RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 FAM219AQ8IW50 185 aa7.18□□□□□ -1.26
SYNE1-211ENST00000413186 MS4A7Q9GZW8 240 aaPredicted RBP7.18□□□□□ -1.26
SYNE1-211ENST00000413186 NUP210LQ5VU65 1888 aa7.18□□□□□ -1.26
SYNE1-211ENST00000413186 TGIF2-C20orf24A0A0A6YYL0 155 aa7.18□□□□□ -1.26
SYNE1-211ENST00000413186 IGHV3-7P01780 117 aa7.18□□□□□ -1.26
SYNE1-211ENST00000413186 NTF4P34130 210 aa7.18□□□□□ -1.26
SYNE1-211ENST00000413186 UBE2L3P68036 154 aaKnown RBP7.18□□□□□ -1.26
SYNE1-211ENST00000413186 ZNRF1Q8ND25 227 aa7.18□□□□□ -1.26
SYNE1-211ENST00000413186 OR4C13Q8NGP0 309 aa7.18□□□□□ -1.26
SYNE1-211ENST00000413186 FLYWCH2Q96CP2 140 aaKnown RBP7.18□□□□□ -1.26
SYNE1-211ENST00000413186 SSBP3Q9BWW4 388 aaPredicted RBP7.18□□□□□ -1.26
SYNE1-211ENST00000413186 ACTR3CQ9C0K3 210 aaPredicted RBP7.18□□□□□ -1.26
SYNE1-211ENST00000413186 MPZP25189 248 aa7.18□□□□□ -1.26
SYNE1-211ENST00000413186 Q56UQ5 140 aa7.18□□□□□ -1.26
SYNE1-211ENST00000413186 SLC16A13Q7RTY0 426 aa7.18□□□□□ -1.26
SYNE1-211ENST00000413186 METTL1Q9UBP6 276 aaKnown RBP7.18□□□□□ -1.26
SYNE1-211ENST00000413186 A0A1W2PRD5 423 aa7.17□□□□□ -1.26
SYNE1-211ENST00000413186 A0A1W2PRF3 423 aa7.17□□□□□ -1.26
SYNE1-211ENST00000413186 A0A1W2PRM7 423 aa7.17□□□□□ -1.26
SYNE1-211ENST00000413186 ZNF727A8MUV8 499 aa7.17□□□□□ -1.26
SYNE1-211ENST00000413186 LEUTXA8MZ59 168 aa7.17□□□□□ -1.26
SYNE1-211ENST00000413186 SRSF10O75494 262 aaKnown RBP7.17□□□□□ -1.26
SYNE1-211ENST00000413186 IL4P05112 153 aa7.17□□□□□ -1.26
SYNE1-211ENST00000413186 SCTP09683 121 aa7.17□□□□□ -1.26
SYNE1-211ENST00000413186 NHLRC3Q5JS37 347 aa7.17□□□□□ -1.26
SYNE1-211ENST00000413186 SPANXN5Q5MJ07 72 aa7.17□□□□□ -1.26
SYNE1-211ENST00000413186 NCR3LG1Q68D85 454 aa7.17□□□□□ -1.26
SYNE1-211ENST00000413186 TMEM182Q6ZP80 229 aaPredicted RBP7.17□□□□□ -1.26
SYNE1-211ENST00000413186 OR8I2Q8N0Y5 310 aa7.17□□□□□ -1.26
SYNE1-211ENST00000413186 OR1L1Q8NH94 360 aa7.17□□□□□ -1.26
SYNE1-211ENST00000413186 MARVELD3Q96A59 401 aa7.17□□□□□ -1.26
SYNE1-211ENST00000413186 A0A1B0GU03 582 aa7.17□□□□□ -1.26
SYNE1-211ENST00000413186 CGAP01215 116 aa7.17□□□□□ -1.26
SYNE1-211ENST00000413186 RCC1P18754 421 aaPredicted RBP7.17□□□□□ -1.26
SYNE1-211ENST00000413186 SP5Q6BEB4 398 aaPredicted RBP7.17□□□□□ -1.26
SYNE1-211ENST00000413186 R3HDM4Q96D70 268 aa7.17□□□□□ -1.26
SYNE1-211ENST00000413186 NEU1Q99519 415 aa7.17□□□□□ -1.26
SYNE1-211ENST00000413186 NDFIP1Q9BT67 221 aa7.17□□□□□ -1.26
SYNE1-211ENST00000413186 CLEC7AQ9BXN2 247 aa7.17□□□□□ -1.26
SYNE1-211ENST00000413186 TMEM191AQ9H0A3 160 aa7.17□□□□□ -1.26
SYNE1-211ENST00000413186 HSPB7Q9UBY9 170 aa7.17□□□□□ -1.26
SYNE1-211ENST00000413186 CLEC18AA5D8T8 446 aa7.17□□□□□ -1.26
SYNE1-211ENST00000413186 MPDU1O75352 247 aa7.17□□□□□ -1.26
SYNE1-211ENST00000413186 PF4V1P10720 104 aa7.17□□□□□ -1.26
SYNE1-211ENST00000413186 DCAF12L2Q5VW00 463 aa7.17□□□□□ -1.26
SYNE1-211ENST00000413186 TMEM88Q6PEY1 159 aa7.17□□□□□ -1.26
SYNE1-211ENST00000413186 FAM89BQ8N5H3 189 aa7.17□□□□□ -1.26
SYNE1-211ENST00000413186 CLEC18CQ8NCF0 446 aa7.17□□□□□ -1.26
SYNE1-211ENST00000413186 MOB3AQ96BX8 217 aa7.17□□□□□ -1.26
SYNE1-211ENST00000413186 GPR146Q96CH1 333 aa7.17□□□□□ -1.26
SYNE1-211ENST00000413186 PARP12Q9H0J9 701 aaKnown RBP7.17□□□□□ -1.26
SYNE1-211ENST00000413186 LINC00312Q9Y6C7 94 aa7.17□□□□□ -1.26
SYNE1-211ENST00000413186 VPS13AQ96RL7 3174 aa7.17□□□□□ -1.26
SYNE1-211ENST00000413186 CFPP27918 469 aa7.17□□□□□ -1.26
SYNE1-211ENST00000413186 OR8G2PQ6IF36 304 aa7.17□□□□□ -1.26
SYNE1-211ENST00000413186 ZNF562Q6V9R5 426 aa7.17□□□□□ -1.26
SYNE1-211ENST00000413186 NIT1Q86X76 327 aa7.17□□□□□ -1.26
SYNE1-211ENST00000413186 TMEM186Q96B77 213 aa7.17□□□□□ -1.26
SYNE1-211ENST00000413186 RPUSD4Q96CM3 377 aaKnown RBP7.17□□□□□ -1.26
SYNE1-211ENST00000413186 NPVFQ9HCQ7 196 aa7.17□□□□□ -1.26
SYNE1-211ENST00000413186 THYN1Q9P016 225 aa7.17□□□□□ -1.26
SYNE1-211ENST00000413186 MOB4Q9Y3A3 225 aa7.17□□□□□ -1.26
SYNE1-211ENST00000413186 WDFY4Q6ZS81 3184 aa7.16□□□□□ -1.26
SYNE1-211ENST00000413186 A6NNC1 897 aa7.16□□□□□ -1.26
SYNE1-211ENST00000413186 E7EQL1 145 aa7.16□□□□□ -1.26
SYNE1-211ENST00000413186 ARG1P05089 322 aa7.16□□□□□ -1.26
SYNE1-211ENST00000413186 CD99P14209 185 aa7.16□□□□□ -1.26
SYNE1-211ENST00000413186 LCN15Q6UWW0 184 aa7.16□□□□□ -1.26
SYNE1-211ENST00000413186 ZNF600Q6ZNG1 722 aa7.16□□□□□ -1.26
SYNE1-211ENST00000413186 NR2C2APQ86WQ0 139 aa7.16□□□□□ -1.26
SYNE1-211ENST00000413186 FAM216BQ8N7L0 139 aa7.16□□□□□ -1.26
SYNE1-211ENST00000413186 SMDT1Q9H4I9 107 aa7.16□□□□□ -1.26
SYNE1-211ENST00000413186 CEP295Q9C0D2 2601 aa7.16□□□□□ -1.26
SYNE1-211ENST00000413186 CD8AP01732 235 aa7.16□□□□□ -1.26
SYNE1-211ENST00000413186 MGPP08493 103 aa7.16□□□□□ -1.26
SYNE1-211ENST00000413186 ZP1P60852 638 aa7.16□□□□□ -1.26
SYNE1-211ENST00000413186 TMEM255AQ5JRV8 349 aa7.16□□□□□ -1.26
SYNE1-211ENST00000413186 OVCH2Q7RTZ1 564 aa7.16□□□□□ -1.26
SYNE1-211ENST00000413186 ZNF429Q86V71 674 aa7.16□□□□□ -1.26
SYNE1-211ENST00000413186 RAB24Q969Q5 203 aa7.16□□□□□ -1.26
SYNE1-211ENST00000413186 SLC25A28Q96A46 364 aa7.16□□□□□ -1.26
SYNE1-211ENST00000413186 HARBI1Q96MB7 349 aa7.16□□□□□ -1.26
SYNE1-211ENST00000413186 RASL11BQ9BPW5 248 aa7.16□□□□□ -1.26
SYNE1-211ENST00000413186 PRNDQ9UKY0 176 aa7.16□□□□□ -1.26
SYNE1-211ENST00000413186 SPTBN4Q9H254 2564 aa7.16□□□□□ -1.26
SYNE1-211ENST00000413186 ADAP1O75689 374 aa7.16□□□□□ -1.26
SYNE1-211ENST00000413186 SEC11BP0C7V7 166 aa7.16□□□□□ -1.26
SYNE1-211ENST00000413186 NMUP48645 174 aa7.16□□□□□ -1.26
SYNE1-211ENST00000413186 PMS2P11Q13670 270 aa7.16□□□□□ -1.26
SYNE1-211ENST00000413186 ZNF146Q15072 292 aa7.16□□□□□ -1.26
SYNE1-211ENST00000413186 ABHD12Q8N2K0 398 aa7.16□□□□□ -1.26
SYNE1-211ENST00000413186 LHX4Q969G2 390 aa7.16□□□□□ -1.26
SYNE1-211ENST00000413186 UBE2L5PA0A1B0GUS4 154 aa7.16□□□□□ -1.26
SYNE1-211ENST00000413186 A8MWL6 223 aa7.16□□□□□ -1.26
SYNE1-211ENST00000413186 SIGLEC5O15389 551 aa7.16□□□□□ -1.26
SYNE1-211ENST00000413186 NXPH3O95157 252 aa7.16□□□□□ -1.26
SYNE1-211ENST00000413186 TAS2R45P59539 299 aa7.16□□□□□ -1.26
SYNE1-211ENST00000413186 SPCS3P61009 180 aa7.16□□□□□ -1.26
SYNE1-211ENST00000413186 FAM201AQ5SY85 155 aa7.16□□□□□ -1.26
SYNE1-211ENST00000413186 RTN4RL2Q86UN3 420 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms