RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 PATZ1Q9HBE1 687 aaKnown RBP9.42□□□□□ -0.9
TRAFD1-202ENST00000412615 TP53TG5Q9Y2B4 290 aa9.42□□□□□ -0.9
TRAFD1-202ENST00000412615 LSM4Q9Y4Z0 139 aaKnown RBP9.42□□□□□ -0.9
TRAFD1-202ENST00000412615 DMXL1Q9Y485 3027 aa9.42□□□□□ -0.9
TRAFD1-202ENST00000412615 VSTM5A8MXK1 200 aa9.42□□□□□ -0.9
TRAFD1-202ENST00000412615 H7BYZ3 331 aa9.42□□□□□ -0.9
TRAFD1-202ENST00000412615 S100PP25815 95 aa9.42□□□□□ -0.9
TRAFD1-202ENST00000412615 RAB31Q13636 194 aa9.42□□□□□ -0.9
TRAFD1-202ENST00000412615 GFRALQ6UXV0 394 aa9.42□□□□□ -0.9
TRAFD1-202ENST00000412615 TGIF2LYQ8IUE0 185 aa9.42□□□□□ -0.9
TRAFD1-202ENST00000412615 ANAPC16Q96DE5 110 aa9.42□□□□□ -0.9
TRAFD1-202ENST00000412615 TXNDC17Q9BRA2 123 aa9.42□□□□□ -0.9
TRAFD1-202ENST00000412615 SLC35D1Q9NTN3 355 aa9.42□□□□□ -0.9
TRAFD1-202ENST00000412615 OR51B2Q9Y5P1 312 aa9.42□□□□□ -0.9
TRAFD1-202ENST00000412615 HCFC1P51610 2035 aa9.42□□□□□ -0.9
TRAFD1-202ENST00000412615 PFN1P07737 140 aaKnown RBP9.41□□□□□ -0.9
TRAFD1-202ENST00000412615 CT45A6P0DMU7 189 aa9.41□□□□□ -0.9
TRAFD1-202ENST00000412615 CT45A5P0DMU8 189 aa9.41□□□□□ -0.9
TRAFD1-202ENST00000412615 CT45A7P0DMV0 189 aa9.41□□□□□ -0.9
TRAFD1-202ENST00000412615 MEF2CQ06413 473 aaPredicted RBP9.41□□□□□ -0.9
TRAFD1-202ENST00000412615 BSPH1Q075Z2 132 aa9.41□□□□□ -0.9
TRAFD1-202ENST00000412615 MIC13Q5XKP0 118 aa9.41□□□□□ -0.9
TRAFD1-202ENST00000412615 TEPPQ6URK8 271 aa9.41□□□□□ -0.9
TRAFD1-202ENST00000412615 NIT2Q9NQR4 276 aa9.41□□□□□ -0.9
TRAFD1-202ENST00000412615 SLC25A10Q9UBX3 287 aaPredicted RBP9.41□□□□□ -0.9
TRAFD1-202ENST00000412615 ZNF257Q9Y2Q1 563 aa9.41□□□□□ -0.9
TRAFD1-202ENST00000412615 CXorf1O96002 111 aa9.41□□□□□ -0.9
TRAFD1-202ENST00000412615 CA2P00918 260 aa9.41□□□□□ -0.9
TRAFD1-202ENST00000412615 IL6RP08887 468 aaPredicted RBP9.41□□□□□ -0.9
TRAFD1-202ENST00000412615 STAG3L2P0CL84 134 aa9.41□□□□□ -0.9
TRAFD1-202ENST00000412615 STAG3L3P0CL85 134 aa9.41□□□□□ -0.9
TRAFD1-202ENST00000412615 CST9LP1Q5W188 147 aa9.41□□□□□ -0.9
TRAFD1-202ENST00000412615 SNRNP40Q96DI7 357 aaKnown RBP9.41□□□□□ -0.9
TRAFD1-202ENST00000412615 PYGO2Q9BRQ0 406 aa9.41□□□□□ -0.9
TRAFD1-202ENST00000412615 HINT2Q9BX68 163 aa9.41□□□□□ -0.9
TRAFD1-202ENST00000412615 F6UZH7 168 aa9.4□□□□□ -0.9
TRAFD1-202ENST00000412615 J3QR06 171 aa9.4□□□□□ -0.9
TRAFD1-202ENST00000412615 UPK2O00526 184 aa9.4□□□□□ -0.9
TRAFD1-202ENST00000412615 THBDP07204 575 aa9.4□□□□□ -0.9
TRAFD1-202ENST00000412615 TRGC1P0CF51 173 aa9.4□□□□□ -0.9
TRAFD1-202ENST00000412615 GALR1P47211 349 aa9.4□□□□□ -0.9
TRAFD1-202ENST00000412615 B2MP61769 119 aa9.4□□□□□ -0.9
TRAFD1-202ENST00000412615 RPL31P62899 125 aaKnown RBP9.4□□□□□ -0.9
TRAFD1-202ENST00000412615 ARSJQ5FYB0 599 aaPredicted RBP9.4□□□□□ -0.9
TRAFD1-202ENST00000412615 FRZBQ92765 325 aa9.4□□□□□ -0.9
TRAFD1-202ENST00000412615 PLEKHA3Q9HB20 300 aa9.4□□□□□ -0.9
TRAFD1-202ENST00000412615 FKBP11Q9NYL4 201 aa9.4□□□□□ -0.9
TRAFD1-202ENST00000412615 JKAMPQ9P055 326 aa9.4□□□□□ -0.9
TRAFD1-202ENST00000412615 PPIAL4EA0A075B759 164 aa9.4□□□□□ -0.9
TRAFD1-202ENST00000412615 FNDC10F2Z333 226 aa9.4□□□□□ -0.9
TRAFD1-202ENST00000412615 PPIAL4DF5H284 164 aa9.4□□□□□ -0.9
TRAFD1-202ENST00000412615 PPIAL4FP0DN26 164 aa9.4□□□□□ -0.9
TRAFD1-202ENST00000412615 NPPCP23582 126 aa9.4□□□□□ -0.9
TRAFD1-202ENST00000412615 S100A2P29034 98 aa9.4□□□□□ -0.9
TRAFD1-202ENST00000412615 ATP5IP56385 69 aaPredicted RBP9.4□□□□□ -0.9
TRAFD1-202ENST00000412615 UBE2G2P60604 165 aa9.4□□□□□ -0.9
TRAFD1-202ENST00000412615 SPNS3Q6ZMD2 512 aa9.4□□□□□ -0.9
TRAFD1-202ENST00000412615 Q8NA96 180 aa9.4□□□□□ -0.9
TRAFD1-202ENST00000412615 OR51G1Q8NGK1 321 aa9.4□□□□□ -0.9
TRAFD1-202ENST00000412615 ABHD5Q8WTS1 349 aa9.4□□□□□ -0.9
TRAFD1-202ENST00000412615 SSMEM1Q8WWF3 244 aa9.4□□□□□ -0.9
TRAFD1-202ENST00000412615 SRD5A3Q9H8P0 318 aa9.4□□□□□ -0.9
TRAFD1-202ENST00000412615 SAP30LQ9HAJ7 183 aa9.4□□□□□ -0.9
TRAFD1-202ENST00000412615 GAR1Q9NY12 217 aaKnown RBP9.4□□□□□ -0.9
TRAFD1-202ENST00000412615 SH3BGRL2Q9UJC5 107 aa9.4□□□□□ -0.9
TRAFD1-202ENST00000412615 PPIAL4AQ9Y536 164 aa9.4□□□□□ -0.9
TRAFD1-202ENST00000412615 ELOA3CA0A087WX78 387 aaPredicted RBP9.39□□□□□ -0.91
TRAFD1-202ENST00000412615 PPP1R2P9O14990 202 aa9.39□□□□□ -0.91
TRAFD1-202ENST00000412615 ARL14EPLP0DKL9 152 aa9.39□□□□□ -0.91
TRAFD1-202ENST00000412615 RPL29P47914 159 aaKnown RBP9.39□□□□□ -0.91
TRAFD1-202ENST00000412615 ATP5G3P48201 142 aa9.39□□□□□ -0.91
TRAFD1-202ENST00000412615 PRCDQ00LT1 54 aa9.39□□□□□ -0.91
TRAFD1-202ENST00000412615 C1orf159Q96HA4 380 aa9.39□□□□□ -0.91
TRAFD1-202ENST00000412615 DYSFO75923 2080 aa9.39□□□□□ -0.91
TRAFD1-202ENST00000412615 DSCAML1Q8TD84 2053 aa9.39□□□□□ -0.91
TRAFD1-202ENST00000412615 ZNF292O60281 2723 aa9.39□□□□□ -0.91
TRAFD1-202ENST00000412615 IGKV1-16P04430 117 aa9.39□□□□□ -0.91
TRAFD1-202ENST00000412615 RHOBP62745 196 aa9.39□□□□□ -0.91
TRAFD1-202ENST00000412615 GNB1P62873 340 aa9.39□□□□□ -0.91
TRAFD1-202ENST00000412615 ZNF833PQ6ZTB9 187 aa9.39□□□□□ -0.91
TRAFD1-202ENST00000412615 ZCCHC24Q8N2G6 241 aaKnown RBP9.39□□□□□ -0.91
TRAFD1-202ENST00000412615 NECAP1Q8NC96 275 aa9.39□□□□□ -0.91
TRAFD1-202ENST00000412615 ZNF714Q96N38 554 aa9.39□□□□□ -0.91
TRAFD1-202ENST00000412615 BET1LQ9NYM9 111 aa9.39□□□□□ -0.91
TRAFD1-202ENST00000412615 SSUH2Q9Y2M2 353 aa9.39□□□□□ -0.91
TRAFD1-202ENST00000412615 ZNF835Q9Y2P0 537 aa9.39□□□□□ -0.91
TRAFD1-202ENST00000412615 TMEM178BH3BS89 294 aa9.38□□□□□ -0.91
TRAFD1-202ENST00000412615 STPG3Q8N7X2 389 aa9.38□□□□□ -0.91
TRAFD1-202ENST00000412615 OSR1Q8TAX0 266 aaPredicted RBP9.38□□□□□ -0.91
TRAFD1-202ENST00000412615 NEUROG1Q92886 237 aa9.38□□□□□ -0.91
TRAFD1-202ENST00000412615 NGBQ9NPG2 151 aa9.38□□□□□ -0.91
TRAFD1-202ENST00000412615 RAI1Q7Z5J4 1906 aaPredicted RBP9.38□□□□□ -0.91
TRAFD1-202ENST00000412615 TANC2Q9HCD6 1990 aa9.38□□□□□ -0.91
TRAFD1-202ENST00000412615 IFITM10A6NMD0 228 aa9.38□□□□□ -0.91
TRAFD1-202ENST00000412615 SRRM4A7MD48 611 aaKnown RBP9.38□□□□□ -0.91
TRAFD1-202ENST00000412615 PPP5D1E7EU14 171 aa9.38□□□□□ -0.91
TRAFD1-202ENST00000412615 PHOX2AO14813 284 aa9.38□□□□□ -0.91
TRAFD1-202ENST00000412615 NDUFB4O95168 129 aa9.38□□□□□ -0.91
TRAFD1-202ENST00000412615 APOA2P02652 100 aa9.38□□□□□ -0.91
TRAFD1-202ENST00000412615 MYOD1P15172 320 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms