI1BQ5VTD9 330 aa9.53□□□□□ -0.88
RFFL-205ENST00000415395 SSX7Q7RTT5 188 aa9.53□□□□□ -0.88
RFFL-205ENST00000415395 DEFB108BQ8NET1 73 aa9.53□□□□□ -0.88
RFFL-205ENST00000415395 OR51G1Q8NGK1 321 aa9.53□□□□□ -0.88
RFFL-205ENST00000415395 OR1L1Q8NH94 360 aa9.53□□□□□ -0.88
RFFL-205ENST00000415395 CORO2AQ92828 525 aa9.53□□□□□ -0.88
RFFL-205ENST00000415395 CCL13Q99616 98 aa9.53□□□□□ -0.88
RFFL-205ENST00000415395 HSD17B10Q99714 261 aaKnown RBP9.53□□□□□ -0.88
RFFL-205ENST00000415395 SSX3Q99909 188 aa9.53□□□□□ -0.88
RFFL-205ENST00000415395 OR2D2Q9H210 308 aa9.53□□□□□ -0.88
RFFL-205ENST00000415395 SLC25A22Q9H936 323 aa9.53□□□□□ -0.88
RFFL-205ENST00000415395 DCAF16Q9NXF7 216 aa9.53□□□□□ -0.88
RFFL-205ENST00000415395 JPT1Q9UK76 154 aa9.53□□□□□ -0.88
RFFL-205ENST00000415395 RELNP78509 3460 aa9.52□□□□□ -0.89
RFFL-205ENST00000415395 A0A087X0M5 115 aa9.52□□□□□ -0.89
RFFL-205ENST00000415395 A0A1B0GX30 115 aa9.52□□□□□ -0.89
RFFL-205ENST00000415395 A6NNC1 897 aa9.52□□□□□ -0.89
RFFL-205ENST00000415395 F2RL2O00254 374 aa9.52□□□□□ -0.89
RFFL-205ENST00000415395 GGCTO75223 188 aaKnown RBP9.52□□□□□ -0.89
RFFL-205ENST00000415395 RD3LP0DJH9 198 aa9.52□□□□□ -0.89
RFFL-205ENST00000415395 CGB3P0DN86 165 aa9.52□□□□□ -0.89
RFFL-205ENST00000415395 CGB7P0DN87 165 aa9.52□□□□□ -0.89
RFFL-205ENST00000415395 CDC34P49427 236 aaPredicted RBP9.52□□□□□ -0.89
RFFL-205ENST00000415395 PDLIM4P50479 330 aa9.52□□□□□ -0.89
RFFL-205ENST00000415395 EDDM3BP56851 147 aa9.52□□□□□ -0.89
RFFL-205ENST00000415395 MEF2CQ06413 473 aaPredicted RBP9.52□□□□□ -0.89
RFFL-205ENST00000415395 RAB1CQ92928 201 aa9.52□□□□□ -0.89
RFFL-205ENST00000415395 RAB24Q969Q5 203 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms