RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 SYT3Q9BQG1 590 aa7.83□□□□□ -1.16
SNHG3-201ENST00000413987 BANF2Q9H503 90 aa7.83□□□□□ -1.16
SNHG3-201ENST00000413987 NAA60Q9H7X0 242 aa7.83□□□□□ -1.16
SNHG3-201ENST00000413987 TECRQ9NZ01 308 aaKnown RBP7.83□□□□□ -1.16
SNHG3-201ENST00000413987 RCL1Q9Y2P8 373 aaKnown RBP7.83□□□□□ -1.16
SNHG3-201ENST00000413987 UFC1Q9Y3C8 167 aa7.83□□□□□ -1.16
SNHG3-201ENST00000413987 IGHV3-15A0A0B4J1V0 119 aa7.83□□□□□ -1.16
SNHG3-201ENST00000413987 ZNF814B7Z6K7 855 aa7.83□□□□□ -1.16
SNHG3-201ENST00000413987 TRDCB7Z8K6 153 aa7.83□□□□□ -1.16
SNHG3-201ENST00000413987 F5H697 171 aa7.83□□□□□ -1.16
SNHG3-201ENST00000413987 G3V4G9 280 aa7.83□□□□□ -1.16
SNHG3-201ENST00000413987 PRYO14603 147 aa7.83□□□□□ -1.16
SNHG3-201ENST00000413987 NPIPB7O75200 414 aa7.83□□□□□ -1.16
SNHG3-201ENST00000413987 ABCA11PQ4W5N1 156 aa7.83□□□□□ -1.16
SNHG3-201ENST00000413987 C18orf12Q96KH6 178 aa7.83□□□□□ -1.16
SNHG3-201ENST00000413987 PECRQ9BY49 303 aa7.83□□□□□ -1.16
SNHG3-201ENST00000413987 FZR1Q9UM11 496 aa7.83□□□□□ -1.16
SNHG3-201ENST00000413987 SVILO95425 2214 aa7.83□□□□□ -1.16
SNHG3-201ENST00000413987 S1PR2O95136 353 aa7.82□□□□□ -1.16
SNHG3-201ENST00000413987 PIGPP57054 158 aa7.82□□□□□ -1.16
SNHG3-201ENST00000413987 SMIM20Q8N5G0 67 aa7.82□□□□□ -1.16
SNHG3-201ENST00000413987 ABHD14BQ96IU4 210 aa7.82□□□□□ -1.16
SNHG3-201ENST00000413987 ALKBH3Q96Q83 286 aaPredicted RBP7.82□□□□□ -1.16
SNHG3-201ENST00000413987 GPER1Q99527 375 aa7.82□□□□□ -1.16
SNHG3-201ENST00000413987 P2RX4Q99571 388 aa7.82□□□□□ -1.16
SNHG3-201ENST00000413987 PYGO2Q9BRQ0 406 aa7.82□□□□□ -1.16
SNHG3-201ENST00000413987 TTTY12Q9BZ98 90 aa7.82□□□□□ -1.16
SNHG3-201ENST00000413987 ZNF665Q9H7R5 613 aa7.82□□□□□ -1.16
SNHG3-201ENST00000413987 PLEKHF2Q9H8W4 249 aa7.82□□□□□ -1.16
SNHG3-201ENST00000413987 SIGLEC8Q9NYZ4 499 aa7.82□□□□□ -1.16
SNHG3-201ENST00000413987 CISD1Q9NZ45 108 aaKnown RBP7.82□□□□□ -1.16
SNHG3-201ENST00000413987 KLHL13Q9P2N7 655 aa7.82□□□□□ -1.16
SNHG3-201ENST00000413987 TPRP12270 2363 aaKnown RBP7.82□□□□□ -1.16
SNHG3-201ENST00000413987 RP1L1Q8IWN7 2480 aaPredicted RBP7.82□□□□□ -1.16
SNHG3-201ENST00000413987 MED19A0JLT2 244 aaPredicted RBP7.82□□□□□ -1.16
SNHG3-201ENST00000413987 MT-CO2P00403 227 aa7.82□□□□□ -1.16
SNHG3-201ENST00000413987 SP1P08047 785 aa7.82□□□□□ -1.16
SNHG3-201ENST00000413987 ZNF728P0DKX0 622 aa7.82□□□□□ -1.16
SNHG3-201ENST00000413987 BLVRBP30043 206 aaPredicted RBP7.82□□□□□ -1.16
SNHG3-201ENST00000413987 OR3A4PP47883 348 aa7.82□□□□□ -1.16
SNHG3-201ENST00000413987 DSCR4P56555 118 aaPredicted RBP7.82□□□□□ -1.16
SNHG3-201ENST00000413987 COL10A1Q03692 680 aa7.82□□□□□ -1.16
SNHG3-201ENST00000413987 MFAP5Q13361 173 aa7.82□□□□□ -1.16
SNHG3-201ENST00000413987 HERPUD1Q15011 391 aa7.82□□□□□ -1.16
SNHG3-201ENST00000413987 C3AR1Q16581 482 aa7.82□□□□□ -1.16
SNHG3-201ENST00000413987 TBC1D28Q2M2D7 210 aa7.82□□□□□ -1.16
SNHG3-201ENST00000413987 ACOT6Q3I5F7 207 aaPredicted RBP7.82□□□□□ -1.16
SNHG3-201ENST00000413987 OR5AS1Q8N127 324 aa7.82□□□□□ -1.16
SNHG3-201ENST00000413987 SLAMF6Q96DU3 332 aa7.82□□□□□ -1.16
SNHG3-201ENST00000413987 SDF2L1Q9HCN8 221 aa7.82□□□□□ -1.16
SNHG3-201ENST00000413987 FOXI3A8MTJ6 420 aaPredicted RBP7.81□□□□□ -1.16
SNHG3-201ENST00000413987 VENTXO95231 258 aa7.81□□□□□ -1.16
SNHG3-201ENST00000413987 CDS2O95674 445 aa7.81□□□□□ -1.16
SNHG3-201ENST00000413987 F2RP25116 425 aa7.81□□□□□ -1.16
SNHG3-201ENST00000413987 OR10J1P30954 320 aa7.81□□□□□ -1.16
SNHG3-201ENST00000413987 TMPRSS3P57727 454 aa7.81□□□□□ -1.16
SNHG3-201ENST00000413987 B3GALT5-AS1P59052 145 aa7.81□□□□□ -1.16
SNHG3-201ENST00000413987 SRPXP78539 464 aa7.81□□□□□ -1.16
SNHG3-201ENST00000413987 HSF1Q00613 529 aa7.81□□□□□ -1.16
SNHG3-201ENST00000413987 BAXQ07812 192 aa7.81□□□□□ -1.16
SNHG3-201ENST00000413987 OR10J3Q5JRS4 329 aa7.81□□□□□ -1.16
SNHG3-201ENST00000413987 LEMD1Q68G75 181 aa7.81□□□□□ -1.16
SNHG3-201ENST00000413987 H1FOOQ8IZA3 346 aaPredicted RBP7.81□□□□□ -1.16
SNHG3-201ENST00000413987 ABHD12Q8N2K0 398 aa7.81□□□□□ -1.16
SNHG3-201ENST00000413987 RTN4IP1Q8WWV3 396 aaPredicted RBP7.81□□□□□ -1.16
SNHG3-201ENST00000413987 EXTL1Q92935 676 aa7.81□□□□□ -1.16
SNHG3-201ENST00000413987 OR5B12Q96R08 314 aa7.81□□□□□ -1.16
SNHG3-201ENST00000413987 ETV2O00321 342 aaPredicted RBP7.8□□□□□ -1.16
SNHG3-201ENST00000413987 HPNP05981 417 aa7.8□□□□□ -1.16
SNHG3-201ENST00000413987 ZNF133P52736 654 aaPredicted RBP7.8□□□□□ -1.16
SNHG3-201ENST00000413987 PLGLB1Q02325 96 aa7.8□□□□□ -1.16
SNHG3-201ENST00000413987 LYZL2Q7Z4W2 148 aa7.8□□□□□ -1.16
SNHG3-201ENST00000413987 OR1K1Q8NGR3 316 aa7.8□□□□□ -1.16
SNHG3-201ENST00000413987 NPRL2Q8WTW4 380 aa7.8□□□□□ -1.16
SNHG3-201ENST00000413987 GRAMD2BQ96HH9 432 aa7.8□□□□□ -1.16
SNHG3-201ENST00000413987 SPIN2AQ99865 258 aa7.8□□□□□ -1.16
SNHG3-201ENST00000413987 SPIN2BQ9BPZ2 258 aa7.8□□□□□ -1.16
SNHG3-201ENST00000413987 FAM173AQ9BQD7 235 aa7.8□□□□□ -1.16
SNHG3-201ENST00000413987 TM2D1Q9BX74 207 aa7.8□□□□□ -1.16
SNHG3-201ENST00000413987 DEFB127Q9H1M4 99 aa7.8□□□□□ -1.16
SNHG3-201ENST00000413987 CBLN4Q9NTU7 201 aa7.8□□□□□ -1.16
SNHG3-201ENST00000413987 MED29Q9NX70 200 aa7.8□□□□□ -1.16
SNHG3-201ENST00000413987 B3GAT1Q9P2W7 334 aa7.8□□□□□ -1.16
SNHG3-201ENST00000413987 ANXA10Q9UJ72 324 aa7.8□□□□□ -1.16
SNHG3-201ENST00000413987 PKD1L2Q7Z442 2459 aa7.8□□□□□ -1.16
SNHG3-201ENST00000413987 A1L4Q6 167 aa7.8□□□□□ -1.16
SNHG3-201ENST00000413987 ATP5LO75964 103 aa7.8□□□□□ -1.16
SNHG3-201ENST00000413987 PGA3P0DJD8 388 aa7.8□□□□□ -1.16
SNHG3-201ENST00000413987 OMGP23515 440 aa7.8□□□□□ -1.16
SNHG3-201ENST00000413987 PRDX4Q13162 271 aa7.8□□□□□ -1.16
SNHG3-201ENST00000413987 ZNF66Q6ZN08 573 aa7.8□□□□□ -1.16
SNHG3-201ENST00000413987 OR51E1Q8TCB6 317 aa7.8□□□□□ -1.16
SNHG3-201ENST00000413987 DDIT4LQ96D03 193 aa7.8□□□□□ -1.16
SNHG3-201ENST00000413987 ZNF488Q96MN9 340 aa7.8□□□□□ -1.16
SNHG3-201ENST00000413987 EMC6Q9BV81 110 aa7.8□□□□□ -1.16
SNHG3-201ENST00000413987 SRXN1Q9BYN0 137 aa7.8□□□□□ -1.16
SNHG3-201ENST00000413987 SPANXB1Q9NS25 103 aaPredicted RBP7.8□□□□□ -1.16
SNHG3-201ENST00000413987 FKBP11Q9NYL4 201 aa7.8□□□□□ -1.16
SNHG3-201ENST00000413987 ADGRG4Q8IZF6 3080 aa7.8□□□□□ -1.16
SNHG3-201ENST00000413987 ACACBO00763 2458 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms