RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 AP3S2P59780 193 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 HLA-DRB3P79483 266 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 AESQ08117 197 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 OXA1LQ15070 435 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 Q1RN00 199 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 C17orf58Q2M2W7 97 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 DEFB113Q30KQ7 82 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 ACTBL2Q562R1 376 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 AVPI1Q5T686 147 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 TRIQKQ629K1 86 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 WDR25Q64LD2 544 aaPredicted RBP3.19□□□□□ -1.9
CLK1-203ENST00000409769 STEAP1BQ6NZ63 245 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 C16orf87Q6PH81 154 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 GDPD3Q7L5L3 318 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 SLC36A1Q7Z2H8 476 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 LHFPL1Q86WI0 220 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 SPICQ8N5J4 248 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 C11orf42Q8N5U0 333 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 TPRX1Q8N7U7 411 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 ASCC1Q8N9N2 400 aaKnown RBP3.19□□□□□ -1.9
CLK1-203ENST00000409769 TMEM185AQ8NFB2 350 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 OR4K15Q8NH41 348 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 NEK7Q8TDX7 302 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 MAFIPQ8WZ33 124 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 RAB1CQ92928 201 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 MRGPRFQ96AM1 343 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 TIMD4Q96H15 378 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 SPAG8Q99932 426 aaPredicted RBP3.19□□□□□ -1.9
CLK1-203ENST00000409769 ST6GALNAC5Q9BVH7 336 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 ZNF286AQ9HBT8 521 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 IFT46Q9NQC8 304 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 SLC2A8Q9NY64 477 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 MIOXQ9UGB7 285 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 OPN4Q9UHM6 478 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 KIF25Q9UIL4 384 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 ANXA10Q9UJ72 324 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 UTP20O75691 2785 aaKnown RBP3.19□□□□□ -1.9
CLK1-203ENST00000409769 CRYBG3Q68DQ2 2970 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 UNC79Q9P2D8 2635 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 APCP25054 2843 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 CREBBPQ92793 2442 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 CSPG4Q6UVK1 2322 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 MEIKINA0A087WXM9 373 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 TRBV6-7A0A0A0MS04 114 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 TRAV39A0A0B4J263 110 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 KIR2DS1A0A191URI9 304 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 FUOMA2VDF0 154 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 ZNF729A6NN14 1252 aaPredicted RBP3.18□□□□□ -1.9
CLK1-203ENST00000409769 C17orf98A8MV24 154 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 TRDCB7Z8K6 153 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 KBTBD11O94819 623 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 NDUFB6O95139 128 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 VENTXO95231 258 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 RAB3DO95716 219 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 PTTG1O95997 202 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 IGHV2-5P01817 119 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 PMP2P02689 132 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 FCER2P06734 321 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 RPS2P15880 293 aaKnown RBP3.18□□□□□ -1.9
CLK1-203ENST00000409769 SPNP16150 400 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 SSTR5P35346 364 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 KIR2DS4P43632 304 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 TAS2R46P59540 309 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 DEFA1P59665 94 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 DEFA3P59666 94 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 MRPS15P82914 257 aaKnown RBP3.18□□□□□ -1.9
CLK1-203ENST00000409769 HTD2P86397 168 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 PAX2Q02962 417 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 MEF2CQ06413 473 aaPredicted RBP3.18□□□□□ -1.9
CLK1-203ENST00000409769 EDDM3AQ14507 147 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 KIR2DS1Q14954 304 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 CDK10Q15131 360 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 RGS21Q2M5E4 152 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 CHRFAM7AQ494W8 412 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 LRRC10Q5BKY1 277 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 RNASE10Q5GAN6 216 aaKnown RBP3.18□□□□□ -1.9
CLK1-203ENST00000409769 UTF1Q5T230 341 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 C6orf183Q5T699 404 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 AADACL3Q5VUY0 350 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 ZNF57Q68EA5 555 aaPredicted RBP3.18□□□□□ -1.9
CLK1-203ENST00000409769 CLEC2AQ6UVW9 174 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 H1FOOQ8IZA3 346 aaPredicted RBP3.18□□□□□ -1.9
CLK1-203ENST00000409769 ARRDC1Q8N5I2 433 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 DUSP18Q8NEJ0 188 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 OR8B3Q8NGG8 313 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 OR51S1Q8NGJ8 323 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 OR4A4PQ8NGN8 299 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 OR13C8Q8NGS7 320 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 OR5H2Q8NGV7 314 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 CLDND2Q8NHS1 167 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 GIMAP1Q8WWP7 306 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 UPRTQ96BW1 309 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 OR8B2Q96RD0 313 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 SLC6A7Q99884 636 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 TAF9BQ9HBM6 251 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 C19orf12Q9NSK7 152 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 NECAP2Q9NVZ3 263 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 TAS2R3Q9NYW6 316 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 JPT1Q9UK76 154 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 TRAPPC2LQ9UL33 140 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms