RNA–Protein interactions for RNA: ENST00000410694.1

RNU2-48P-201, Transcript of RNA, U2 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU2-48P, Length 191 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-48P-201ENST00000410694 NMNAT1Q9HAN9 279 aaPredicted RBP1.17□□□□□ -2.22
RNU2-48P-201ENST00000410694 NDUFB11Q9NX14 153 aa1.17□□□□□ -2.22
RNU2-48P-201ENST00000410694 OPTCQ9UBM4 332 aa1.17□□□□□ -2.22
RNU2-48P-201ENST00000410694 HHLA3Q9XRX5 114 aa1.17□□□□□ -2.22
RNU2-48P-201ENST00000410694 TIMM22Q9Y584 194 aa1.17□□□□□ -2.22
RNU2-48P-201ENST00000410694 DOCK5Q9H7D0 1870 aa1.17□□□□□ -2.22
RNU2-48P-201ENST00000410694 ITGB4P16144 1822 aa1.17□□□□□ -2.22
RNU2-48P-201ENST00000410694 DICER1Q9UPY3 1922 aaKnown RBP1.17□□□□□ -2.22
RNU2-48P-201ENST00000410694 DSCAMO60469 2012 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 COL4A4P53420 1690 aaPredicted RBP1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 PLXNB1O43157 2135 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 ADAMTSL1Q8N6G6 1762 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 SHANK3Q9BYB0 1731 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 hCG_1818297A0A087WSY0 165 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 TRGV5A0A0B4J1U4 118 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 FAM236DA0A1B0GTK5 79 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 A0A1B0GW54 56 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 A8MT66 165 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 HMSDA8MTL9 139 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 A8MUN3 132 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 C1orf196B1AJZ1 125 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 KPNA3O00505 521 aaPredicted RBP1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 FAAHO00519 579 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 HMGB3O15347 200 aaKnown RBP1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 CST8O60676 142 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 TFPTP0C1Z6 253 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 SULT1A3P0DMM9 295 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 SULT1A4P0DMN0 295 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 P0DMU3 169 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 FAM231AP0DMU4 169 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 FAM231CP0DMU5 169 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 FAM236CP0DP71 79 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 DEFA4P12838 97 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 CSRP1P21291 193 aaKnown RBP1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 HIST1H2BOP23527 126 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 COL8A2P25067 703 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 S100A4P26447 101 aaKnown RBP1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 HIST1H2BBP33778 126 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 PPP1R2P41236 205 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 EMP1P54849 157 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 HIST1H2BDP58876 126 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 POLR2GP62487 172 aaKnown RBP eCLIP1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 HIST1H4AP62805 103 aaKnown RBP1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 HIST1H2BCP62807 126 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 RANP62826 216 aaKnown RBP1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 ZNF90Q03938 601 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 RELAQ04206 551 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 MIAQ16674 131 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 HIST2H2BEQ16778 126 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 ZNF181Q2M3W8 571 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 TMEM97Q5BJF2 176 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 PABPC1L2AQ5JQF8 200 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 AADACL3Q5VUY0 350 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 HCP5Q6MZN7 132 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 PPP1R2P3Q6NXS1 205 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 KTN1-AS1Q86SY8 53 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 CLVS1Q8IUQ0 354 aaPredicted RBP1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 TMEM86AQ8N2M4 240 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 TMEM86BQ8N661 226 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 ZNF283Q8N7M2 679 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 WFDC11Q8NEX6 87 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 CLDND2Q8NHS1 167 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 HIST1H2BHQ93079 126 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 HIST1H2BNQ99877 126 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 HIST1H2BMQ99879 126 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 C9orf16Q9BUW7 83 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 DCSTAMPQ9H295 470 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 CST9LQ9H4G1 147 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 C16orf95Q9H693 158 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 CISHQ9NSE2 258 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 SLC39A9Q9NUM3 307 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 C14orf105Q9NVL8 296 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 IL36BQ9NZH7 164 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 FBXO5Q9UKT4 447 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 ZSWIM8A7E2V4 1837 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 SIPA1L1O43166 1804 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 KIF13BQ9NQT8 1826 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 CCDC88AQ3V6T2 1871 aa1.16□□□□□ -2.22
RNU2-48P-201ENST00000410694 KDM5BQ9UGL1 1544 aa1.15□□□□□ -2.22
RNU2-48P-201ENST00000410694 DOCK6Q96HP0 2047 aa1.15□□□□□ -2.22
RNU2-48P-201ENST00000410694 A0A0J9YW62 118 aa1.15□□□□□ -2.23
RNU2-48P-201ENST00000410694 A0A1B0GVG6 124 aa1.15□□□□□ -2.23
RNU2-48P-201ENST00000410694 EXOC1LA0A1B0GW35 172 aa1.15□□□□□ -2.23
RNU2-48P-201ENST00000410694 ARRDC5A6NEK1 342 aa1.15□□□□□ -2.23
RNU2-48P-201ENST00000410694 FABP5P3A8MUU1 101 aa1.15□□□□□ -2.23
RNU2-48P-201ENST00000410694 ORC5O43913 435 aa1.15□□□□□ -2.23
RNU2-48P-201ENST00000410694 FADS1O60427 444 aa1.15□□□□□ -2.23
RNU2-48P-201ENST00000410694 BANF1O75531 89 aa1.15□□□□□ -2.23
RNU2-48P-201ENST00000410694 PRM2P04554 102 aa1.15□□□□□ -2.23
RNU2-48P-201ENST00000410694 MSMBP08118 114 aa1.15□□□□□ -2.23
RNU2-48P-201ENST00000410694 LGALS1P09382 135 aaKnown RBP1.15□□□□□ -2.23
RNU2-48P-201ENST00000410694 RBP1P09455 135 aa1.15□□□□□ -2.23
RNU2-48P-201ENST00000410694 CTXN2P0C2S0 81 aa1.15□□□□□ -2.23
RNU2-48P-201ENST00000410694 TRGC1P0CF51 173 aa1.15□□□□□ -2.23
RNU2-48P-201ENST00000410694 ZNF728P0DKX0 622 aa1.15□□□□□ -2.23
RNU2-48P-201ENST00000410694 RPS4Y1P22090 263 aaKnown RBP1.15□□□□□ -2.23
RNU2-48P-201ENST00000410694 HIST1H1TP22492 207 aaPredicted RBP1.15□□□□□ -2.23
RNU2-48P-201ENST00000410694 ERP29P30040 261 aaKnown RBP1.15□□□□□ -2.23
RNU2-48P-201ENST00000410694 RPL28P46779 137 aaKnown RBP1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms