RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 IGHV4-59P01825 116 aa7.71□□□□□ -1.18
RIF1-202ENST00000414861 HNRNPCP07910 306 aaKnown RBP eCLIP7.71□□□□□ -1.185e-6■■■□□ 16.4
RIF1-202ENST00000414861 CD99P14209 185 aa7.71□□□□□ -1.18
RIF1-202ENST00000414861 RPL8P62917 257 aaKnown RBP7.71□□□□□ -1.18
RIF1-202ENST00000414861 LY6EQ16553 131 aa7.71□□□□□ -1.18
RIF1-202ENST00000414861 Q71RC1 249 aaPredicted RBP7.71□□□□□ -1.18
RIF1-202ENST00000414861 TEX45Q8NA69 505 aa7.71□□□□□ -1.18
RIF1-202ENST00000414861 VSTM2AQ8TAG5 236 aa7.71□□□□□ -1.18
RIF1-202ENST00000414861 AIFM2Q9BRQ8 373 aa7.71□□□□□ -1.18
RIF1-202ENST00000414861 FXYD6-FXYD2A0A087WZ82 144 aa7.71□□□□□ -1.18
RIF1-202ENST00000414861 A0A1B0GW64 132 aa7.71□□□□□ -1.18
RIF1-202ENST00000414861 NCBP2LA6PVI3 153 aaKnown RBP7.71□□□□□ -1.18
RIF1-202ENST00000414861 DEDDO75618 318 aa7.71□□□□□ -1.18
RIF1-202ENST00000414861 OR2F2O95006 317 aa7.71□□□□□ -1.18
RIF1-202ENST00000414861 PRSS8Q16651 343 aa7.71□□□□□ -1.18
RIF1-202ENST00000414861 C5orf64Q2M2E5 130 aa7.71□□□□□ -1.18
RIF1-202ENST00000414861 ZNF429Q86V71 674 aa7.71□□□□□ -1.18
RIF1-202ENST00000414861 PPP1R27Q86WC6 154 aa7.71□□□□□ -1.18
RIF1-202ENST00000414861 Q8N9W7 124 aa7.71□□□□□ -1.18
RIF1-202ENST00000414861 GSX1Q9H4S2 264 aaPredicted RBP7.71□□□□□ -1.18
RIF1-202ENST00000414861 C11orf1Q9H5F2 150 aa7.71□□□□□ -1.18
RIF1-202ENST00000414861 TCF19Q9Y242 345 aa7.71□□□□□ -1.18
RIF1-202ENST00000414861 CGB1A6NKQ9 187 aa7.7□□□□□ -1.18
RIF1-202ENST00000414861 IAPPP10997 89 aa7.7□□□□□ -1.18
RIF1-202ENST00000414861 SRP14P37108 136 aaKnown RBP7.7□□□□□ -1.18
RIF1-202ENST00000414861 PLGLAQ15195 96 aa7.7□□□□□ -1.18
RIF1-202ENST00000414861 TUSC1Q2TAM9 212 aa7.7□□□□□ -1.18
RIF1-202ENST00000414861 NOXA1Q86UR1 476 aa7.7□□□□□ -1.18
RIF1-202ENST00000414861 OR4A5Q8NH83 315 aa7.7□□□□□ -1.18
RIF1-202ENST00000414861 SLC25A33Q9BSK2 321 aa7.7□□□□□ -1.18
RIF1-202ENST00000414861 RBKSQ9H477 322 aa7.7□□□□□ -1.18
RIF1-202ENST00000414861 PRNDQ9UKY0 176 aa7.7□□□□□ -1.18
RIF1-202ENST00000414861 OR51B2Q9Y5P1 312 aa7.7□□□□□ -1.18
RIF1-202ENST00000414861 MAST4O15021 2626 aa7.7□□□□□ -1.18
RIF1-202ENST00000414861 A6NDX4 124 aa7.7□□□□□ -1.18
RIF1-202ENST00000414861 SH2D7A6NKC9 451 aaPredicted RBP7.7□□□□□ -1.18
RIF1-202ENST00000414861 FAM90A26D6RGX4 464 aa7.7□□□□□ -1.18
RIF1-202ENST00000414861 CHST1O43916 411 aa7.7□□□□□ -1.18
RIF1-202ENST00000414861 CA2P00918 260 aa7.7□□□□□ -1.18
RIF1-202ENST00000414861 IFNA17P01571 189 aa7.7□□□□□ -1.18
RIF1-202ENST00000414861 IER3P46695 156 aa7.7□□□□□ -1.18
RIF1-202ENST00000414861 GNB1P62873 340 aa7.7□□□□□ -1.18
RIF1-202ENST00000414861 FGL1Q08830 312 aa7.7□□□□□ -1.18
RIF1-202ENST00000414861 AANATQ16613 207 aa7.7□□□□□ -1.18
RIF1-202ENST00000414861 PRSS54Q6PEW0 395 aa7.7□□□□□ -1.18
RIF1-202ENST00000414861 CLEC9AQ6UXN8 241 aa7.7□□□□□ -1.18
RIF1-202ENST00000414861 KIAA1456Q9P272 454 aa7.7□□□□□ -1.18
RIF1-202ENST00000414861 TEX50A0A1B0GTY4 177 aa7.69□□□□□ -1.18
RIF1-202ENST00000414861 MSGN1A6NI15 193 aa7.69□□□□□ -1.18
RIF1-202ENST00000414861 H3BP45 60 aa7.69□□□□□ -1.18
RIF1-202ENST00000414861 WRBO00258 174 aa7.69□□□□□ -1.18
RIF1-202ENST00000414861 SYNGR2O43760 224 aa7.69□□□□□ -1.18
RIF1-202ENST00000414861 AMY1AP04745 511 aa7.69□□□□□ -1.18
RIF1-202ENST00000414861 LYL1P12980 280 aa7.69□□□□□ -1.18
RIF1-202ENST00000414861 EIF2B2P49770 351 aaKnown RBP7.69□□□□□ -1.18
RIF1-202ENST00000414861 PAX9P55771 341 aa7.69□□□□□ -1.18
RIF1-202ENST00000414861 NDPQ00604 133 aa7.69□□□□□ -1.18
RIF1-202ENST00000414861 TNXAQ16473 311 aa7.69□□□□□ -1.18
RIF1-202ENST00000414861 PDLIM3Q53GG5 364 aaPredicted RBP7.69□□□□□ -1.18
RIF1-202ENST00000414861 Q6YL49 198 aa7.69□□□□□ -1.18
RIF1-202ENST00000414861 MMD2Q8IY49 270 aa7.69□□□□□ -1.18
RIF1-202ENST00000414861 SIGLECL1Q8N7X8 197 aa7.69□□□□□ -1.18
RIF1-202ENST00000414861 THAP6Q8TBB0 222 aa7.69□□□□□ -1.18
RIF1-202ENST00000414861 DCUN1D4Q92564 292 aa7.69□□□□□ -1.18
RIF1-202ENST00000414861 RBM14Q96PK6 669 aaKnown RBP7.69□□□□□ -1.18
RIF1-202ENST00000414861 HINT2Q9BX68 163 aa7.69□□□□□ -1.18
RIF1-202ENST00000414861 TNFRSF19Q9NS68 423 aa7.69□□□□□ -1.18
RIF1-202ENST00000414861 ARPC5O15511 151 aa7.69□□□□□ -1.18
RIF1-202ENST00000414861 PET100P0DJ07 73 aa7.69□□□□□ -1.18
RIF1-202ENST00000414861 SLC25A4P12235 298 aa7.69□□□□□ -1.18
RIF1-202ENST00000414861 SPCS3P61009 180 aa7.69□□□□□ -1.18
RIF1-202ENST00000414861 HSPE1P61604 102 aaKnown RBP7.69□□□□□ -1.18
RIF1-202ENST00000414861 TEX29Q8N6K0 151 aa7.69□□□□□ -1.18
RIF1-202ENST00000414861 C5orf56Q8N8D9 126 aa7.69□□□□□ -1.18
RIF1-202ENST00000414861 OR10W1Q8NGF6 305 aa7.69□□□□□ -1.18
RIF1-202ENST00000414861 OR52E5Q8NH55 327 aa7.69□□□□□ -1.18
RIF1-202ENST00000414861 COMMD5Q9GZQ3 224 aa7.69□□□□□ -1.18
RIF1-202ENST00000414861 PRDM13Q9H4Q3 707 aa7.69□□□□□ -1.18
RIF1-202ENST00000414861 TMEM160Q9NX00 188 aa7.69□□□□□ -1.18
RIF1-202ENST00000414861 ZNF257Q9Y2Q1 563 aa7.69□□□□□ -1.18
RIF1-202ENST00000414861 TEP1Q99973 2627 aaKnown RBP7.68□□□□□ -1.18
RIF1-202ENST00000414861 RNF222A6NCQ9 220 aa7.68□□□□□ -1.18
RIF1-202ENST00000414861 CEBPZOSA8MTT3 80 aa7.68□□□□□ -1.18
RIF1-202ENST00000414861 HOXA3O43365 443 aaPredicted RBP7.68□□□□□ -1.18
RIF1-202ENST00000414861 APELAP0DMC3 54 aa7.68□□□□□ -1.18
RIF1-202ENST00000414861 FOSL1P15407 271 aa7.68□□□□□ -1.18
RIF1-202ENST00000414861 HNF1AP20823 631 aa7.68□□□□□ -1.18
RIF1-202ENST00000414861 COMPP49747 757 aaPredicted RBP7.68□□□□□ -1.18
RIF1-202ENST00000414861 PRCDQ00LT1 54 aa7.68□□□□□ -1.18
RIF1-202ENST00000414861 OR8H1Q8NGG4 311 aa7.68□□□□□ -1.18
RIF1-202ENST00000414861 OR5B3Q8NH48 314 aa7.68□□□□□ -1.18
RIF1-202ENST00000414861 DTD1Q8TEA8 209 aa7.68□□□□□ -1.18
RIF1-202ENST00000414861 HYLS1Q96M11 299 aa7.68□□□□□ -1.18
RIF1-202ENST00000414861 HSPB9Q9BQS6 159 aa7.68□□□□□ -1.18
RIF1-202ENST00000414861 NDUFA4L2Q9NRX3 87 aa7.68□□□□□ -1.18
RIF1-202ENST00000414861 TNFSF18Q9UNG2 199 aa7.68□□□□□ -1.18
RIF1-202ENST00000414861 MOB4Q9Y3A3 225 aa7.68□□□□□ -1.18
RIF1-202ENST00000414861 NF1P21359 2839 aa7.68□□□□□ -1.18
RIF1-202ENST00000414861 FGF2P09038 288 aa7.68□□□□□ -1.18
RIF1-202ENST00000414861 VDAC2P45880 294 aaPredicted RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms