RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 ERASQ7Z444 233 aa9.62□□□□□ -0.87
PRPF40A-202ENST00000410080 COL25A1Q9BXS0 654 aaPredicted RBP9.62□□□□□ -0.87
PRPF40A-202ENST00000410080 MARS2Q96GW9 593 aaKnown RBP9.61□□□□□ -0.87
PRPF40A-202ENST00000410080 SAP30O75446 220 aa9.61□□□□□ -0.87
PRPF40A-202ENST00000410080 A0A0U1RQV5 110 aa9.61□□□□□ -0.87
PRPF40A-202ENST00000410080 LNP1A1A4G5 178 aa9.61□□□□□ -0.87
PRPF40A-202ENST00000410080 IGF2P01344 180 aa9.61□□□□□ -0.87
PRPF40A-202ENST00000410080 ATOH7Q8N100 152 aa9.61□□□□□ -0.87
PRPF40A-202ENST00000410080 NCOR1O75376 2440 aa9.61□□□□□ -0.87
PRPF40A-202ENST00000410080 Q5PR19 223 aa9.61□□□□□ -0.87
PRPF40A-202ENST00000410080 BIVMQ86UB2 503 aa9.61□□□□□ -0.87
PRPF40A-202ENST00000410080 PPP1R27Q86WC6 154 aa9.61□□□□□ -0.87
PRPF40A-202ENST00000410080 OR51G1Q8NGK1 321 aa9.61□□□□□ -0.87
PRPF40A-202ENST00000410080 GP6Q9HCN6 339 aa9.61□□□□□ -0.87
PRPF40A-202ENST00000410080 MVDP53602 400 aa9.61□□□□□ -0.87
PRPF40A-202ENST00000410080 RIPPLY3P57055 190 aa9.61□□□□□ -0.87
PRPF40A-202ENST00000410080 TMEM167AQ8TBQ9 72 aa9.61□□□□□ -0.87
PRPF40A-202ENST00000410080 C1QAP02745 245 aa9.61□□□□□ -0.87
PRPF40A-202ENST00000410080 FAM27E3Q08E93 113 aa9.61□□□□□ -0.87
PRPF40A-202ENST00000410080 COX19Q49B96 90 aa9.61□□□□□ -0.87
PRPF40A-202ENST00000410080 FAM71F2Q6NXP2 309 aa9.61□□□□□ -0.87
PRPF40A-202ENST00000410080 OR10AG1Q8NH19 301 aa9.61□□□□□ -0.87
PRPF40A-202ENST00000410080 ASIPP42127 132 aa9.6□□□□□ -0.87
PRPF40A-202ENST00000410080 ZNF385CQ66K41 422 aaPredicted RBP9.6□□□□□ -0.87
PRPF40A-202ENST00000410080 ARPC1AQ92747 370 aa9.6□□□□□ -0.87
PRPF40A-202ENST00000410080 HSPB9Q9BQS6 159 aa9.6□□□□□ -0.87
PRPF40A-202ENST00000410080 SHANK1Q9Y566 2161 aa9.6□□□□□ -0.87
PRPF40A-202ENST00000410080 FAM74A7A6NL05 159 aa9.6□□□□□ -0.87
PRPF40A-202ENST00000410080 ZNF501Q96CX3 271 aaPredicted RBP9.6□□□□□ -0.87
PRPF40A-202ENST00000410080 ST6GAL2Q96JF0 529 aa9.6□□□□□ -0.87
PRPF40A-202ENST00000410080 ABHD1Q96SE0 405 aa9.6□□□□□ -0.87
PRPF40A-202ENST00000410080 CYB5R1Q9UHQ9 305 aa9.6□□□□□ -0.87
PRPF40A-202ENST00000410080 FREM1Q5H8C1 2179 aa9.6□□□□□ -0.87
PRPF40A-202ENST00000410080 COL4A1P02462 1669 aa9.6□□□□□ -0.87
PRPF40A-202ENST00000410080 NPBWR2P48146 333 aa9.6□□□□□ -0.87
PRPF40A-202ENST00000410080 CDC42EP3Q9UKI2 254 aa9.6□□□□□ -0.87
PRPF40A-202ENST00000410080 LEPROTL1O95214 131 aa9.6□□□□□ -0.87
PRPF40A-202ENST00000410080 IGKV1D-16P01601 117 aa9.6□□□□□ -0.87
PRPF40A-202ENST00000410080 IGHV4-39P01824 125 aa9.6□□□□□ -0.87
PRPF40A-202ENST00000410080 ICAM4Q14773 271 aa9.6□□□□□ -0.87
PRPF40A-202ENST00000410080 C7orf66A4D0T2 115 aa9.6□□□□□ -0.87
PRPF40A-202ENST00000410080 RRHO14718 337 aa9.6□□□□□ -0.87
PRPF40A-202ENST00000410080 ZNF506Q5JVG8 444 aa9.6□□□□□ -0.87
PRPF40A-202ENST00000410080 FBXL7Q9UJT9 491 aa9.6□□□□□ -0.87
PRPF40A-202ENST00000410080 BGLAPP02818 100 aa9.6□□□□□ -0.87
PRPF40A-202ENST00000410080 KIR3DL3Q8N743 410 aa9.6□□□□□ -0.87
PRPF40A-202ENST00000410080 OR1P1Q8NH06 330 aa9.6□□□□□ -0.87
PRPF40A-202ENST00000410080 SRXN1Q9BYN0 137 aa9.6□□□□□ -0.87
PRPF40A-202ENST00000410080 KIAA1549Q9HCM3 1950 aa9.6□□□□□ -0.87
PRPF40A-202ENST00000410080 HMGCLL1Q8TB92 370 aa9.59□□□□□ -0.87
PRPF40A-202ENST00000410080 GHRHP01286 108 aa9.59□□□□□ -0.87
PRPF40A-202ENST00000410080 CKS1BP61024 79 aa9.59□□□□□ -0.87
PRPF40A-202ENST00000410080 SLC25A45Q8N413 288 aa9.59□□□□□ -0.87
PRPF40A-202ENST00000410080 MRPL18Q9H0U6 180 aaKnown RBP9.59□□□□□ -0.87
PRPF40A-202ENST00000410080 TRAV8-6A0A0B4J262 113 aa9.59□□□□□ -0.87
PRPF40A-202ENST00000410080 MOSPD3O75425 235 aa9.59□□□□□ -0.87
PRPF40A-202ENST00000410080 CGB3P0DN86 165 aa9.59□□□□□ -0.87
PRPF40A-202ENST00000410080 PAPPA-AS1Q5QFB9 102 aa9.59□□□□□ -0.87
PRPF40A-202ENST00000410080 CST9LQ9H4G1 147 aa9.59□□□□□ -0.87
PRPF40A-202ENST00000410080 TMEM106BQ9NUM4 274 aa9.59□□□□□ -0.87
PRPF40A-202ENST00000410080 CENPVL1A0A0U1RR11 272 aa9.59□□□□□ -0.87
PRPF40A-202ENST00000410080 SAMD13Q5VXD3 122 aa9.59□□□□□ -0.87
PRPF40A-202ENST00000410080 OR9G1Q8NH87 305 aa9.59□□□□□ -0.87
PRPF40A-202ENST00000410080 KLK13Q9UKR3 277 aa9.59□□□□□ -0.87
PRPF40A-202ENST00000410080 RUNX1Q01196 453 aa9.59□□□□□ -0.87
PRPF40A-202ENST00000410080 NEU4Q8WWR8 484 aaPredicted RBP9.59□□□□□ -0.87
PRPF40A-202ENST00000410080 FBXL15Q9H469 300 aa9.59□□□□□ -0.87
PRPF40A-202ENST00000410080 KCNE5Q9UJ90 142 aa9.59□□□□□ -0.87
PRPF40A-202ENST00000410080 TNCP24821 2201 aa9.59□□□□□ -0.87
PRPF40A-202ENST00000410080 MARCH11A6NNE9 402 aa9.59□□□□□ -0.87
PRPF40A-202ENST00000410080 H0Y980 276 aa9.59□□□□□ -0.87
PRPF40A-202ENST00000410080 Q71RC1 249 aaPredicted RBP9.59□□□□□ -0.87
PRPF40A-202ENST00000410080 CYB561D1Q8N8Q1 229 aa9.59□□□□□ -0.87
PRPF40A-202ENST00000410080 CD24P25063 80 aa9.59□□□□□ -0.88
PRPF40A-202ENST00000410080 RFLNBQ8N5W9 214 aa9.59□□□□□ -0.88
PRPF40A-202ENST00000410080 LRTM2Q8N967 370 aa9.59□□□□□ -0.88
PRPF40A-202ENST00000410080 PARLQ9H300 379 aa9.59□□□□□ -0.88
PRPF40A-202ENST00000410080 CA11O75493 328 aa9.58□□□□□ -0.88
PRPF40A-202ENST00000410080 S100A7L2Q5SY68 101 aa9.58□□□□□ -0.88
PRPF40A-202ENST00000410080 FOXD3Q9UJU5 478 aaPredicted RBP9.58□□□□□ -0.88
PRPF40A-202ENST00000410080 ATP6V0CP27449 155 aa9.58□□□□□ -0.88
PRPF40A-202ENST00000410080 LHX2P50458 406 aa9.58□□□□□ -0.88
PRPF40A-202ENST00000410080 SCAND1P57086 179 aa9.58□□□□□ -0.88
PRPF40A-202ENST00000410080 UNC119Q13432 240 aa9.58□□□□□ -0.88
PRPF40A-202ENST00000410080 ASAH2BP0C7U1 165 aa9.58□□□□□ -0.88
PRPF40A-202ENST00000410080 ERGP11308 486 aa9.58□□□□□ -0.88
PRPF40A-202ENST00000410080 FAM3BP58499 235 aaPredicted RBP9.58□□□□□ -0.88
PRPF40A-202ENST00000410080 TMEM250H0YL14 139 aa9.58□□□□□ -0.88
PRPF40A-202ENST00000410080 PEX7O00628 323 aa9.58□□□□□ -0.88
PRPF40A-202ENST00000410080 FOXS1O43638 330 aa9.58□□□□□ -0.88
PRPF40A-202ENST00000410080 CEACAM1P13688 526 aa9.58□□□□□ -0.88
PRPF40A-202ENST00000410080 LBHQ53QV2 105 aaPredicted RBP9.58□□□□□ -0.88
PRPF40A-202ENST00000410080 C10orf111Q8N326 155 aa9.58□□□□□ -0.88
PRPF40A-202ENST00000410080 PRSS22Q9GZN4 317 aa9.58□□□□□ -0.88
PRPF40A-202ENST00000410080 ELOA3CA0A087WX78 387 aaPredicted RBP9.58□□□□□ -0.88
PRPF40A-202ENST00000410080 GALP22466 123 aa9.58□□□□□ -0.88
PRPF40A-202ENST00000410080 XAF1Q6GPH4 301 aa9.58□□□□□ -0.88
PRPF40A-202ENST00000410080 ZNF703Q9H7S9 590 aaPredicted RBP9.58□□□□□ -0.88
PRPF40A-202ENST00000410080 PTP4A3O75365 173 aa9.57□□□□□ -0.88
PRPF40A-202ENST00000410080 CRYBB3P26998 211 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms