RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 A0A0U1RQK1 487 aa5.32□□□□□ -1.56
VPS41-204ENST00000413141 KANTRA0A1W2PQU2 76 aa5.32□□□□□ -1.56
VPS41-204ENST00000413141 FAM24AA6NFZ4 105 aa5.32□□□□□ -1.56
VPS41-204ENST00000413141 CEBPZOSA8MTT3 80 aa5.32□□□□□ -1.56
VPS41-204ENST00000413141 NBR2O15453 112 aa5.32□□□□□ -1.56
VPS41-204ENST00000413141 NDUFA3O95167 84 aa5.32□□□□□ -1.56
VPS41-204ENST00000413141 FSHBP01225 129 aa5.32□□□□□ -1.56
VPS41-204ENST00000413141 MYOD1P15172 320 aa5.32□□□□□ -1.56
VPS41-204ENST00000413141 CD24P25063 80 aa5.32□□□□□ -1.56
VPS41-204ENST00000413141 BRS3P32247 399 aa5.32□□□□□ -1.56
VPS41-204ENST00000413141 VDAC2P45880 294 aaPredicted RBP5.32□□□□□ -1.56
VPS41-204ENST00000413141 HOXA1P49639 335 aaPredicted RBP5.32□□□□□ -1.56
VPS41-204ENST00000413141 DYNLT3P51808 116 aa5.32□□□□□ -1.56
VPS41-204ENST00000413141 HSPE1P61604 102 aaKnown RBP5.32□□□□□ -1.56
VPS41-204ENST00000413141 RPL23AP62750 156 aaKnown RBP5.32□□□□□ -1.56
VPS41-204ENST00000413141 PRCDQ00LT1 54 aa5.32□□□□□ -1.56
VPS41-204ENST00000413141 IFITM2Q01629 132 aa5.32□□□□□ -1.56
VPS41-204ENST00000413141 BAXQ07812 192 aa5.32□□□□□ -1.56
VPS41-204ENST00000413141 TMEM267Q0VDI3 215 aaPredicted RBP5.32□□□□□ -1.56
VPS41-204ENST00000413141 EBI3Q14213 229 aa5.32□□□□□ -1.56
VPS41-204ENST00000413141 HES1Q14469 280 aa5.32□□□□□ -1.56
VPS41-204ENST00000413141 MMDQ15546 238 aa5.32□□□□□ -1.56
VPS41-204ENST00000413141 LINC01559Q495D7 138 aa5.32□□□□□ -1.56
VPS41-204ENST00000413141 CYB5R2Q6BCY4 276 aa5.32□□□□□ -1.56
VPS41-204ENST00000413141 TMEM252Q8N6L7 170 aa5.32□□□□□ -1.56
VPS41-204ENST00000413141 TEX45Q8NA69 505 aa5.32□□□□□ -1.56
VPS41-204ENST00000413141 NPBQ8NG41 125 aa5.32□□□□□ -1.56
VPS41-204ENST00000413141 OR2T10Q8NGZ9 312 aa5.32□□□□□ -1.56
VPS41-204ENST00000413141 OR5B3Q8NH48 314 aa5.32□□□□□ -1.56
VPS41-204ENST00000413141 EAF1Q96JC9 268 aaPredicted RBP5.32□□□□□ -1.56
VPS41-204ENST00000413141 SMIM8Q96KF7 97 aa5.32□□□□□ -1.56
VPS41-204ENST00000413141 CIB3Q96Q77 187 aaPredicted RBP5.32□□□□□ -1.56
VPS41-204ENST00000413141 OR4C12Q96R67 309 aa5.32□□□□□ -1.56
VPS41-204ENST00000413141 ARPC5LQ9BPX5 153 aa5.32□□□□□ -1.56
VPS41-204ENST00000413141 GON7Q9BXV9 100 aa5.32□□□□□ -1.56
VPS41-204ENST00000413141 SLC25A31Q9H0C2 315 aa5.32□□□□□ -1.56
VPS41-204ENST00000413141 FBXL15Q9H469 300 aa5.32□□□□□ -1.56
VPS41-204ENST00000413141 SLA2Q9H6Q3 261 aa5.32□□□□□ -1.56
VPS41-204ENST00000413141 ZNF430Q9H8G1 570 aaPredicted RBP5.32□□□□□ -1.56
VPS41-204ENST00000413141 ZC4H2Q9NQZ6 224 aa5.32□□□□□ -1.56
VPS41-204ENST00000413141 FKBP11Q9NYL4 201 aa5.32□□□□□ -1.56
VPS41-204ENST00000413141 PSENENQ9NZ42 101 aa5.32□□□□□ -1.56
VPS41-204ENST00000413141 METTL1Q9UBP6 276 aaKnown RBP5.32□□□□□ -1.56
VPS41-204ENST00000413141 FBXL17Q9UF56 701 aa5.32□□□□□ -1.56
VPS41-204ENST00000413141 SIGLEC9Q9Y336 463 aa5.32□□□□□ -1.56
VPS41-204ENST00000413141 ITPR2Q14571 2701 aa5.32□□□□□ -1.56
VPS41-204ENST00000413141 MED13LQ71F56 2210 aa5.31□□□□□ -1.56
VPS41-204ENST00000413141 TEX50A0A1B0GTY4 177 aa5.31□□□□□ -1.56
VPS41-204ENST00000413141 CGB1A6NKQ9 187 aa5.31□□□□□ -1.56
VPS41-204ENST00000413141 RRHO14718 337 aa5.31□□□□□ -1.56
VPS41-204ENST00000413141 RGS13O14921 159 aa5.31□□□□□ -1.56
VPS41-204ENST00000413141 SMAD7O15105 426 aaKnown RBP5.31□□□□□ -1.56
VPS41-204ENST00000413141 LY86O95711 162 aa5.31□□□□□ -1.56
VPS41-204ENST00000413141 OPN1MWP04001 364 aa5.31□□□□□ -1.56
VPS41-204ENST00000413141 FBP1P09467 338 aa5.31□□□□□ -1.56
VPS41-204ENST00000413141 FAM106CPP0CH98 169 aa5.31□□□□□ -1.56
VPS41-204ENST00000413141 OPN1MW2P0DN77 364 aa5.31□□□□□ -1.56
VPS41-204ENST00000413141 OPN1MW3P0DN78 364 aa5.31□□□□□ -1.56
VPS41-204ENST00000413141 TMEM11P17152 192 aa5.31□□□□□ -1.56
VPS41-204ENST00000413141 MAS1LP35410 378 aa5.31□□□□□ -1.56
VPS41-204ENST00000413141 SULT1A1P50225 295 aa5.31□□□□□ -1.56
VPS41-204ENST00000413141 F2RL1P55085 397 aa5.31□□□□□ -1.56
VPS41-204ENST00000413141 UBA52P62987 128 aaKnown RBP5.31□□□□□ -1.56
VPS41-204ENST00000413141 PJVKQ0ZLH3 352 aa5.31□□□□□ -1.56
VPS41-204ENST00000413141 HNF4GQ14541 408 aa5.31□□□□□ -1.56
VPS41-204ENST00000413141 PRSS8Q16651 343 aa5.31□□□□□ -1.56
VPS41-204ENST00000413141 SPANXN5Q5MJ07 72 aa5.31□□□□□ -1.56
VPS41-204ENST00000413141 C10orf55Q5SWW7 151 aa5.31□□□□□ -1.56
VPS41-204ENST00000413141 FAM120AOSQ5T036 256 aa5.31□□□□□ -1.56
VPS41-204ENST00000413141 CLEC9AQ6UXN8 241 aa5.31□□□□□ -1.56
VPS41-204ENST00000413141 TMEM14EPQ6UXP3 125 aa5.31□□□□□ -1.56
VPS41-204ENST00000413141 PPP1R27Q86WC6 154 aa5.31□□□□□ -1.56
VPS41-204ENST00000413141 STX12Q86Y82 276 aa5.31□□□□□ -1.56
VPS41-204ENST00000413141 MMD2Q8IY49 270 aa5.31□□□□□ -1.56
VPS41-204ENST00000413141 STPG2Q8N412 459 aa5.31□□□□□ -1.56
VPS41-204ENST00000413141 BSCL2Q96G97 398 aaPredicted RBP5.31□□□□□ -1.56
VPS41-204ENST00000413141 CLCC1Q96S66 551 aa5.31□□□□□ -1.56
VPS41-204ENST00000413141 COMMD5Q9GZQ3 224 aa5.31□□□□□ -1.56
VPS41-204ENST00000413141 MEGF9Q9H1U4 602 aa5.31□□□□□ -1.56
VPS41-204ENST00000413141 PLEKHA3Q9HB20 300 aa5.31□□□□□ -1.56
VPS41-204ENST00000413141 NDUFA4L2Q9NRX3 87 aa5.31□□□□□ -1.56
VPS41-204ENST00000413141 KIAA1456Q9P272 454 aa5.31□□□□□ -1.56
VPS41-204ENST00000413141 ZNF469Q96JG9 3925 aaPredicted RBP5.31□□□□□ -1.56
VPS41-204ENST00000413141 AKAP9Q99996 3911 aa5.3□□□□□ -1.56
VPS41-204ENST00000413141 WNK2Q9Y3S1 2297 aa5.3□□□□□ -1.56
VPS41-204ENST00000413141 CCDC168Q8NDH2 2452 aa5.3□□□□□ -1.56
VPS41-204ENST00000413141 A0A1B0GW64 132 aa5.3□□□□□ -1.56
VPS41-204ENST00000413141 A0A1W2PN81 502 aa5.3□□□□□ -1.56
VPS41-204ENST00000413141 C15orf62A8K5M9 175 aa5.3□□□□□ -1.56
VPS41-204ENST00000413141 E7EUB6 86 aa5.3□□□□□ -1.56
VPS41-204ENST00000413141 INS-IGF2F8WCM5 200 aa5.3□□□□□ -1.56
VPS41-204ENST00000413141 TAAR5O14804 337 aa5.3□□□□□ -1.56
VPS41-204ENST00000413141 CST7O76096 145 aa5.3□□□□□ -1.56
VPS41-204ENST00000413141 CA2P00918 260 aa5.3□□□□□ -1.56
VPS41-204ENST00000413141 METTL15P1P0C7V9 234 aa5.3□□□□□ -1.56
VPS41-204ENST00000413141 CHRNA7P36544 502 aa5.3□□□□□ -1.56
VPS41-204ENST00000413141 COMPP49747 757 aaPredicted RBP5.3□□□□□ -1.56
VPS41-204ENST00000413141 BPIFB3P59826 476 aa5.3□□□□□ -1.56
VPS41-204ENST00000413141 GNB1P62873 340 aa5.3□□□□□ -1.56
VPS41-204ENST00000413141 SSBP2P81877 361 aaPredicted RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms