RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 PLPPR1Q8TBJ4 325 aa11.69□□□□□ -0.54
CLTCL1-201ENST00000412649 PRNDQ9UKY0 176 aa11.69□□□□□ -0.54
CLTCL1-201ENST00000412649 CHCHD2Q9Y6H1 151 aaPredicted RBP11.69□□□□□ -0.54
CLTCL1-201ENST00000412649 TRAV24A0A0B4J272 114 aa11.69□□□□□ -0.54
CLTCL1-201ENST00000412649 CIDEAO60543 219 aa11.69□□□□□ -0.54
CLTCL1-201ENST00000412649 FAM87AP0C7U9 286 aa11.69□□□□□ -0.54
CLTCL1-201ENST00000412649 C8orf88P0DMB2 117 aa11.69□□□□□ -0.54
CLTCL1-201ENST00000412649 PSG1P11464 419 aa11.69□□□□□ -0.54
CLTCL1-201ENST00000412649 CEBPDP49716 269 aaPredicted RBP11.69□□□□□ -0.54
CLTCL1-201ENST00000412649 RNPS1Q15287 305 aaKnown RBP11.69□□□□□ -0.54
CLTCL1-201ENST00000412649 ZNF718Q3SXZ3 478 aa11.69□□□□□ -0.54
CLTCL1-201ENST00000412649 RNASE8Q8TDE3 154 aaKnown RBP11.69□□□□□ -0.54
CLTCL1-201ENST00000412649 ST20Q9HBF5 79 aa11.69□□□□□ -0.54
CLTCL1-201ENST00000412649 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.69□□□□□ -0.54
CLTCL1-201ENST00000412649 J3QR06 171 aa11.69□□□□□ -0.54
CLTCL1-201ENST00000412649 LINC00271P0C7V0 271 aa11.69□□□□□ -0.54
CLTCL1-201ENST00000412649 COMPP49747 757 aaPredicted RBP11.69□□□□□ -0.54
CLTCL1-201ENST00000412649 TDRG1Q3Y452 100 aa11.69□□□□□ -0.54
CLTCL1-201ENST00000412649 MPV17L2Q567V2 206 aa11.69□□□□□ -0.54
CLTCL1-201ENST00000412649 OCIAD2Q56VL3 154 aa11.69□□□□□ -0.54
CLTCL1-201ENST00000412649 C10orf113Q5VZT2 155 aa11.69□□□□□ -0.54
CLTCL1-201ENST00000412649 TRGV10A0A0A0MS01 117 aa11.68□□□□□ -0.54
CLTCL1-201ENST00000412649 C9JCJ5 164 aa11.68□□□□□ -0.54
CLTCL1-201ENST00000412649 ENSAO43768 121 aaKnown RBP11.68□□□□□ -0.54
CLTCL1-201ENST00000412649 GPR6P46095 362 aaPredicted RBP11.68□□□□□ -0.54
CLTCL1-201ENST00000412649 ARF6P62330 175 aa11.68□□□□□ -0.54
CLTCL1-201ENST00000412649 PLGLAQ15195 96 aa11.68□□□□□ -0.54
CLTCL1-201ENST00000412649 RAB1CQ92928 201 aa11.68□□□□□ -0.54
CLTCL1-201ENST00000412649 SFXN3Q9BWM7 321 aa11.68□□□□□ -0.54
CLTCL1-201ENST00000412649 CST9LQ9H4G1 147 aa11.68□□□□□ -0.54
CLTCL1-201ENST00000412649 TMEM140Q9NV12 185 aa11.68□□□□□ -0.54
CLTCL1-201ENST00000412649 LMO1P25800 156 aa11.68□□□□□ -0.54
CLTCL1-201ENST00000412649 TMEM97Q5BJF2 176 aa11.68□□□□□ -0.54
CLTCL1-201ENST00000412649 SSC4DQ8WTU2 575 aa11.68□□□□□ -0.54
CLTCL1-201ENST00000412649 A0A1W2PS18 150 aa11.68□□□□□ -0.54
CLTCL1-201ENST00000412649 CCL25O15444 150 aa11.68□□□□□ -0.54
CLTCL1-201ENST00000412649 NUPR1O60356 82 aa11.68□□□□□ -0.54
CLTCL1-201ENST00000412649 TCTAP57738 103 aa11.68□□□□□ -0.54
CLTCL1-201ENST00000412649 LRRC29Q8WV35 223 aa11.68□□□□□ -0.54
CLTCL1-201ENST00000412649 ZIC3O60481 467 aa11.67□□□□□ -0.54
CLTCL1-201ENST00000412649 CD46P15529 392 aa11.67□□□□□ -0.54
CLTCL1-201ENST00000412649 ORM2P19652 201 aa11.67□□□□□ -0.54
CLTCL1-201ENST00000412649 S100A7AQ86SG5 101 aa11.67□□□□□ -0.54
CLTCL1-201ENST00000412649 GRAMD2BQ96HH9 432 aa11.67□□□□□ -0.54
CLTCL1-201ENST00000412649 ZPBPQ9BS86 351 aa11.67□□□□□ -0.54
CLTCL1-201ENST00000412649 CXXC4Q9H2H0 198 aa11.67□□□□□ -0.54
CLTCL1-201ENST00000412649 KIAA1549LQ6ZVL6 1849 aa11.67□□□□□ -0.54
CLTCL1-201ENST00000412649 FAM181BA6NEQ2 426 aa11.67□□□□□ -0.54
CLTCL1-201ENST00000412649 C12orf77C9JDV5 145 aa11.67□□□□□ -0.54
CLTCL1-201ENST00000412649 M0QZ24 198 aa11.67□□□□□ -0.54
CLTCL1-201ENST00000412649 ZFP36L1Q07352 338 aaKnown RBP11.67□□□□□ -0.54
CLTCL1-201ENST00000412649 RIGQ13278 110 aa11.67□□□□□ -0.54
CLTCL1-201ENST00000412649 VKORC1L1Q8N0U8 176 aa11.67□□□□□ -0.54
CLTCL1-201ENST00000412649 KLRC4-KLRK1H3BQV0 150 aa11.67□□□□□ -0.54
CLTCL1-201ENST00000412649 MMP23AO75900 390 aa11.67□□□□□ -0.54
CLTCL1-201ENST00000412649 GPR183P32249 361 aa11.67□□□□□ -0.54
CLTCL1-201ENST00000412649 HBBP68871 147 aa11.67□□□□□ -0.54
CLTCL1-201ENST00000412649 OR51B2Q9Y5P1 312 aa11.67□□□□□ -0.54
CLTCL1-201ENST00000412649 DIDO1Q9BTC0 2240 aaKnown RBP11.67□□□□□ -0.54
CLTCL1-201ENST00000412649 IGKV1-6A0A0C4DH72 117 aa11.67□□□□□ -0.54
CLTCL1-201ENST00000412649 A0A1B0GV72 72 aa11.67□□□□□ -0.54
CLTCL1-201ENST00000412649 RBFOX2O43251 390 aaKnown RBP eCLIP11.67□□□□□ -0.54
CLTCL1-201ENST00000412649 CXCL12P48061 93 aa11.67□□□□□ -0.54
CLTCL1-201ENST00000412649 CX3CL1P78423 397 aa11.67□□□□□ -0.54
CLTCL1-201ENST00000412649 TBR1Q16650 682 aa11.67□□□□□ -0.54
CLTCL1-201ENST00000412649 MIR17HGQ75NE6 70 aa11.67□□□□□ -0.54
CLTCL1-201ENST00000412649 HAPLN4Q86UW8 402 aa11.67□□□□□ -0.54
CLTCL1-201ENST00000412649 WDR54Q9H977 334 aa11.67□□□□□ -0.54
CLTCL1-201ENST00000412649 NMUP48645 174 aa11.66□□□□□ -0.54
CLTCL1-201ENST00000412649 IL11RAQ14626 422 aa11.66□□□□□ -0.54
CLTCL1-201ENST00000412649 SAMD13Q5VXD3 122 aa11.66□□□□□ -0.54
CLTCL1-201ENST00000412649 PGLYRP4Q96LB8 373 aa11.66□□□□□ -0.54
CLTCL1-201ENST00000412649 SNAI2O43623 268 aa11.66□□□□□ -0.54
CLTCL1-201ENST00000412649 CEACAM8P31997 349 aaPredicted RBP11.66□□□□□ -0.54
CLTCL1-201ENST00000412649 CA7P43166 264 aa11.66□□□□□ -0.54
CLTCL1-201ENST00000412649 CLEC5AQ9NY25 188 aa11.66□□□□□ -0.54
CLTCL1-201ENST00000412649 GFRA1P56159 465 aa11.66□□□□□ -0.54
CLTCL1-201ENST00000412649 HSPE1P61604 102 aaKnown RBP11.66□□□□□ -0.54
CLTCL1-201ENST00000412649 RPL8P62917 257 aaKnown RBP11.66□□□□□ -0.54
CLTCL1-201ENST00000412649 MAJINQ3KP22 176 aa11.66□□□□□ -0.54
CLTCL1-201ENST00000412649 HES3Q5TGS1 186 aa11.66□□□□□ -0.54
CLTCL1-201ENST00000412649 WDR31Q8NA23 367 aa11.66□□□□□ -0.54
CLTCL1-201ENST00000412649 DEFB108BQ8NET1 73 aa11.66□□□□□ -0.54
CLTCL1-201ENST00000412649 C19orf24Q9BVV8 132 aa11.66□□□□□ -0.54
CLTCL1-201ENST00000412649 C7orf71A4D174 169 aa11.66□□□□□ -0.54
CLTCL1-201ENST00000412649 PPIAL4DF5H284 164 aa11.66□□□□□ -0.54
CLTCL1-201ENST00000412649 STXBP6Q8NFX7 210 aa11.66□□□□□ -0.54
CLTCL1-201ENST00000412649 TSKUQ8WUA8 353 aa11.66□□□□□ -0.54
CLTCL1-201ENST00000412649 LY96Q9Y6Y9 160 aa11.66□□□□□ -0.54
CLTCL1-201ENST00000412649 IL18BPO95998 194 aa11.65□□□□□ -0.54
CLTCL1-201ENST00000412649 IGLV3-1P01715 115 aa11.65□□□□□ -0.54
CLTCL1-201ENST00000412649 IGFBP2P18065 325 aa11.65□□□□□ -0.54
CLTCL1-201ENST00000412649 EFNB3Q15768 340 aa11.65□□□□□ -0.54
CLTCL1-201ENST00000412649 ZNF114Q8NC26 417 aa11.65□□□□□ -0.54
CLTCL1-201ENST00000412649 CLEC7AQ9BXN2 247 aa11.65□□□□□ -0.54
CLTCL1-201ENST00000412649 THSD7BQ9C0I4 1608 aa11.65□□□□□ -0.54
CLTCL1-201ENST00000412649 HIST1H1AQ02539 215 aaPredicted RBP11.65□□□□□ -0.54
CLTCL1-201ENST00000412649 ZNF766Q5HY98 468 aa11.65□□□□□ -0.54
CLTCL1-201ENST00000412649 ZIC4Q8N9L1 334 aa11.65□□□□□ -0.54
CLTCL1-201ENST00000412649 SLC25A40Q8TBP6 338 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms